Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 7.9e-91 337.0 164 100.0
Sp1g11250 Schrenkiella parvula HOM05D007482 ORTHO05D003038 1.8e-39 166.4 100 79.0
BraA06t26175Z Brassica rapa HOM05D007482 ORTHO05D003038 1.0e-37 160.6 159 55.3
BolC3t18270H Brassica oleracea HOM05D007482 ORTHO05D003038 2.1e-35 152.9 145 57.2
Thhalv10009322m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 9.8e-33 144.1 110 69.1
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 3.7e-32 142.1 100 68.0
A09p63730 Brassica napus HOM05D007482 ORTHO05D003038 1.4e-31 140.2 111 64.0
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 3.2e-31 139.0 100 68.0
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 3.2e-31 139.0 100 68.0
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 7.0e-31 137.9 100 67.0
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 1.0e-29 134.0 100 66.0
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 1.0e-29 134.0 100 66.0
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 1.0e-29 134.0 100 66.0
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 1.3e-29 133.7 100 66.0
BolC8t52262H Brassica oleracea HOM05D007482 ORTHO05D003038 2.3e-29 132.9 100 65.0
BolC8t52263H Brassica oleracea HOM05D007482 ORTHO05D003038 3.0e-29 132.5 100 65.0
C08p47230 Brassica napus HOM05D007482 ORTHO05D003038 3.9e-29 132.1 111 59.5
Carub.0001s1235 Capsella rubella HOM05D007482 ORTHO05D003038 6.6e-29 131.3 101 67.3
A09p63720 Brassica napus HOM05D007482 ORTHO05D003038 8.6e-29 131.0 100 63.0
BraA09t41720Z Brassica rapa HOM05D007482 ORTHO05D003038 8.6e-29 131.0 100 63.0
AT1G12660 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 2.3e-26 122.9 102 62.7
AL1G24120 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 1.9e-23 113.2 96 60.4
BcaC05g25122 Brassica carinata HOM05D007482 ORTHO05D003038 5.4e-23 111.7 100 61.0
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 4.6e-22 108.6 99 58.6
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 4.6e-22 108.6 99 58.6
BcaC05g25168 Brassica carinata HOM05D007482 ORTHO05D003038 3.9e-21 105.5 102 57.8
CARHR012970 Cardamine hirsuta HOM05D007482 ORTHO05D003038 3.9e-21 105.5 102 53.9
C05p10620 Brassica napus HOM05D007482 ORTHO05D003038 1.9e-20 103.2 99 58.6
BolC5t29804H Brassica oleracea HOM05D007482 ORTHO05D003038 1.9e-20 103.2 99 58.6
AL1G24160 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 4.9e-16 88.6 113 42.5
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 9.2e-15 84.3 107 44.9
Thhalv10019701m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 3.5e-14 82.4 101 43.6
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 3.5e-14 82.4 115 40.0
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 7.8e-14 81.3 99 41.4
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 7.8e-14 81.3 113 38.9
Thhalv10017433m.g Eutrema salsugineum HOM05D007482 ORTHO05D016827 7.8e-14 81.3 102 44.1
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.0e-13 80.9 99 40.4
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 1.7e-13 80.1 108 40.7
A05p29160 Brassica napus HOM05D007482 ORTHO05D003038 2.3e-13 79.7 110 40.0
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.3e-13 79.7 98 41.8
C05p44570 Brassica napus HOM05D007482 ORTHO05D003038 3.0e-13 79.3 116 37.9
BolC5t33184H Brassica oleracea HOM05D007482 ORTHO05D003038 3.0e-13 79.3 116 37.9
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 3.9e-13 79.0 116 42.2
BraA05t21798Z Brassica rapa HOM05D007482 ORTHO05D003038 3.9e-13 79.0 116 39.7
A05p29150 Brassica napus HOM05D007482 ORTHO05D003038 5.1e-13 78.6 116 39.7
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 5.1e-13 78.6 117 35.9
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 1.1e-12 77.4 117 35.9
BolC8t52259H Brassica oleracea HOM05D007482 ORTHO05D003038 1.5e-12 77.0 111 36.9
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 1.9e-12 76.6 119 41.2
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 2.5e-12 76.3 100 38.0
BraA09t41719Z Brassica rapa HOM05D007482 ORTHO05D003038 3.3e-12 75.9 118 41.5
Thhalv10009942m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 3.3e-12 75.9 101 46.5
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 3.3e-12 75.9 100 40.0
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 4.3e-12 75.5 116 37.9
