Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10010423m.g Eutrema salsugineum HOM05D006541 ORTHO05D008471 2.8e-230 801.6 406 100.0
Sp5g14300 Schrenkiella parvula HOM05D006541 ORTHO05D008471 1.5e-207 726.1 406 92.1
AL5G26900 Arabidopsis lyrata HOM05D006541 ORTHO05D008471 1.8e-205 719.2 413 89.6
CARHR156290 Cardamine hirsuta HOM05D006541 ORTHO05D008471 2.0e-204 715.7 408 89.7
AT3G47610 Arabidopsis thaliana HOM05D006541 ORTHO05D008471 5.9e-204 714.1 413 89.1
Carub.0005s1374 Capsella rubella HOM05D006541 ORTHO05D008471 1.5e-202 709.5 413 88.1
BolC3t19470H Brassica oleracea HOM05D006541 ORTHO05D008471 7.2e-202 707.2 406 88.9
A06p20010 Brassica napus HOM05D006541 ORTHO05D008471 6.1e-201 704.1 406 89.4
BraA06t25087Z Brassica rapa HOM05D006541 ORTHO05D008471 6.1e-201 704.1 406 89.4
BcaC01g01798 Brassica carinata HOM05D006541 ORTHO05D008471 2.3e-200 702.2 406 88.4
C03p71820 Brassica napus HOM05D006541 ORTHO05D008471 2.3e-200 702.2 406 88.4
BcaB01g00902 Brassica carinata HOM05D006541 ORTHO05D008471 3.0e-200 701.8 397 90.4
THA.LOC104821445 Tarenaya hassleriana HOM05D006541 ORTHO05D008471 9.2e-173 610.5 428 74.5
BcaB05g23063 Brassica carinata HOM05D006541 ORTHO05D008471 1.3e-171 606.7 398 79.4
Aa31LG4G16360 Aethionema arabicum HOM05D006541 ORTHO05D008471 1.1e-152 543.9 460 66.1
Dinv38701 Davidia involucrata HOM05D006541 ORTHO05D008471 9.3e-141 504.2 419 64.2
QL10p016702 Quercus lobata HOM05D006541 ORTHO05D008471 7.8e-140 501.1 432 63.2
TAR629G1448 Trochodendron aralioides HOM05D006541 ORTHO05D008471 3.3e-138 495.7 424 63.0
Atru.chr9.2260 Acer truncatum HOM05D006541 ORTHO05D008471 9.6e-138 494.2 399 63.9
PGR083G1696 Punica granatum HOM05D006541 ORTHO05D008471 2.8e-137 492.7 415 62.2
Cfa018953 Carpinus fangiana HOM05D006541 ORTHO05D008471 1.1e-136 490.7 400 65.8
Eucgr.B00491 Eucalyptus grandis HOM05D006541 ORTHO05D008471 1.8e-136 490.0 421 62.5
Prupe.5G192200 Prunus persica HOM05D006541 ORTHO05D008471 3.1e-136 489.2 426 62.9
Duzib205G0457 Durio zibethinus HOM05D006541 ORTHO05D008471 6.9e-136 488.0 399 64.2
Gohir.A03G066400 Gossypium hirsutum HOM05D006541 ORTHO05D008471 2.9e-134 482.6 399 63.7
MD14G1199100 Malus domestica HOM05D006541 ORTHO05D008471 6.4e-134 481.5 426 61.0
GSVIVG01008019001 Vitis vinifera HOM05D006541 ORTHO05D008471 6.4e-134 481.5 419 60.6
Thecc.03G085100 Theobroma cacao HOM05D006541 ORTHO05D008471 1.4e-133 480.3 401 63.6
TAR371G1054 Trochodendron aralioides HOM05D006541 ORTHO05D008471 1.9e-133 479.9 386 64.2
MBI05_g08285_MAGBIO Magnolia biondii HOM05D006541 ORTHO05D008471 2.4e-133 479.6 422 61.6
Ciclev10020397m.g Citrus clementina HOM05D006541 ORTHO05D008471 5.4e-133 478.4 413 62.5
CiPaw.11G043400 Carya illinoinensis HOM05D006541 ORTHO05D008471 7.1e-133 478.0 388 64.4
