Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 4.9e-193 677.6 326 100.0
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 5.1e-182 641.0 326 94.2
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 1.4e-179 632.9 327 93.0
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 1.7e-177 625.9 326 92.0
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 1.6e-175 619.4 327 91.4
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 2.1e-175 619.0 326 90.8
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 4.3e-173 611.3 324 91.4
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 2.6e-170 602.1 324 89.5
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 4.9e-169 597.8 331 87.6
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 1.1e-168 596.7 325 88.0
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 3.2e-168 595.1 331 87.6
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 3.2e-168 595.1 331 87.6
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 4.2e-168 594.7 331 87.0
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 5.3e-163 577.8 326 83.7
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 3.7e-156 555.1 307 84.4
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 7.7e-154 547.4 322 81.1
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 2.9e-153 545.4 326 78.8
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 1.1e-152 543.5 305 82.6
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 2.5e-152 542.3 300 84.0
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 3.2e-152 542.0 326 78.5
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 5.5e-152 541.2 304 82.6
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.6e-151 539.7 321 80.4
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.7e-151 538.9 326 78.2
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 4.6e-151 538.1 299 83.9
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 4.6e-151 538.1 322 78.3
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.0e-150 537.0 326 77.9
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 1.4e-150 536.6 295 84.1
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 1.8e-150 536.2 327 77.1
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 2.3e-150 535.8 298 83.6
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 3.9e-150 535.0 325 77.5
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 5.1e-150 534.6 325 78.5
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 8.8e-150 533.9 325 77.5
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 8.8e-150 533.9 329 76.9
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 1.5e-149 533.1 326 77.0
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.5e-149 533.1 326 77.0
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.5e-149 533.1 326 77.0
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 1.5e-149 533.1 325 77.8
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.0e-149 532.7 326 76.7
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 2.6e-149 532.3 325 77.2
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 3.3e-149 531.9 302 82.5
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 3.3e-149 531.9 298 82.2
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 5.7e-149 531.2 297 82.2
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 9.7e-149 530.4 326 76.7
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 1.3e-148 530.0 324 77.8
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 1.7e-148 529.6 296 82.4
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 1.7e-148 529.6 308 80.5
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.8e-148 528.9 326 76.4
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 3.7e-148 528.5 307 79.8
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 8.2e-148 527.3 313 78.0
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 1.1e-147 526.9 307 79.5
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 1.8e-147 526.2 326 76.1
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 2.4e-147 525.8 312 78.8
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 3.1e-147 525.4 295 82.7
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 4.1e-147 525.0 317 77.0
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 5.3e-147 524.6 323 76.5
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 6.9e-147 524.2 322 76.4
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 1.2e-146 523.5 305 79.0
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 1.5e-146 523.1 334 75.1
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 2.0e-146 522.7 319 76.8
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 2.6e-146 522.3 321 77.3
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 3.4e-146 521.9 309 79.6
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 5.9e-146 521.2 299 81.3
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 7.7e-146 520.8 334 74.9
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 1.0e-145 520.4 334 74.6
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 2.2e-145 519.2 329 74.8
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 3.8e-145 518.5 331 74.6
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 1.1e-144 516.9 328 75.3
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 1.9e-144 516.2 322 76.1
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 7.2e-144 514.2 299 80.9
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 1.0e-142 510.4 302 78.5
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 2.3e-142 509.2 303 78.5
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 1.5e-141 506.5 345 72.5
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 2.8e-140 502.3 297 77.1
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 3.7e-140 501.9 299 78.9
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 4.8e-140 501.5 295 78.6
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 3.1e-139 498.8 300 76.0
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 1.3e-137 493.4 362 67.7
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 4.7e-135 485.0 299 74.9
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 6.5e-129 464.5 280 78.2
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 1.3e-124 450.3 283 76.0
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 4.5e-122 441.8 329 68.1
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 7.7e-122 441.0 268 76.1
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 1.7e-121 439.9 253 79.1
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 3.8e-121 438.7 265 78.1
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 2.5e-120 436.0 304 67.1
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 4.2e-120 435.3 298 66.8
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 5.5e-120 434.9 241 83.0
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 7.2e-120 434.5 273 73.3
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.2e-119 433.7 263 77.6
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 1.2e-119 433.7 241 83.0
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.5e-117 426.8 275 75.6
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 3.4e-117 425.6 241 80.9
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 7.5e-117 424.5 332 62.7
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 5.9e-114 414.8 293 65.2
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 6.6e-113 411.4 291 65.6
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 6.8e-110 401.4 254 75.2
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 1.9e-104 383.3 246 74.4
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 3.3e-96 355.9 204 79.4
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 5.8e-93 345.1 208 77.4
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.9e-92 342.8 182 85.2
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.5e-88 330.5 225 69.8
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 3.4e-85 319.3 240 67.1
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 1.5e-72 277.3 308 47.7
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 6.2e-71 271.9 179 70.9
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 3.8e-68 262.7 255 51.4
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 2.7e-66 256.5 207 64.3
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.3e-60 237.7 137 82.5
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 3.2e-59 233.0 134 82.1
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 2.5e-56 223.4 194 59.8
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 9.0e-54 214.9 272 44.9
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.2e-45 188.0 275 37.8
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 4.5e-45 186.0 179 59.2
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 7.6e-45 185.3 165 60.6
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 4.2e-43 179.5 279 39.8
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 2.1e-42 177.2 126 68.3
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 3.8e-28 129.8 272 32.7
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 6.1e-26 122.5 157 42.0
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 1.1e-19 101.7 61 75.4
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 3.6e-18 96.7 80 58.8
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 3.3e-16 90.1 57 75.4
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 2.7e-10 70.5 54 57.4
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.6e-10 70.1 42 76.2
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 1.2e-08 65.1 41 70.7


User provided reference genes

Program Settings