Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 7.1e-165 583.9 314 100.0
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.9e-146 522.7 310 89.4
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 4.3e-138 495.0 317 85.2
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 1.3e-129 466.8 317 80.4
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 2.4e-128 462.6 317 81.1
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 4.1e-128 461.8 312 80.1
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 5.3e-128 461.5 320 79.7
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 4.5e-127 458.4 308 80.2
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 7.7e-127 457.6 308 80.2
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 1.4e-123 446.8 317 77.6
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 2.3e-123 446.0 317 77.3
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 1.3e-121 440.3 309 77.7
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 6.3e-121 438.0 309 77.0
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.7e-105 386.7 319 67.1
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.8e-104 383.3 317 68.8
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.4e-91 340.5 284 65.8
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 7.6e-66 255.0 337 48.1
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 8.4e-65 251.5 286 50.0
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 3.5e-63 246.1 286 49.0
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 7.8e-63 245.0 292 49.3
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.0e-62 244.6 286 48.6
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 5.1e-62 242.3 298 47.0
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 5.1e-62 242.3 338 42.9
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 5.1e-62 242.3 277 49.1
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 2.5e-61 240.0 260 56.2
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 5.6e-61 238.8 310 46.1
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 6.2e-60 235.3 308 46.4
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 8.1e-60 235.0 335 43.6
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.4e-59 234.2 269 49.4
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 2.4e-59 233.4 261 54.8
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 6.9e-59 231.9 315 42.5
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 1.2e-58 231.1 310 42.9
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 7.6e-58 228.4 289 46.4
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 1.3e-57 227.6 338 43.2
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 1.7e-57 227.3 288 46.5
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 4.9e-57 225.7 318 47.5
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.4e-56 224.2 312 42.6
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 3.2e-56 223.0 280 46.8
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 2.1e-55 220.3 264 45.5
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 3.5e-55 219.5 311 46.6
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 3.5e-55 219.5 299 45.5
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 6.0e-55 218.8 300 43.7
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 7.9e-55 218.4 308 42.5
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 7.9e-55 218.4 313 42.8
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.0e-54 218.0 312 42.0
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 1.0e-54 218.0 305 43.6
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.7e-54 217.2 310 40.6
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 1.7e-54 217.2 307 41.7
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 3.0e-54 216.5 310 42.6
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 3.9e-54 216.1 310 41.0
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 5.1e-54 215.7 269 45.7
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 6.6e-54 215.3 321 40.5
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 8.7e-54 214.9 300 41.3
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 1.1e-53 214.5 302 44.7
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.1e-53 214.5 299 42.1
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.5e-53 214.2 306 42.2
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 2.5e-53 213.4 310 42.6
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 3.3e-53 213.0 310 41.6
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 4.3e-53 212.6 348 37.6
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 4.3e-53 212.6 307 42.3
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 7.4e-53 211.8 308 41.6
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 9.6e-53 211.5 277 45.1
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.3e-52 211.1 308 44.5
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 1.6e-52 210.7 319 42.6
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.6e-52 210.7 321 39.6
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 2.8e-52 209.9 312 43.3
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 2.8e-52 209.9 306 43.1
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 4.8e-52 209.1 305 42.6
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 2.4e-51 206.8 308 41.2
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 6.9e-51 205.3 309 42.4
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 1.2e-50 204.5 303 40.6
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 1.5e-50 204.1 311 41.2
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 2.6e-50 203.4 324 41.0
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 4.5e-50 202.6 337 37.7
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 7.6e-50 201.8 308 41.2
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 9.9e-50 201.4 312 40.1
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.7e-49 200.7 295 40.3
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 2.2e-49 200.3 309 39.5
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.8e-49 199.5 312 39.7
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 4.9e-49 199.1 302 41.1
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 6.4e-49 198.7 311 40.5
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 8.4e-49 198.4 258 42.6
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.1e-48 198.0 300 41.0
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 2.4e-48 196.8 304 40.1
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 5.5e-48 195.7 304 41.1
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 5.5e-48 195.7 274 42.3
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 7.1e-48 195.3 297 42.4
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 9.3e-48 194.9 293 41.0
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 9.3e-48 194.9 275 41.8
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 9.3e-48 194.9 308 38.6
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 4.6e-47 192.6 317 39.7
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 6.0e-47 192.2 311 40.5
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.3e-46 191.0 226 44.7
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 1.8e-46 190.7 313 39.9
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 1.8e-46 190.7 312 38.1
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 6.7e-46 188.7 307 37.5
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 1.5e-45 187.6 312 36.5
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 1.5e-45 187.6 303 39.9
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.9e-45 187.2 317 38.8
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 3.3e-45 186.4 229 41.5
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 4.3e-45 186.0 302 39.1
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 7.4e-45 185.3 330 38.2
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.1e-44 183.7 253 40.3
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 2.1e-44 183.7 292 40.8
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 3.7e-44 183.0 313 37.7
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 4.8e-44 182.6 314 38.9
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 1.1e-43 181.4 324 38.9
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 2.4e-43 180.3 311 37.9
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 3.1e-43 179.9 304 38.2
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 1.2e-42 177.9 279 39.8
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 1.0e-41 174.9 366 33.9
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 1.3e-41 174.5 188 55.3
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.7e-41 174.1 276 37.7
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 2.9e-41 173.3 328 34.5
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 6.5e-41 172.2 298 38.9
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 5.5e-40 169.1 201 52.2
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 9.3e-40 168.3 277 40.8
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 4.6e-39 166.0 234 41.5
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 7.9e-39 165.2 311 39.5
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 1.5e-37 161.0 242 42.6
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 6.3e-36 155.6 191 42.9
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.4e-35 154.5 304 37.8
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 2.6e-34 150.2 309 35.6
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 5.5e-32 142.5 218 39.0
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 7.2e-32 142.1 234 38.5
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 9.3e-32 141.7 234 38.5
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 1.6e-31 141.0 305 34.4
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.1e-31 140.6 270 34.4
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 1.3e-30 137.9 309 33.0
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 1.3e-30 137.9 193 41.5
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.3e-30 137.9 137 46.0
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 3.9e-30 136.3 255 34.1
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 2.5e-29 133.7 221 36.2
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 2.8e-28 130.2 252 36.5
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.4e-27 127.1 218 36.2
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.5e-26 124.4 289 32.5
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 1.1e-24 118.2 147 45.6
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.4e-22 111.3 301 31.2
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 3.9e-22 109.8 204 32.8
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 3.7e-20 103.2 288 28.8
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 1.3e-17 94.7 136 41.2
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 2.9e-17 93.6 146 37.7
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 1.4e-16 91.3 179 33.0
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 1.4e-11 74.7 149 34.9
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 7.0e-11 72.4 93 46.2
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 7.0e-11 72.4 189 29.1
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.3e-09 68.2 87 35.6
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.7e-09 67.8 221 25.8
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 2.7e-07 60.5 61 41.0
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 1.0e-06 58.5 195 25.1


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