Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10009627m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.0e-108 396.7 197 100.0
Thhalv10009941m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 6.4e-95 350.9 197 90.4
Thhalv10009369m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 3.0e-92 342.0 194 88.7
Thhalv10009514m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.9e-91 339.3 190 90.5
Thhalv10009333m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 2.1e-90 335.9 194 87.6
Thhalv10009650m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.3e-87 326.6 190 87.9
Thhalv10009711m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.4e-86 323.2 181 90.1
Thhalv10009683m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.3e-79 300.1 172 86.6
Thhalv10009620m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.5e-72 276.6 159 87.4
AL1G56530 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 3.0e-52 209.1 188 58.5
AL1G56540 Arabidopsis lyrata HOM05D003554 ORTHO05D005130 3.0e-52 209.1 188 58.5
Thhalv10009575m.g Eutrema salsugineum HOM05D003554 ORTHO05D005130 1.5e-48 196.8 121 84.3
Carub.0278s0001 Capsella rubella HOM05D003554 ORTHO05D005130 1.0e-28 131.0 188 37.8
Carub.0003s3367 Capsella rubella HOM05D003554 ORTHO05D005130 1.8e-28 130.2 188 37.8
Carub.0093s0002 Capsella rubella HOM05D003554 ORTHO05D005130 3.0e-28 129.4 180 39.4
Carub.0006s2609 Capsella rubella HOM05D003554 ORTHO05D005130 3.9e-28 129.0 188 37.2
Carub.0007s0014 Capsella rubella HOM05D003554 ORTHO05D005130 1.1e-27 127.5 188 37.8
Carub.0001s3566 Capsella rubella HOM05D003554 ORTHO05D005130 1.5e-27 127.1 188 37.8
BNapus_Darmor_BZH_scaffold_167p00060 Brassica napus HOM05D003554 ORTHO05D005130 6.3e-26 121.7 180 38.3
Carub.0002s0995 Capsella rubella HOM05D003554 ORTHO05D005130 6.9e-25 118.2 188 35.1
Carub.0002s0983 Capsella rubella HOM05D003554 ORTHO05D005130 1.5e-24 117.1 188 37.8
Carub.0002s0984 Capsella rubella HOM05D003554 ORTHO05D005130 2.6e-24 116.3 188 37.2
Carub.0002s1016 Capsella rubella HOM05D003554 ORTHO05D005130 5.9e-24 115.2 183 38.3
Aa31LG7G10740 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.7e-24 114.8 172 37.2
Carub.0007s3074 Capsella rubella HOM05D003554 ORTHO05D005130 1.0e-23 114.4 184 38.0
BcaB02g10640 Brassica carinata HOM05D003554 ORTHO05D005130 1.3e-23 114.0 180 38.3
BcaB07g31822 Brassica carinata HOM05D003554 ORTHO05D032345 1.7e-23 113.6 193 32.1
Carub.0004s0685 Capsella rubella HOM05D003554 ORTHO05D005130 8.5e-23 111.3 189 37.6
C05p06190 Brassica napus HOM05D003554 ORTHO05D005130 1.4e-22 110.5 168 39.3
Carub.0002s1014 Capsella rubella HOM05D003554 ORTHO05D005130 1.4e-22 110.5 184 37.0
Aa31sc111G40 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.5e-22 109.8 180 35.6
BolC5t32273H Brassica oleracea HOM05D003554 ORTHO05D005130 3.2e-22 109.4 191 37.2
C06p00220 Brassica napus HOM05D003554 ORTHO05D005130 4.2e-22 109.0 191 37.2
Sp7g02635 Schrenkiella parvula HOM05D003554 ORTHO05D005130 2.1e-21 106.7 142 43.0
Aa31LG6G9970 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.7e-21 106.3 170 35.9
BcaB08g35391 Brassica carinata HOM05D003554 ORTHO05D005130 2.7e-21 106.3 178 37.1
Aa31LG1G6440 Aethionema arabicum HOM05D003554 ORTHO05D005130 6.1e-21 105.1 180 35.0
BraA07t28446Z Brassica rapa HOM05D003554 ORTHO05D005130 1.0e-20 104.4 191 36.6
Aa31LG10G9040 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.4e-20 104.0 182 34.6
BcaB01g01146 Brassica carinata HOM05D003554 ORTHO05D005130 5.1e-20 102.1 193 37.8
BcaB04g17902 Brassica carinata HOM05D003554 ORTHO05D005130 1.1e-19 100.9 180 35.0
C08p06800 Brassica napus HOM05D003554 ORTHO05D005130 2.0e-19 100.1 146 41.1
BolC5t32025H Brassica oleracea HOM05D003554 ORTHO05D005130 2.0e-19 100.1 183 36.6
A07p06510 Brassica napus HOM05D003554 ORTHO05D005130 2.6e-19 99.8 191 36.1
