Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 6.7e-75 283.9 138 100.0
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 7.4e-74 280.4 138 97.8
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 2.4e-72 275.4 138 95.7
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 3.1e-72 275.0 138 95.7
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 3.1e-72 275.0 138 97.1
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 4.1e-72 274.6 138 96.4
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 1.2e-71 273.1 138 96.4
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 1.2e-71 273.1 138 96.4
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 1.2e-71 273.1 138 96.4
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 1.2e-71 273.1 138 96.4
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 1.2e-71 273.1 138 96.4
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 1.5e-71 272.7 138 94.9
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 4.2e-69 264.6 139 95.0
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 2.7e-68 261.9 139 91.4
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 3.6e-68 261.5 139 92.1
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 3.6e-68 261.5 138 91.3
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 4.6e-68 261.2 138 92.0
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 1.0e-67 260.0 138 89.9
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 3.9e-67 258.1 137 92.7
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 2.2e-62 242.3 136 86.0
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 6.5e-62 240.7 136 86.0
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 1.1e-61 240.0 134 84.3
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 3.6e-60 235.0 136 82.4
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 6.7e-59 230.7 134 80.6
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 8.8e-59 230.3 135 82.2
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 2.0e-58 229.2 137 78.1
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 2.6e-58 228.8 136 81.6
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 9.7e-58 226.9 131 80.2
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 1.3e-57 226.5 137 80.3
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.3e-57 226.5 137 79.6
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.7e-57 226.1 137 77.4
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 1.7e-57 226.1 137 77.4
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.7e-57 226.1 136 80.9
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 1.7e-57 226.1 136 80.9
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 1.7e-57 226.1 136 79.4
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 2.2e-57 225.7 136 80.9
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 2.8e-57 225.3 137 79.6
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 2.8e-57 225.3 135 80.7
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 3.7e-57 224.9 136 80.1
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 4.8e-57 224.6 136 80.9
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 8.2e-57 223.8 137 79.6
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 8.2e-57 223.8 136 79.4
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 1.1e-56 223.4 136 79.4
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.8e-56 222.6 136 76.5
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 2.4e-56 222.2 136 80.1
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 2.4e-56 222.2 136 78.7
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 3.1e-56 221.9 138 79.0
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 3.1e-56 221.9 137 78.1
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 3.1e-56 221.9 137 78.8
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 5.3e-56 221.1 138 78.3
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 9.1e-56 220.3 136 77.9
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 1.2e-55 219.9 137 78.1
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.2e-55 219.9 136 75.7
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 1.2e-55 219.9 135 79.3
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 1.2e-55 219.9 136 77.9
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 1.5e-55 219.5 136 76.5
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 2.0e-55 219.2 134 76.9
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 2.0e-55 219.2 137 77.4
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 2.6e-55 218.8 131 77.1
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 3.5e-55 218.4 136 77.2
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 4.5e-55 218.0 137 77.4
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 4.5e-55 218.0 136 74.3
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 4.5e-55 218.0 137 77.4
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 5.9e-55 217.6 136 77.2
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 7.7e-55 217.2 127 79.5
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 1.0e-54 216.9 136 75.7
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 1.0e-54 216.9 137 76.6
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 1.3e-54 216.5 132 78.0
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 1.7e-54 216.1 137 74.5
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 1.7e-54 216.1 137 76.6
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 2.2e-54 215.7 136 74.3
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 5.0e-54 214.5 137 75.2
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 6.5e-54 214.2 138 73.2
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 6.5e-54 214.2 137 75.9
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 8.5e-54 213.8 136 75.0
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 8.5e-54 213.8 136 76.5
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 8.5e-54 213.8 136 75.0
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 1.1e-53 213.4 136 75.0
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 1.5e-53 213.0 138 74.6
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 1.9e-53 212.6 132 75.8
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 2.5e-53 212.2 131 77.1
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.2e-53 211.8 138 73.9
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 5.5e-53 211.1 136 75.0
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 7.2e-53 210.7 136 75.0
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 2.1e-52 209.1 136 72.8
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 2.1e-52 209.1 136 74.3
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 8.0e-52 207.2 137 73.7
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 1.4e-51 206.5 130 74.6
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 3.0e-51 205.3 134 72.4
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 6.7e-51 204.1 136 72.1
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 8.8e-51 203.8 129 77.5
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 3.1e-48 195.3 137 73.7
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 5.9e-47 191.0 131 71.0
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 3.8e-46 188.3 130 70.8
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 6.1e-44 181.0 138 63.0
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 7.5e-42 174.1 116 73.3
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.8e-41 171.4 152 59.9
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 8.3e-41 170.6 128 64.1
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 1.7e-38 162.9 93 80.6
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 8.5e-38 160.6 129 55.8
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 2.5e-37 159.1 132 63.6
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 4.2e-37 158.3 95 76.8
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 4.2e-37 158.3 101 73.3
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 7.2e-37 157.5 158 56.3
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 1.8e-35 152.9 136 62.5
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 8.8e-35 150.6 94 73.4
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 3.7e-33 145.2 101 68.3
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 5.4e-32 141.4 97 68.0
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 7.0e-32 141.0 134 55.2
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 2.0e-31 139.4 97 69.1
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.6e-30 134.4 136 57.4
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 5.5e-29 131.3 136 53.7
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 6.6e-22 107.8 131 46.6
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 1.9e-21 106.3 136 46.3
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 1.9e-21 106.3 90 60.0
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 7.3e-21 104.4 95 52.6
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 8.9e-19 97.4 123 41.5
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 1.7e-17 93.2 54 77.8
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 6.4e-17 91.3 126 39.7
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 1.1e-16 90.5 60 68.3
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 1.4e-16 90.1 136 42.6
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 2.4e-16 89.4 54 72.2
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 1.2e-15 87.0 49 81.6
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 1.1e-13 80.5 40 92.5
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 4.4e-10 68.6 41 78.0
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 4.9e-09 65.1 37 78.4
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 1.7e-06 56.6 30 83.3


User provided reference genes

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