Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 3.7e-103 378.3 195 100.0
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 2.1e-90 335.9 210 85.7
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 6.5e-84 314.3 200 87.0
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 7.2e-83 310.8 200 86.0
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.2e-82 310.1 200 85.5
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 2.1e-82 309.3 199 87.4
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 1.8e-81 306.2 199 86.9
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 2.3e-81 305.8 201 81.6
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 2.3e-81 305.8 201 81.6
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 1.2e-77 293.5 197 82.2
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 5.9e-77 291.2 205 80.5
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 1.4e-73 280.0 206 73.8
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 5.6e-59 231.5 216 63.9
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 5.2e-57 224.9 206 60.7
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 7.5e-56 221.1 210 60.5
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.9e-54 216.5 213 56.8
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 2.4e-54 216.1 166 71.1
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 7.0e-54 214.5 166 69.9
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.6e-53 213.4 213 56.3
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 2.0e-53 213.0 166 69.3
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.0e-52 210.7 199 60.8
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.7e-52 209.9 165 66.7
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 2.3e-52 209.5 199 60.3
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 3.9e-52 208.8 173 67.1
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 8.6e-52 207.6 199 60.3
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.9e-51 206.5 166 68.1
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 9.5e-51 204.1 173 66.5
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 1.2e-50 203.8 175 62.3
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 1.6e-50 203.4 165 66.7
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 1.6e-50 203.4 133 75.2
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 2.1e-50 203.0 169 66.3
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 2.8e-50 202.6 152 68.4
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 6.2e-50 201.4 198 57.6
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 8.1e-50 201.1 181 61.9
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 8.1e-50 201.1 173 64.7
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.4e-49 200.3 170 63.5
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 1.4e-49 200.3 206 58.3
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 1.4e-49 200.3 170 64.7
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 1.8e-49 199.9 169 64.5
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 3.1e-49 199.1 182 61.0
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 3.1e-49 199.1 167 65.9
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 6.8e-49 198.0 131 74.8
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 6.8e-49 198.0 164 65.9
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 8.9e-49 197.6 194 60.3
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 8.9e-49 197.6 163 68.1
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 8.9e-49 197.6 158 65.8
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 1.2e-48 197.2 152 66.4
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 2.0e-48 196.4 181 63.5
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 2.0e-48 196.4 182 61.5
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 2.6e-48 196.1 195 59.5
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 5.8e-48 194.9 195 59.5
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 5.8e-48 194.9 174 60.3
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 5.8e-48 194.9 182 60.4
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 7.5e-48 194.5 195 59.0
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 9.9e-48 194.1 165 64.2
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.3e-47 193.7 151 66.9
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 1.3e-47 193.7 182 59.9
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.7e-47 193.4 130 74.6
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 1.7e-47 193.4 182 59.9
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 2.9e-47 192.6 131 72.5
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 3.7e-47 192.2 133 72.9
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 3.7e-47 192.2 205 56.6
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 4.9e-47 191.8 176 61.9
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 4.9e-47 191.8 165 65.5
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 6.4e-47 191.4 163 66.9
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 6.4e-47 191.4 128 75.0
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 6.4e-47 191.4 147 68.7
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 8.3e-47 191.0 165 63.0
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 1.1e-46 190.7 181 61.3
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 1.1e-46 190.7 156 66.0
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 1.4e-46 190.3 144 68.8
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 1.4e-46 190.3 156 66.7
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.4e-46 190.3 156 66.7
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 2.4e-46 189.5 190 55.8
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 3.2e-46 189.1 210 54.8
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 4.1e-46 188.7 207 57.5
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 5.4e-46 188.3 161 62.1
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 5.4e-46 188.3 156 66.0
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 5.4e-46 188.3 190 56.3
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 7.1e-46 188.0 168 63.1
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 7.1e-46 188.0 144 68.1
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 7.1e-46 188.0 138 69.6
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 9.2e-46 187.6 158 67.1
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 9.2e-46 187.6 159 64.2
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 1.6e-45 186.8 212 53.8
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 4.6e-45 185.3 133 69.9
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 4.6e-45 185.3 158 62.7
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 1.0e-44 184.1 196 55.1
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 1.0e-44 184.1 134 68.7
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.3e-44 183.7 155 64.5
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 1.7e-44 183.3 182 58.2
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 1.1e-43 180.6 160 65.6
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 1.9e-43 179.9 178 58.4
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 2.5e-43 179.5 217 51.6
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 4.3e-43 178.7 138 65.9
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 8.9e-41 171.0 128 71.9
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 5.8e-40 168.3 135 65.9
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 5.4e-38 161.8 122 67.2
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.6e-34 150.2 101 75.2
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 2.1e-34 149.8 177 51.4
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 2.8e-34 149.4 136 54.4
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 1.3e-31 140.6 162 48.1
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 1.3e-28 130.6 132 49.2
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 6.6e-28 128.3 90 73.3
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 6.2e-26 121.7 134 45.5
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 9.0e-25 117.9 84 67.9
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 1.6e-21 107.1 70 75.7
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 3.7e-18 95.9 94 59.6
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 1.8e-17 93.6 131 42.0
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 2.5e-06 56.6 155 25.2
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 3.2e-06 56.2 98 29.6
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 7.1e-06 55.1 109 31.2
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 7.1e-06 55.1 186 24.2


User provided reference genes

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