BcaC08g42899 Brassica carinata HOM05D003554 ORTHO05D005130 4.4e-19 99.0 172 37.2
BcaC07g37291 Brassica carinata HOM05D008316 ORTHO05D005130 9.7e-19 97.8 169 34.9
Aa31LG11G8070 Aethionema arabicum HOM05D003554 ORTHO05D005130 1.7e-18 97.1 183 31.7
Carub.0003s2756 Capsella rubella HOM05D003554 ORTHO05D005130 3.7e-18 95.9 176 34.7
BcaB01g02862 Brassica carinata HOM05D003554 ORTHO05D005130 4.8e-18 95.5 170 34.7
Aa31sc538G20 Aethionema arabicum HOM05D003554 ORTHO05D005130 5.3e-17 92.0 157 32.5
BcaC07g37687 Brassica carinata HOM05D003554 ORTHO05D005130 9.1e-17 91.3 179 36.3
BcaB05g21986 Brassica carinata HOM05D008316 ORTHO05D005130 2.0e-16 90.1 131 38.2
BcaB06g28040 Brassica carinata HOM05D008316 ORTHO05D005130 2.0e-16 90.1 131 38.2
BcaB05g25144 Brassica carinata HOM05D008316 ORTHO05D005130 2.6e-16 89.7 110 40.0
BcaC04g20935 Brassica carinata HOM05D008316 ORTHO05D005130 2.6e-16 89.7 109 41.3
C04p52530 Brassica napus HOM05D008316 ORTHO05D005130 2.6e-16 89.7 109 40.4
BolC9t56608H Brassica oleracea HOM05D008316 ORTHO05D005130 2.6e-16 89.7 109 41.3
BcaB02g06748 Brassica carinata HOM05D008316 ORTHO05D005130 4.5e-16 89.0 108 41.7
THA.LOC104804655 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.5e-16 89.0 166 33.7
BcaB05g23532 Brassica carinata HOM05D008316 ORTHO05D005130 7.7e-16 88.2 130 37.7
BcaB08g35337 Brassica carinata HOM05D003554 ORTHO05D005130 1.0e-15 87.8 182 33.0
BolC4t23182H Brassica oleracea HOM05D003554 ORTHO05D005130 1.0e-15 87.8 123 40.7
AT2G06420 Arabidopsis thaliana HOM05D003554 ORTHO05D005130 1.3e-15 87.4 179 33.5
THA.LOC104808464 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.3e-15 87.4 161 33.5
THA.LOC104807874 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.2e-15 86.7 169 32.5
THA.LOC109117170 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.9e-15 86.3 154 35.7
Aa31sc442G10 Aethionema arabicum HOM05D003554 ORTHO05D005130 3.8e-15 85.9 102 41.2
CARHR034150 Cardamine hirsuta HOM05D003554 ORTHO05D005130 3.8e-15 85.9 121 43.8
BcaC02g09635 Brassica carinata HOM05D008316 ORTHO05D005130 6.5e-15 85.1 109 41.3
BcaC08g44739 Brassica carinata HOM05D008316 ORTHO05D005130 6.5e-15 85.1 115 39.1
BcaC06g34855 Brassica carinata HOM05D008316 ORTHO05D005130 8.5e-15 84.7 109 39.4
C07p22550 Brassica napus HOM05D008316 ORTHO05D005130 8.5e-15 84.7 109 39.4
THA.LOC104816074 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.5e-15 84.7 152 30.9
THA.LOC104820187 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.5e-15 84.7 152 30.9
BcaB03g16118 Brassica carinata HOM05D003554 ORTHO05D005130 1.5e-14 84.0 178 31.5
THA.LOC104811336 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.9e-14 83.6 169 32.0
THA.LOC104810569 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.2e-14 82.8 152 30.9
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 4.2e-14 82.4 114 36.8
THA.LOC104803192 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.2e-14 82.4 169 32.0
THA.LOC104807807 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.2e-14 82.4 169 32.0
C08p07230 Brassica napus HOM05D008316 ORTHO05D005130 5.5e-14 82.0 109 37.6
THA.LOC104811332 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.5e-14 82.0 155 34.8
THA.LOC104813280 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.2e-13 80.9 152 30.3
THA.LOC104809667 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.7e-13 79.7 155 34.8
THA.LOC104822529 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.7e-13 79.0 156 32.7
THA.LOC104810611 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.1e-13 78.6 154 33.8
THA.LOC104823081 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.1e-13 78.6 155 34.2
THA.LOC104825259 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 6.1e-13 78.6 152 31.6
BcaB07g32291 Brassica carinata HOM05D008316 ORTHO05D014956 8.0e-13 78.2 98 39.8
THA.LOC104810514 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.0e-13 78.2 156 31.4
