Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 2.3e-128 462.2 229 100.0
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 7.8e-121 437.2 228 91.7
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 5.1e-120 434.5 228 91.7
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 3.3e-119 431.8 228 94.3
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 9.6e-119 430.3 228 93.9
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 9.6e-119 430.3 228 93.9
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 1.3e-118 429.9 228 93.4
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 1.3e-118 429.9 228 93.4
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 6.2e-118 427.6 228 92.5
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 8.1e-118 427.2 228 93.0
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 2.6e-116 422.2 229 92.1
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 2.6e-116 422.2 228 90.8
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 2.4e-109 399.1 232 86.2
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 1.3e-104 383.3 225 82.2
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 4.0e-101 371.7 225 79.6
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 2.6e-100 369.0 226 78.8
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 2.6e-100 369.0 225 78.7
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 3.4e-100 368.6 228 79.8
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.8e-99 365.2 225 76.4
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 8.4e-99 364.0 228 79.4
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.9e-98 362.8 225 75.6
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 3.2e-98 362.1 225 78.7
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 4.2e-98 361.7 225 79.1
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 9.3e-98 360.5 225 75.1
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.3e-98 360.5 225 75.6
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.3e-98 360.5 225 75.6
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 1.6e-97 359.8 226 77.4
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 1.6e-97 359.8 225 76.9
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.6e-97 359.8 225 78.2
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 2.1e-97 359.4 225 79.1
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 2.1e-97 359.4 225 79.6
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.7e-97 359.0 228 76.8
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 4.6e-97 358.2 225 77.3
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.0e-96 357.1 225 77.3
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 1.0e-96 357.1 225 78.2
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 1.3e-96 356.7 227 75.8
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 1.8e-96 356.3 225 75.6
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 3.9e-96 355.1 225 76.4
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 6.7e-96 354.4 225 76.4
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.5e-95 353.2 225 78.2
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.9e-95 352.8 251 70.5
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 9.7e-95 350.5 226 76.1
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 2.2e-94 349.4 223 75.8
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 2.4e-93 345.9 226 75.7
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 6.9e-93 344.4 226 74.3
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 9.0e-93 344.0 225 74.2
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 9.0e-93 344.0 226 73.9
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 1.2e-92 343.6 226 72.6
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 1.2e-92 343.6 225 72.9
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.5e-92 343.2 225 73.8
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.5e-92 343.2 225 73.8
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.5e-92 343.2 227 74.9
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.0e-92 342.8 225 74.7
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 3.4e-92 342.0 225 72.9
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 3.4e-92 342.0 229 73.8
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 7.7e-92 340.9 229 71.6
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 7.7e-92 340.9 233 71.2
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 1.3e-91 340.1 232 71.1
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.3e-91 340.1 233 73.0
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.7e-91 339.7 225 71.6
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.7e-91 339.7 230 73.5
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 2.9e-91 339.0 230 74.3
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 3.8e-91 338.6 229 72.9
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 8.5e-91 337.4 223 71.3
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 1.4e-90 336.7 225 72.0
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 1.9e-90 336.3 225 73.3
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 4.2e-90 335.1 225 71.6
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 4.2e-90 335.1 231 71.9
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 7.2e-90 334.3 240 69.2
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.2e-89 333.6 229 69.9
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 4.6e-89 331.6 225 70.7
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 6.1e-89 331.3 211 75.4
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 1.4e-88 330.1 225 70.2
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 1.8e-88 329.7 261 64.0
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 5.1e-88 328.2 225 70.2
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 5.1e-88 328.2 234 69.7
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 2.0e-87 326.2 253 66.8
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 2.5e-87 325.9 230 69.6
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 3.3e-87 325.5 246 65.0
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 1.7e-86 323.2 216 73.6
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 2.2e-86 322.8 208 73.1
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 2.2e-86 322.8 209 74.2
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 9.1e-85 317.4 210 72.4
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 1.5e-84 316.6 225 71.1
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 5.9e-84 314.7 209 72.7
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 2.9e-83 312.4 230 68.7
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 8.5e-83 310.8 225 69.3
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 1.6e-81 306.6 211 70.1
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.0e-80 303.9 208 69.7
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.1e-79 300.4 223 66.8
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 2.0e-79 299.7 236 65.7
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 3.3e-79 298.9 227 67.0
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.5e-76 290.0 239 62.3
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.2e-73 280.4 153 85.0
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 3.6e-73 278.9 209 68.9
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 5.2e-72 275.0 176 73.9
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.2e-70 269.6 175 70.3
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 2.2e-70 269.6 176 74.4
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 5.3e-69 265.0 226 61.9
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 7.0e-69 264.6 236 59.7
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 2.2e-67 259.6 226 57.5
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 6.8e-64 248.1 147 78.2
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.6e-63 246.1 211 62.6
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 9.7e-63 244.2 331 44.4
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 6.3e-62 241.5 226 55.3
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 1.8e-61 240.0 174 62.1
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.0e-59 234.2 225 56.4
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 5.0e-59 231.9 156 70.5
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 1.6e-57 226.9 145 77.9
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 2.7e-57 226.1 123 84.6
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 7.7e-52 208.0 135 66.7
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.3e-43 180.6 174 52.9
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 1.6e-41 173.7 134 61.9
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 1.3e-38 164.1 168 48.2
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.9e-29 133.7 63 95.2
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 7.3e-26 121.7 86 64.0
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 6.2e-25 118.6 63 79.4
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.4e-24 117.5 68 83.8
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 2.9e-22 109.8 142 45.1
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.4e-21 105.5 90 57.8
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.0e-19 101.3 118 48.3


User provided reference genes

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