Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 1.6e-274 948.7 457 100.0
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 2.6e-232 808.5 462 86.6
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.5e-216 756.1 452 83.0
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.7e-215 752.7 461 81.3
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 1.3e-212 743.0 457 81.8
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 1.3e-212 743.0 457 81.8
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 1.3e-212 743.0 457 81.8
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 9.6e-211 736.9 461 81.1
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 5.2e-209 731.1 465 79.8
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.6e-205 719.5 462 79.4
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 3.5e-189 665.2 459 72.3
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 3.2e-182 642.1 445 76.0
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 9.0e-177 624.0 455 69.2
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 2.6e-152 542.7 430 64.2
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 8.5e-151 537.7 437 61.6
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.2e-144 517.3 449 59.5
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 3.5e-144 515.8 446 58.1
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 4.5e-144 515.4 454 57.0
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 6.5e-143 511.5 447 58.4
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 6.5e-143 511.5 440 60.2
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 1.1e-142 510.8 433 59.4
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 3.2e-142 509.2 461 57.0
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 4.2e-142 508.8 438 59.1
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 2.1e-141 506.5 420 60.2
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 6.1e-141 505.0 436 58.5
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 8.0e-141 504.6 469 54.8
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 8.0e-141 504.6 441 58.0
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 3.0e-140 502.7 451 58.1
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 7.5e-139 498.0 445 57.3
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 1.7e-138 496.9 451 57.0
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 2.2e-138 496.5 488 53.7
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.8e-138 496.1 434 58.3
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.7e-138 495.7 436 58.0
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 3.7e-138 495.7 421 58.9
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.8e-137 493.4 409 61.1
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.4e-137 493.0 432 59.0
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 3.1e-137 492.7 386 60.1
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 7.0e-137 491.5 386 60.9
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 1.2e-136 490.7 381 60.9
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 1.6e-136 490.3 434 57.8
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 2.0e-136 490.0 466 54.3
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 2.0e-136 490.0 404 61.4
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 2.0e-136 490.0 387 60.2
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 3.5e-136 489.2 450 57.3
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 1.7e-135 486.9 379 60.2
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 2.9e-135 486.1 428 58.2
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 6.5e-135 485.0 440 56.4
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 1.5e-134 483.8 379 61.7
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 4.2e-134 482.3 407 59.5
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 7.2e-134 481.5 381 59.3
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 7.2e-134 481.5 381 59.3
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 2.1e-133 479.9 381 59.3
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 2.8e-133 479.6 412 57.3
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 8.0e-133 478.0 440 57.3
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 1.4e-132 477.2 411 57.2
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 4.0e-132 475.7 439 55.6
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 5.2e-132 475.3 381 60.9
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 3.4e-131 472.6 413 59.1
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 7.5e-131 471.5 438 54.6
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 3.1e-129 466.1 475 50.9
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 3.5e-128 462.6 405 56.8
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.7e-127 460.3 370 59.5
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 5.0e-127 458.8 378 57.7
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 8.6e-127 458.0 408 57.4
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 1.1e-126 457.6 441 54.2
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 1.5e-126 457.2 474 51.7
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 3.3e-126 456.1 409 56.5
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 4.3e-126 455.7 452 52.4
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 5.6e-126 455.3 437 54.7
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 1.6e-125 453.8 416 56.2
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.6e-125 453.8 385 57.4
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 4.7e-125 452.2 438 54.6
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 6.1e-125 451.8 467 51.2
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 3.0e-124 449.5 456 52.0
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 1.3e-122 444.1 424 55.4
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 8.3e-122 441.4 454 50.7
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 4.1e-121 439.1 425 53.6
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 9.2e-121 438.0 424 54.7
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 9.2e-121 438.0 422 54.7
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 4.6e-120 435.6 430 54.4
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 7.8e-120 434.9 424 54.2
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 3.9e-119 432.6 416 56.5
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.6e-117 427.2 424 52.4
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 2.1e-117 426.8 411 55.2
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.4e-116 424.1 448 51.1
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 1.8e-116 423.7 395 54.4
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 4.0e-116 422.5 429 52.9
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.0e-116 422.5 448 51.6
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 6.8e-116 421.8 449 52.1
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 1.2e-115 421.0 386 54.7
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.5e-115 420.6 429 52.7
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.4e-115 419.5 402 52.7
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 9.8e-115 417.9 449 51.2
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 1.1e-113 414.5 410 52.2
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.1e-113 414.5 449 51.0
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 7.8e-112 408.3 380 54.7
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.2e-109 398.7 399 50.1
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.6e-102 375.6 442 46.8
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 4.4e-99 365.9 411 45.5
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 4.2e-81 306.2 281 56.9
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.0e-79 301.6 423 43.3
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 6.9e-76 288.9 369 43.1
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 3.2e-73 280.0 263 54.8
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 1.3e-71 274.6 364 42.0
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 4.8e-69 266.2 217 59.0
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 2.0e-67 260.8 285 50.9
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 4.9e-66 256.1 400 39.5
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 3.8e-58 229.9 466 34.1
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 2.5e-57 227.3 407 38.1
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 1.0e-47 195.3 315 37.1
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 1.4e-36 158.3 165 53.3
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 2.0e-27 127.9 180 42.2
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 1.5e-25 121.7 467 29.6
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 4.7e-24 116.7 381 29.7
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.8e-23 114.8 118 51.7
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 1.5e-22 111.7 386 28.5
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 5.7e-22 109.8 134 44.8
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 5.7e-22 109.8 338 32.5
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 1.6e-19 101.7 53 81.1
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 2.8e-16 90.9 234 33.8
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 7.5e-06 56.2 206 27.7


User provided reference genes

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