Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 2.9e-163 578.6 308 100.0
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 7.3e-122 441.0 276 87.3
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 4.0e-112 408.7 309 79.0
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 1.7e-110 403.3 301 78.1
Carub.0005s1399 Capsella rubella HOM05D006327 ORTHO05D007952 1.9e-106 389.8 308 76.3
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 9.6e-106 387.5 279 81.0
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 4.8e-105 385.2 279 79.2
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 6.2e-105 384.8 280 79.3
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 3.2e-101 372.5 302 74.2
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.5e-95 353.6 284 74.3
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 3.2e-93 345.9 284 73.6
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 6.7e-91 338.2 277 73.6
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 3.9e-83 312.4 292 68.2
BcaB05g23082 Brassica carinata HOM05D006327 ORTHO05D007952 5.0e-62 242.3 254 62.2
THA.LOC104818247 Tarenaya hassleriana HOM05D006327 ORTHO05D007952 3.0e-59 233.0 287 55.7
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 5.2e-59 232.3 324 50.9
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 4.8e-41 172.6 302 46.0
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 1.4e-40 171.0 307 44.6
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 7.0e-40 168.7 303 42.9
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 7.0e-40 168.7 301 43.2
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 9.1e-40 168.3 301 42.2
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 1.2e-39 167.9 324 41.7
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 1.6e-39 167.5 305 43.9
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 4.5e-39 166.0 296 42.2
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 5.9e-39 165.6 305 42.3
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 2.3e-38 163.7 292 42.8
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 2.9e-38 163.3 301 42.5
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 3.8e-38 162.9 307 42.7
Hund09383 Selenicereus undatus HOM05D006327 ORTHO05D007952 3.8e-38 162.9 294 44.9
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 6.6e-38 162.2 295 43.1
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 2.5e-37 160.2 306 41.5
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 3.3e-37 159.8 293 43.0
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 5.5e-37 159.1 295 43.1
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 9.5e-37 158.3 308 41.2
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 1.2e-36 157.9 295 42.0
Thecc.K0000500 Theobroma cacao HOM05D006327 ORTHO05D007952 1.6e-36 157.5 296 42.2
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 2.8e-36 156.8 309 42.1
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 6.1e-36 155.6 308 41.2
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 3.0e-35 153.3 299 42.5
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 5.2e-35 152.5 304 39.1
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 1.5e-34 151.0 303 38.9
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 2.0e-34 150.6 302 39.4
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 2.6e-34 150.2 293 41.3
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 5.7e-34 149.1 304 39.8
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 1.3e-33 147.9 293 41.3
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.2e-33 147.1 308 41.6
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 3.7e-33 146.4 302 41.7
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 4.9e-33 146.0 318 38.4
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 6.3e-33 145.6 293 38.9
EL10Ac5g10880 Beta vulgaris HOM05D006327 ORTHO05D007952 1.4e-32 144.4 318 41.5
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.8e-32 144.1 309 41.4
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.4e-32 143.7 301 42.9
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 2.4e-32 143.7 292 39.7
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 5.4e-32 142.5 300 41.7
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 5.4e-32 142.5 293 38.9
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 7.0e-32 142.1 282 38.7
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 1.2e-31 141.4 306 39.2
TPR.G11929 Trifolium pratense HOM05D006327 ORTHO05D007952 1.2e-31 141.4 293 41.3
Nitab4.5_0000758g0030 Nicotiana tabacum HOM05D006327 ORTHO05D007952 2.0e-31 140.6 296 38.5
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 3.5e-31 139.8 318 37.4
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 4.5e-31 139.4 372 36.3
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 7.8e-31 138.7 291 39.9
Hma1.2p1_0572F.1_g181140 Hydrangea macrophylla HOM05D006327 ORTHO05D007952 1.7e-30 137.5 322 37.9
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 1.7e-30 137.5 293 38.9
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 2.3e-30 137.1 302 41.4
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 6.6e-30 135.6 302 41.4
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 8.6e-30 135.2 295 38.6
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 1.1e-29 134.8 316 37.7
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 1.5e-29 134.4 319 36.7
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 1.9e-29 134.0 304 38.2
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 4.3e-29 132.9 294 40.8
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 1.2e-28 131.3 286 39.2
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 4.7e-28 129.4 286 38.8
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.0e-28 128.6 327 38.8
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 1.4e-27 127.9 304 38.5
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 5.2e-27 125.9 296 39.5
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 1.5e-26 124.4 391 32.2
Ah.02g112960 Amaranthus hybridus HOM05D006327 ORTHO05D007952 7.5e-26 122.1 315 36.8
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 7.5e-26 122.1 279 38.4
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 3.7e-25 119.8 280 37.1
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 6.4e-25 119.0 304 34.9
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 4.1e-24 116.3 296 35.5
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 1.2e-23 114.8 341 32.6
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 1.2e-23 114.8 282 35.8
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 1.2e-23 114.8 295 34.6
ECA247G1897 Erigeron canadensis HOM05D006327 ORTHO05D007881 1.6e-23 114.4 298 35.6
PSO832G2780 Papaver somniferum HOM05D006327 ORTHO05D007952 4.6e-23 112.8 330 32.4
PSO591G0157 Papaver somniferum HOM05D006327 ORTHO05D007952 1.2e-20 104.8 333 32.7
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 2.1e-20 104.0 277 36.1
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 2.8e-20 103.6 211 37.4
CDE06G0071 Ceratophyllum demersum HOM05D006327 ORTHO05D007952 3.4e-18 96.7 285 34.0
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 5.8e-18 95.9 305 32.8
Atru.chr9.2360 Acer truncatum HOM05D006327 ORTHO05D007952 1.7e-17 94.4 159 49.7
Cc04_g16010 Coffea canephora HOM05D006327 ORTHO05D007952 1.7e-17 94.4 328 33.2
HPP92_015918 Vanilla planifolia HOM05D006327 ORTHO05D007952 1.7e-17 94.4 310 32.9
HPP92_015937 Vanilla planifolia HOM05D006327 ORTHO05D007952 8.3e-17 92.0 302 32.8
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 1.5e-13 81.3 81 54.3
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.3e-13 79.7 67 59.7
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.6e-13 79.3 67 59.7
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 7.3e-13 79.0 56 64.3
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 9.5e-13 78.6 53 66.0
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.2e-12 78.2 67 58.2
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 2.1e-12 77.4 283 30.4
SGA_v2.0_scaffold25G10883 Striga asiatica HOM05D006327 ORTHO05D007952 2.1e-12 77.4 286 30.8
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.2e-12 75.9 67 58.2
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.2e-12 75.9 67 56.7
Hund02693 Selenicereus undatus HOM05D006327 ORTHO05D007952 6.2e-12 75.9 288 31.9
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.1e-11 75.1 67 56.7
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.1e-11 75.1 67 56.7
Sc12g0005960 Simmondsia chinensis HOM05D006327 ORTHO05D007952 2.3e-11 73.9 55 61.8
ATR0665G641 Amborella trichopoda HOM05D006327 ORTHO05D007952 8.9e-11 72.0 52 57.7
Zm00001eb053670 Zea mays HOM05D006327 ORTHO05D007952 1.2e-10 71.6 251 31.1
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 3.4e-10 70.1 205 34.1
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 4.9e-09 66.2 103 39.8
Sc12g0005950 Simmondsia chinensis HOM05D006327 ORTHO05D007952 4.9e-09 66.2 316 28.2
SMO361G0693 Selaginella moellendorffii HOM05D006327 ORTHO05D007952 9.2e-08 62.0 211 29.4
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 1.7e-06 57.8 52 59.6


User provided reference genes

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