Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.1e-203 712.2 374 100.0
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.1e-167 593.6 372 83.1
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 4.7e-163 578.2 372 81.2
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 5.9e-158 561.2 363 80.4
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 3.8e-157 558.5 363 80.4
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 1.9e-156 556.2 363 80.2
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 2.7e-155 552.4 371 76.0
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 1.0e-154 550.4 372 76.1
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 6.3e-152 541.2 373 76.7
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 8.8e-146 520.8 374 73.0
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 2.3e-122 443.0 380 62.9
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 1.9e-116 423.3 362 63.0
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 7.3e-92 341.7 371 50.4
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 6.9e-90 335.1 372 50.0
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 6.9e-90 335.1 381 49.1
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 2.9e-88 329.7 382 47.9
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 1.4e-87 327.4 381 48.6
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.4e-87 326.6 383 48.6
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 7.1e-87 325.1 377 49.1
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 9.3e-87 324.7 371 48.8
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 1.2e-86 324.3 381 48.3
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 3.5e-86 322.8 390 50.0
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 3.5e-86 322.8 381 47.8
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 6.0e-86 322.0 382 46.3
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 1.0e-85 321.2 372 50.3
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 3.9e-85 319.3 369 46.3
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 1.1e-84 317.8 381 47.5
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 1.9e-84 317.0 382 46.9
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 4.3e-84 315.8 373 48.0
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 5.6e-84 315.5 348 50.6
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 7.3e-84 315.1 371 46.6
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.6e-83 313.9 381 46.7
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 1.4e-82 310.8 371 49.1
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 5.3e-82 308.9 379 46.2
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 1.2e-81 307.8 371 47.2
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 1.5e-81 307.4 381 46.2
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 2.6e-81 306.6 371 47.2
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 5.8e-81 305.4 366 46.2
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 9.9e-81 304.7 383 47.5
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.7e-80 303.9 370 47.3
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.9e-80 303.1 344 50.6
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 3.8e-80 302.8 380 45.5
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 1.4e-79 300.8 382 45.5
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 1.9e-79 300.4 384 47.7
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.9e-79 300.4 367 46.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.4e-79 300.1 358 47.2
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 3.2e-79 299.7 378 44.7
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 3.5e-78 296.2 384 45.8
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 1.0e-77 294.7 368 45.7
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 1.8e-77 293.9 371 45.8
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 3.0e-77 293.1 384 47.1
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 6.7e-77 292.0 367 43.1
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.1e-76 291.2 371 43.7
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 1.5e-76 290.8 372 43.8
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 1.5e-76 290.8 375 43.5
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 9.6e-76 288.1 381 43.8
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 9.6e-76 288.1 371 43.9
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.0e-74 282.7 375 43.5
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 3.4e-73 279.6 373 43.4
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 4.5e-73 279.3 373 46.6
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 7.6e-73 278.5 370 44.1
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.3e-72 277.7 377 42.4
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 3.8e-72 276.2 341 46.6
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 3.8e-72 276.2 318 49.1
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 6.4e-72 275.4 377 42.2
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 4.2e-71 272.7 366 44.3
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 5.5e-71 272.3 381 43.0
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 1.6e-70 270.8 361 44.3
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 7.9e-70 268.5 339 46.6
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 1.8e-69 267.3 368 42.4
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 5.1e-69 265.8 381 40.7
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 1.1e-68 264.6 371 42.3
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 2.5e-68 263.5 385 41.3
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 1.1e-66 258.1 365 43.8
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 2.4e-66 256.9 313 45.0
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 5.3e-66 255.8 373 40.8
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 6.9e-66 255.4 262 51.1
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 2.9e-64 250.0 372 39.0
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 3.8e-64 249.6 368 39.4
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 6.5e-64 248.8 368 41.6
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 1.1e-63 248.1 371 38.3
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 3.5e-62 243.0 254 50.8
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 1.3e-61 241.1 374 44.1
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 6.7e-61 238.8 362 40.6
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 4.3e-60 236.1 254 49.2
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 3.7e-59 233.0 374 37.7
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 3.7e-59 233.0 366 40.2
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 9.0e-58 228.4 394 36.0
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 2.1e-54 217.2 362 42.5
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 5.1e-53 212.6 476 33.0
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 1.1e-52 211.5 367 38.4
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 4.3e-52 209.5 334 43.1
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.2e-48 197.2 237 46.8
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 4.2e-47 193.0 252 44.4
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 9.4e-47 191.8 308 43.2
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 1.2e-46 191.4 258 39.9
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 4.4e-36 156.4 362 31.5
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 2.0e-28 131.0 240 33.3
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 4.4e-28 129.8 143 49.0
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 1.4e-21 108.2 117 49.6
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 4.0e-21 106.7 170 38.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 9.8e-20 102.1 215 32.6
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 2.8e-19 100.5 115 46.1
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 7.7e-17 92.4 132 42.4
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 4.2e-15 86.7 421 24.5
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.2e-14 85.1 154 37.0
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 4.7e-14 83.2 148 37.2
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 1.8e-13 81.3 116 39.7
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 2.2e-11 74.3 99 45.5


User provided reference genes

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