Psat4g051480 Pisum sativum HOM05D006541 ORTHO05D008471 1.6e-132 476.9 435 60.0
Gohir.D03G093000 Gossypium hirsutum HOM05D006541 ORTHO05D008471 2.7e-132 476.1 388 64.7
FAN04G2599 Fragaria x ananassa HOM05D006541 ORTHO05D008471 7.9e-132 474.6 427 59.7
TWI60G0844 Tripterygium wilfordii HOM05D006541 ORTHO05D008471 1.0e-131 474.2 401 64.1
Lj5A111T86 Lonicera japonica HOM05D006541 ORTHO05D008471 1.8e-131 473.4 391 63.2
RcHm_v2.0_Chr7g0181151 Rosa chinensis HOM05D006541 ORTHO05D008471 1.8e-131 473.4 428 60.5
Nn4g23149 Nelumbo nucifera HOM05D006541 ORTHO05D008471 6.7e-131 471.5 419 59.2
Phvul.003G190700 Phaseolus vulgaris HOM05D006541 ORTHO05D008471 1.1e-130 470.7 436 59.6
Ca_21826_v3 Cicer arietinum L. HOM05D006541 ORTHO05D008471 1.9e-130 469.9 429 59.2
VMungo1215G1397 Vigna mungo HOM05D006541 ORTHO05D008471 1.9e-130 469.9 437 59.0
AUR62008395 Chenopodium quinoa HOM05D006541 ORTHO05D008471 4.3e-130 468.8 412 59.7
FAN18G0374 Fragaria x ananassa HOM05D006541 ORTHO05D008471 4.3e-130 468.8 430 59.1
Hund02657 Selenicereus undatus HOM05D006541 ORTHO05D008471 4.3e-130 468.8 411 61.6
Hma1.2p1_0104F.1_g049970 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 5.6e-130 468.4 382 64.9
AUR62021701 Chenopodium quinoa HOM05D006541 ORTHO05D008471 1.6e-129 466.8 412 60.4
Glyma.17G099300 Glycine max HOM05D006541 ORTHO05D008471 4.8e-129 465.3 435 58.4
Gorai.003G096900 Gossypium raimondii HOM05D006541 ORTHO05D008471 6.2e-129 464.9 432 58.8
FAN08G2919 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.1e-128 462.6 427 59.0
Cc04_g16740 Coffea canephora HOM05D006541 ORTHO05D008471 6.9e-128 461.5 382 62.0
MD06G1192400 Malus domestica HOM05D006541 ORTHO05D008471 6.9e-128 461.5 454 57.3
TPR.G34732 Trifolium pratense HOM05D006541 ORTHO05D008471 1.5e-127 460.3 435 57.7
Medtr4g108590 Medicago truncatula HOM05D006541 ORTHO05D008471 2.6e-127 459.5 431 58.9
CAN.G837.10 Capsicum annuum HOM05D006541 ORTHO05D008471 7.6e-127 458.0 435 58.2
FvH4_5g15050 Fragaria vesca HOM05D006541 ORTHO05D008471 7.6e-127 458.0 430 58.6
Lj4g0004556 Lotus japonicus HOM05D006541 ORTHO05D008471 1.1e-125 454.1 399 59.6
Lalb_Chr07g0178001 Lupinus albus HOM05D006541 ORTHO05D008471 3.2e-125 452.6 390 63.1
PSO063G0566 Papaver somniferum HOM05D006541 ORTHO05D008471 9.3e-125 451.1 420 57.6
Nitab4.5_0000842g0050 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.2e-124 450.7 436 56.0
Nitab4.5_0012137g0020 Nicotiana tabacum HOM05D006541 ORTHO05D008471 1.2e-124 450.7 437 56.1
Rhsim08G0155500 Rhododendron simsii HOM05D006541 ORTHO05D008471 1.2e-124 450.7 361 64.8
arahy.Tifrunner.gnm1.ann1.84ES4F Arachis hypogaea HOM05D006541 ORTHO05D008471 1.6e-124 450.3 434 57.4