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 7.3e-12 74.7 117 34.2
A09p63710 Brassica napus HOM05D007482 ORTHO05D003038 9.6e-12 74.3 122 40.2
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 9.6e-12 74.3 117 34.2
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 1.2e-11 73.9 116 36.2
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 2.1e-11 73.2 96 40.6
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 3.6e-11 72.4 98 37.8
BraA05t21800Z Brassica rapa HOM05D007482 ORTHO05D003038 3.6e-11 72.4 110 38.2
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 4.7e-11 72.0 101 37.6
Carub.0002s1663 Capsella rubella HOM05D007482 ORTHO05D003038 8.1e-11 71.2 93 43.0
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-10 70.1 114 33.3
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-10 70.1 116 34.5
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 1.8e-10 70.1 116 34.5
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 5.2e-10 68.6 113 37.2
BcaB07g32750 Brassica carinata HOM05D007482 ORTHO05D003038 6.9e-10 68.2 97 39.2
Carub.0001s1238 Capsella rubella HOM05D007482 ORTHO05D003038 1.2e-09 67.4 112 34.8
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 2.6e-09 66.2 114 32.5
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.6e-09 66.2 111 40.5
A09p35320 Brassica napus HOM05D007482 ORTHO05D003038 3.4e-09 65.9 108 38.9
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 3.4e-09 65.9 95 34.7
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 3.4e-09 65.9 96 42.7
AT1G12672 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 7.6e-09 64.7 105 38.1
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 7.6e-09 64.7 104 35.6
C08p47180 Brassica napus HOM05D007482 ORTHO05D003038 9.9e-09 64.3 96 41.7
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 1.3e-08 63.9 98 38.8
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.7e-08 63.5 73 37.0
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 1.7e-08 63.5 102 38.2
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 2.2e-08 63.2 78 39.7
Thhalv10019821m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 2.9e-08 62.8 95 44.2
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 2.9e-08 62.8 107 34.6
BraA09t39062Z Brassica rapa HOM05D007482 ORTHO05D003038 3.8e-08 62.4 96 38.5
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 4.9e-08 62.0 97 37.1
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 4.9e-08 62.0 112 33.9
C05p30070 Brassica napus HOM05D007482 ORTHO05D003038 6.4e-08 61.6 106 37.7
BolC5t31743H Brassica oleracea HOM05D007482 ORTHO05D003038 6.4e-08 61.6 106 37.7
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 6.4e-08 61.6 103 38.8
Carub.0001s1236 Capsella rubella HOM05D007482 ORTHO05D003038 8.4e-08 61.2 101 35.6
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 8.4e-08 61.2 89 42.7
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 8.4e-08 61.2 89 42.7
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 8.4e-08 61.2 89 42.7
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 1.9e-07 60.1 104 31.7
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 1.9e-07 60.1 95 37.9
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 3.2e-07 59.3 95 38.9
Carub.0001s1239 Capsella rubella HOM05D007482 ORTHO05D003038 4.2e-07 58.9 117 33.3
PSO648G0129 Papaver somniferum HOM05D007482 ORTHO05D003038 4.2e-07 58.9 105 30.5
Carub.0004s0495 Capsella rubella HOM05D007482 ORTHO05D003038 9.3e-07 57.8 123 34.1
Gohir.A09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 9.3e-07 57.8 103 38.8
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 1.2e-06 57.4 95 34.7
Gorai.006G099100 Gossypium raimondii HOM05D005672 ORTHO05D003038 2.1e-06 56.6 103 37.9
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 2.7e-06 56.2 86 39.5
Gohir.D09G083500 Gossypium hirsutum HOM05D005672 ORTHO05D003038 2.7e-06 56.2 103 37.9
C06p24320 Brassica napus HOM05D017967 ORTHO05D003038 3.5e-06 55.8 94 36.2
AL1G24150 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 4.6e-06 55.5 66 48.5
C06p24420 Brassica napus HOM05D017967 ORTHO05D003038 6.0e-06 55.1 96 36.5
BolC6t37589H Brassica oleracea HOM05D017967 ORTHO05D003038 6.0e-06 55.1 96 36.5
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 6.0e-06 55.1 86 38.4


User provided reference genes

Program Settings