Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 6.0e-58 227.3 111 100.0
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 1.1e-46 189.9 114 80.7
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 1.8e-46 189.1 114 80.7
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.8e-46 189.1 115 81.7
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 2.6e-45 185.3 115 80.0
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 5.8e-45 184.1 114 78.9
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 2.9e-44 181.8 114 78.1
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 9.3e-43 176.8 112 77.7
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 2.7e-42 175.3 114 78.9
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 3.5e-42 174.9 112 78.6
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 3.5e-42 174.9 112 78.6
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 3.5e-42 174.9 112 78.6
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 1.0e-41 173.3 113 76.1
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 1.0e-41 173.3 113 76.1
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 1.7e-41 172.6 106 79.2
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 1.7e-41 172.6 106 79.2
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 6.6e-41 170.6 111 73.9
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 8.7e-41 170.2 113 75.2
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 8.7e-41 170.2 113 75.2
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 8.7e-41 170.2 113 75.2
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 5.6e-40 167.5 106 77.4
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 6.2e-39 164.1 106 76.4
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 4.0e-38 161.4 114 73.7
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 2.3e-25 119.0 70 77.1
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 9.0e-22 107.1 78 73.1
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 7.6e-21 104.0 110 48.2
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 1.3e-20 103.2 93 48.4
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 2.2e-20 102.4 106 48.1
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 2.5e-19 99.0 92 48.9
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 5.5e-19 97.8 96 45.8
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 9.3e-19 97.1 94 51.1
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 4.6e-18 94.7 73 54.8
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 7.9e-18 94.0 102 44.1
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 7.9e-18 94.0 89 51.7
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 1.8e-17 92.8 106 46.2
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 2.3e-17 92.4 106 46.2
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 3.0e-17 92.0 97 43.3
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 5.1e-17 91.3 73 50.7
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 6.7e-17 90.9 95 47.4
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 8.7e-17 90.5 96 50.0
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 8.7e-17 90.5 106 45.3
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.1e-16 90.1 102 44.1
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 1.9e-16 89.4 94 47.9
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 1.9e-16 89.4 101 47.5
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.9e-16 89.4 90 46.7
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 2.5e-16 89.0 111 45.9
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 3.3e-16 88.6 73 52.1
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 3.3e-16 88.6 95 47.4
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 4.3e-16 88.2 72 52.8
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 5.7e-16 87.8 102 42.2
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.3e-15 86.7 86 44.2
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.3e-15 86.7 113 43.4
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 1.3e-15 86.7 104 45.2
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 2.2e-15 85.9 86 48.8
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.2e-15 85.9 111 42.3
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 2.2e-15 85.9 111 39.6
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 2.8e-15 85.5 76 51.3
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 4.8e-15 84.7 111 44.1
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 4.8e-15 84.7 57 63.2
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.4e-14 82.4 102 43.1
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 4.1e-14 81.6 68 54.4
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 4.1e-14 81.6 101 41.6
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 4.1e-14 81.6 101 41.6
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 5.3e-14 81.3 96 42.7
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 6.9e-14 80.9 101 38.6
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 9.0e-14 80.5 101 40.6
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 1.5e-13 79.7 104 38.5
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 2.6e-13 79.0 100 42.0
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 3.8e-12 75.1 69 46.4
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 3.8e-12 75.1 102 40.2
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 5.0e-12 74.7 107 39.3
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 8.5e-12 73.9 101 36.6
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 3.2e-11 72.0 70 48.6
BolC8t49147H Brassica oleracea HOM05D007926 ORTHO05D009983 2.1e-10 69.3 37 86.5
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 3.6e-10 68.6 109 35.8
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 3.6e-10 68.6 69 44.9
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 3.9e-09 65.1 54 46.3
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 8.8e-09 63.9 66 45.5
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 1.5e-08 63.2 88 37.5
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 1.7e-07 59.7 46 47.8
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 3.7e-07 58.5 92 35.9
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 1.8e-06 56.2 64 40.6


User provided reference genes

Program Settings