arahy.Tifrunner.gnm1.ann1.ZY6HCY Arachis hypogaea HOM05D006541 ORTHO05D008471 2.7e-124 449.5 434 57.4
HanXRQChr02g0041061 Helianthus annuus HOM05D006541 ORTHO05D008471 2.7e-124 449.5 376 62.5
Lsat_1_v5_gn_1_13281 Lactuca sativa HOM05D006541 ORTHO05D008471 7.9e-124 448.0 378 64.0
Peaxi162Scf00274g00732 Petunia axillaris HOM05D006541 ORTHO05D008471 7.9e-124 448.0 438 56.8
Aqoxy3G03367 Aquilegia oxysepala HOM05D006541 ORTHO05D008471 2.3e-123 446.4 424 58.3
Oeu006508.1 Olea europaea HOM05D006541 ORTHO05D008471 8.7e-123 444.5 385 61.3
DCAR_016545 Daucus carota HOM05D006541 ORTHO05D008471 3.3e-122 442.6 389 60.7
Solyc03g116140.3 Solanum lycopersicum HOM05D006541 ORTHO05D008471 3.3e-122 442.6 394 60.4
Ah.11g048540 Amaranthus hybridus HOM05D006541 ORTHO05D008471 9.6e-122 441.0 380 61.3
Actinidia37633 Actinidia chinensis HOM05D006541 ORTHO05D008471 8.2e-121 438.0 379 61.2
HPP92_016797 Vanilla planifolia HOM05D006541 ORTHO05D008471 6.9e-120 434.9 414 57.7
MSTRG.11386 Avicennia marina HOM05D006541 ORTHO05D008471 9.0e-120 434.5 380 61.1
Sopen03g035110 Solanum pennellii HOM05D006541 ORTHO05D008471 1.2e-119 434.1 395 59.5
Migut.I00173 Erythranthe guttata HOM05D006541 ORTHO05D008471 3.4e-119 432.6 382 63.1
HPP92_016827 Vanilla planifolia HOM05D006541 ORTHO05D008471 5.8e-119 431.8 414 57.5
CANSAT25G3319 Cannabis sativa HOM05D006541 ORTHO05D008471 2.2e-118 429.9 440 53.9
EL10Ac5g10987 Beta vulgaris HOM05D006541 ORTHO05D008471 2.9e-118 429.5 382 59.4
CSS0004518 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 2.9e-118 429.5 410 58.8
Potri.012G068900 Populus trichocarpa HOM05D006541 ORTHO05D008471 2.9e-118 429.5 392 60.5
PGSC0003DMG400019513 Solanum tuberosum HOM05D006541 ORTHO05D008471 1.1e-117 427.6 395 58.5
Haze_07335 Corylus avellana HOM05D006541 ORTHO05D008471 4.2e-117 425.6 387 61.0
ECA247G0129 Erigeron canadensis HOM05D006541 ORTHO05D008471 4.2e-117 425.6 382 59.2
Sc12g0006320 Simmondsia chinensis HOM05D006541 ORTHO05D008471 5.5e-117 425.2 413 57.6
SGA_v2.0_scaffold25G10913 Striga asiatica HOM05D006541 ORTHO05D008471 7.1e-117 424.9 385 59.7
CSS0042048 Camellia sinensis var. sinensis HOM05D006541 ORTHO05D008471 6.0e-116 421.8 399 59.9
CDE06G2127 Ceratophyllum demersum HOM05D006541 ORTHO05D008471 2.2e-113 413.3 430 53.0
ATR0598G034 Amborella trichopoda HOM05D006541 ORTHO05D008471 2.4e-112 409.8 383 57.7
Sabra12G0049100 Salix brachista HOM05D006541 ORTHO05D008471 4.1e-112 409.1 466 51.3
CsaV3_1G005390 Cucumis sativus L. HOM05D006541 ORTHO05D008471 1.5e-111 407.1 373 59.5
ClCG04G012330 Citrullus lanatus HOM05D006541 ORTHO05D008471 4.5e-111 405.6 357 61.9
Cpa.g.c35819 Carica papaya HOM05D006541 ORTHO05D008471 5.9e-111 405.2 364 61.8