THA.LOC109116427 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.0e-13 78.2 156 32.7
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.0e-13 78.2 170 31.2
CARHR213120 Cardamine hirsuta HOM05D003554 ORTHO05D005130 1.0e-12 77.8 73 53.4
THA.LOC104798651 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 1.0e-12 77.8 155 34.2
THA.LOC109116390 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.0e-12 77.8 128 34.4
Aa31LG6G10050 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.3e-12 76.6 116 38.8
CARHR049310 Cardamine hirsuta HOM05D003554 ORTHO05D005130 3.0e-12 76.3 123 39.0
THA.LOC104803467 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.0e-12 76.3 152 33.6
THA.LOC109116278 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.0e-12 76.3 152 32.9
THA.LOC104804766 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.9e-12 75.9 156 32.1
BolC3t19531H Brassica oleracea HOM05D003554 ORTHO05D005130 5.2e-12 75.5 116 40.5
THA.LOC104798650 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 8.8e-12 74.7 155 32.9
THA.LOC104825824 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.7e-10 70.5 152 30.9
Aa31LG5G24000 Aethionema arabicum HOM05D003554 ORTHO05D005130 2.8e-10 69.7 108 38.0
BcaB06g26180 Brassica carinata HOM05D009532 ORTHO05D005130 4.8e-10 68.9 117 34.2
C03p67190 Brassica napus HOM05D003554 ORTHO05D005130 3.1e-09 66.2 138 34.8
CARHR113350 Cardamine hirsuta HOM05D003554 ORTHO05D005130 3.1e-09 66.2 90 43.3
Aa31LG6G9990 Aethionema arabicum HOM05D003554 ORTHO05D005130 4.1e-09 65.9 169 27.2
BcaC05g27442 Brassica carinata HOM05D003554 ORTHO05D005130 4.1e-09 65.9 103 35.9
THA.LOC104821602 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.1e-09 65.9 131 35.1
C02p31360 Brassica napus HOM05D009532 ORTHO05D005130 5.3e-09 65.5 115 32.2
THA.LOC104825207 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.3e-09 65.5 91 36.3
THA.LOC104799670 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.5e-08 62.4 124 33.1
THA.LOC104815123 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 7.7e-08 61.6 114 34.2
THA.LOC104821166 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.3e-07 60.8 110 31.8
THA.LOC104803478 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 1.7e-07 60.5 127 32.3
BcaC09g49342 Brassica carinata HOM05D008316 ORTHO05D005130 2.2e-07 60.1 110 31.8
THA.LOC104798704 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.2e-07 60.1 108 32.4
THA.LOC104807864 Tarenaya hassleriana HOM05D003554 ORTHO05D015748 2.2e-07 60.1 110 31.8
AT1G31150 Arabidopsis thaliana HOM05D000675 ORTHO05D000395 2.9e-07 59.7 169 27.2
THA.LOC104801858 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 2.9e-07 59.7 87 37.9
CARHR034790 Cardamine hirsuta HOM05D001038 ORTHO05D000395 3.8e-07 59.3 139 31.7
THA.LOC104809856 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.0e-07 58.9 77 41.6
CAN.G263.3 Capsicum annuum HOM05D000679 ORTHO05D000482 8.5e-07 58.2 116 29.3
Thhalv10022419m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 8.5e-07 58.2 140 27.9
THA.LOC104827521 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 3.2e-06 56.2 92 37.0
THA.LOC104801959 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 4.2e-06 55.8 109 34.9
Carub.0002s1170 Capsella rubella HOM05D000675 ORTHO05D000395 5.5e-06 55.5 104 28.8
THA.LOC104821507 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.5e-06 55.5 63 46.0
THA.LOC104822875 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.5e-06 55.5 89 36.0
Aa31sc471G30 Aethionema arabicum HOM05D003554 ORTHO05D005130 7.2e-06 55.1 101 34.7
Thhalv10005454m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 7.2e-06 55.1 149 26.8
Carub.0001s3338 Capsella rubella HOM05D000675 ORTHO05D000395 9.4e-06 54.7 128 28.9


User provided reference genes

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