Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10005488m.g Eutrema salsugineum HOM05D011091 ORTHO05D013198 1.6e-47 192.6 111 100.0
BcaC03g18399 Brassica carinata HOM05D011091 ORTHO05D013198 4.8e-31 137.9 107 65.4
C02p64780 Brassica napus HOM05D011091 ORTHO05D013198 4.8e-31 137.9 107 65.4
BolC2t12539H Brassica oleracea HOM05D011091 ORTHO05D013198 4.8e-31 137.9 107 65.4
CARHR280880 Cardamine hirsuta HOM05D011091 ORTHO05D013198 1.4e-30 136.3 111 64.9
AT5G66815 Arabidopsis thaliana HOM05D011091 ORTHO05D013198 6.9e-30 134.0 113 71.7
A02p44390 Brassica napus HOM05D011091 ORTHO05D013198 9.0e-30 133.7 107 64.5
BcaB07g29654 Brassica carinata HOM05D011091 ORTHO05D013198 2.0e-29 132.5 107 72.0
AL8G44630 Arabidopsis lyrata HOM05D011091 ORTHO05D013198 7.6e-29 130.6 113 68.1
Carub.0008s2769 Capsella rubella HOM05D011091 ORTHO05D013198 5.5e-27 124.4 109 67.0
BraA02t09356Z Brassica rapa HOM05D011091 ORTHO05D013198 9.3e-27 123.6 107 62.6
BraA07t29437Z Brassica rapa HOM05D011091 ORTHO05D013198 2.3e-25 119.0 111 65.8
A07p17100 Brassica napus HOM05D011091 ORTHO05D013198 6.7e-25 117.5 111 64.9
Sp2g29860 Schrenkiella parvula HOM05D011091 ORTHO05D013198 2.8e-23 112.1 111 59.5
BolC7t43026H Brassica oleracea HOM05D011091 ORTHO05D013198 6.2e-23 110.9 107 64.5
C07p24960 Brassica napus HOM05D011091 ORTHO05D013198 4.0e-22 108.2 107 63.6
BcaB02g09987 Brassica carinata HOM05D011091 ORTHO05D013198 6.7e-17 90.9 107 57.0
BcaC06g34751 Brassica carinata HOM05D011091 ORTHO05D013198 1.5e-08 63.2 70 60.0
Thecc.01G053400 Theobroma cacao HOM05D008581 ORTHO05D009966 8.2e-07 57.4 113 34.5
Cfa004000 Carpinus fangiana HOM05D008581 ORTHO05D009966 5.3e-06 54.7 117 30.8
Manes.13G126600 Manihot esculenta HOM05D008581 ORTHO05D009966 6.9e-06 54.3 119 29.4
Potri.005G136800 Populus trichocarpa HOM05D008581 ORTHO05D009966 6.9e-06 54.3 108 36.1


User provided reference genes

Program Settings