MELO3C001974.2 Cucumis melo HOM05D006541 ORTHO05D008471 3.8e-110 402.5 366 60.4
Manes.06G093400 Manihot esculenta HOM05D006541 ORTHO05D008471 7.2e-109 398.3 364 60.7
COL.COLO4_24520 Corchorus olitorius HOM05D000087 ORTHO05D008471 2.7e-108 396.4 389 58.9
Sed0004898 Sechium edule HOM05D006541 ORTHO05D008471 6.3e-105 385.2 343 63.3
unitig_0.g2528 Utricularia gibba HOM05D006541 ORTHO05D008471 2.4e-104 383.3 375 55.7
Hma1.2p1_0104F.1_g049980 Hydrangea macrophylla HOM05D006541 ORTHO05D008471 8.5e-102 374.8 339 62.8
vmacro17549 Vaccinium macrocarpon HOM05D006541 ORTHO05D008471 4.4e-98 362.5 407 51.8
Zm00001eb312480 Zea mays HOM05D006541 ORTHO05D008471 4.2e-85 319.3 293 58.0
Actinidia04898 Actinidia chinensis HOM05D006541 ORTHO05D008471 2.8e-81 306.6 244 64.8
Mapoly0060s0059 Marchantia polymorpha HOM05D006541 ORTHO05D003603 1.6e-76 290.8 397 44.6
SEGI_30902 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 2.1e-76 290.4 354 50.3
Pp3c16_180 Physcomitrium patens HOM05D006541 ORTHO05D003603 2.6e-74 283.5 395 44.3
Pp3c16_188 Physcomitrium patens HOM05D006541 ORTHO05D003603 2.6e-74 283.5 395 44.3
AagrBONN_evm.TU.Sc2ySwM_228.4960 Anthoceros agrestis HOM05D006541 ORTHO05D008471 3.4e-74 283.1 397 44.8
Potri.003G168100 Populus trichocarpa HOM05D006541 ORTHO05D008471 6.8e-67 258.8 166 80.7
CBR_g8828 Chara braunii HOM05D003341 ORTHO05D003603 8.6e-38 162.2 379 32.2
Cpa.g.sc111.3 Carica papaya HOM05D006541 ORTHO05D008471 8.4e-33 145.6 122 63.1
Os09g0413100 Oryza sativa ssp. japonica HOM05D006541 ORTHO05D008471 3.2e-32 143.7 190 47.4
SEGI_16548 Sequoiadendron giganteum HOM05D003341 ORTHO05D003603 5.4e-32 142.9 339 32.4
Actinidia04899 Actinidia chinensis HOM05D006541 ORTHO05D008471 4.6e-31 139.8 133 56.4
Sed0007979 Sechium edule HOM05D006541 ORTHO05D008471 4.0e-19 100.1 111 54.1
Cre09.g412350 Chlamydomonas reinhardtii HOM05D003341 ORTHO05D003603 6.4e-17 92.8 190 35.3
PRCOL_00002459 Prasinoderma coloniale HOM05D006541 ORTHO05D008471 4.2e-16 90.1 141 40.4
vmacro17551 Vaccinium macrocarpon HOM05D006541 ORTHO05D000277 6.7e-14 82.8 46 76.1
MELO3C035773.2 Cucumis melo HOM05D006541 ORTHO05D008471 7.4e-13 79.3 46 71.7
CsaV3_1G005410 Cucumis sativus L. HOM05D006541 ORTHO05D008471 7.4e-13 79.3 46 71.7
Haze_07334 Corylus avellana HOM05D006541 ORTHO05D008471 3.7e-12 77.0 48 72.9
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.3e-09 68.6 101 48.5
SEGI_20393 Sequoiadendron giganteum HOM05D006541 ORTHO05D008471 4.9e-09 66.6 50 56.0
Cfa027053 Carpinus fangiana HOM05D006541 ORTHO05D124901 1.2e-07 62.0 224 25.9
FAN14G0637 Fragaria x ananassa HOM05D006541 ORTHO05D008471 3.5e-07 60.5 101 44.6


User provided reference genes

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