Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 5.9e-92 340.9 178 100.0
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 1.1e-82 310.1 179 91.1
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 5.2e-80 301.2 178 89.9
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 1.2e-79 300.1 178 88.2
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 1.3e-78 296.6 178 87.1
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.4e-77 293.1 184 87.5
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 1.4e-77 293.1 180 89.4
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 3.2e-77 292.0 178 86.0
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 7.1e-77 290.8 180 88.9
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 2.7e-76 288.9 180 87.8
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 3.9e-75 285.0 180 87.8
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 3.9e-75 285.0 180 87.8
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 9.5e-74 280.4 164 89.0
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 4.4e-63 245.0 176 76.1
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.3e-59 233.4 167 76.0
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 1.1e-37 160.6 124 65.3
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 5.5e-37 158.3 145 57.9
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 7.9e-36 154.5 138 58.0
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 3.0e-35 152.5 132 59.8
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 5.1e-35 151.8 146 56.8
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 8.7e-35 151.0 132 59.8
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.5e-34 150.2 129 62.8
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 7.4e-34 147.9 124 62.1
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.3e-33 147.1 159 50.9
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 1.6e-33 146.7 115 63.5
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 1.6e-33 146.7 128 60.9
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 3.7e-33 145.6 161 49.1
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 1.4e-32 143.7 139 52.5
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 4.1e-32 142.1 114 62.3
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 4.1e-32 142.1 112 61.6
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 5.3e-32 141.7 125 61.6
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 9.0e-32 141.0 110 63.6
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.2e-31 140.6 114 57.9
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 7.6e-31 137.9 117 56.4
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 1.0e-30 137.5 137 51.8
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.0e-30 137.5 137 51.8
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.8e-30 135.6 137 51.1
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 8.5e-30 134.4 133 53.4
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 8.5e-30 134.4 113 59.3
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 1.1e-29 134.0 111 61.3
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 3.2e-29 132.5 115 56.5
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 3.2e-29 132.5 114 56.1
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 4.2e-29 132.1 115 57.4
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 4.2e-29 132.1 166 46.4
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.6e-28 130.2 113 59.3
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 2.1e-28 129.8 130 51.5
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 1.3e-27 127.1 125 54.4
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 2.3e-27 126.3 94 67.0
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-26 122.5 104 61.5
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-26 122.5 104 61.5
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-26 122.5 104 61.5
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 3.3e-26 122.5 104 61.5
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 5.7e-26 121.7 104 60.6
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.4e-26 121.3 104 61.5
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 1.7e-25 120.2 143 46.9
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 8.2e-25 117.9 90 64.4
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 8.2e-25 117.9 118 53.4
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.8e-24 116.7 104 58.7
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 5.9e-23 111.7 90 63.3
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 5.9e-23 111.7 221 34.8
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 1.7e-22 110.2 84 66.7
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 2.2e-22 109.8 113 48.7
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 2.2e-22 109.8 113 48.7
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-20 103.2 104 56.7
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-20 103.2 104 56.7
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 1.1e-18 97.4 156 39.1
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 4.5e-15 85.5 80 58.8
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 1.9e-13 80.1 65 56.9
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 3.6e-12 75.9 59 61.0
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 6.7e-11 71.6 122 41.0
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 4.4e-10 68.9 68 57.4
Manes.16G088201 Manihot esculenta HOM05D005425 ORTHO05D006686 2.2e-06 56.6 96 38.5


User provided reference genes

Program Settings