Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 1.8e-94 349.4 188 100.0
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 9.8e-61 237.3 188 69.7
Carub.0008s2154 Capsella rubella HOM05D010173 ORTHO05D007801 1.7e-41 173.3 215 49.3
AL269U10022 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 1.8e-38 163.3 206 53.9
AL3G41380 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 1.8e-38 163.3 206 53.9
AL3G41390 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 1.8e-38 163.3 206 53.9
AL269U10040 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.1e-38 162.5 203 54.7
AL269U10050 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.1e-38 162.5 203 54.2
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 3.1e-38 162.5 189 55.6
AL269U10030 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.6e-37 159.5 203 54.2
AT5G60840 Arabidopsis thaliana HOM05D010173 ORTHO05D007801 3.4e-37 159.1 202 52.5
BcaNung02618 Brassica carinata HOM05D010173 ORTHO05D007801 1.4e-35 153.7 184 53.3
C07p44600 Brassica napus HOM05D010173 ORTHO05D007801 1.4e-35 153.7 184 53.3
BolC7t44981H Brassica oleracea HOM05D010173 ORTHO05D007801 1.4e-35 153.7 184 53.3
AL3G41370 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 7.1e-35 151.4 150 57.3
AL8G37440 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 9.2e-35 151.0 227 49.3
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 7.3e-32 141.4 138 58.0
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 6.2e-31 138.3 162 51.2
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 1.4e-30 137.1 150 54.0
CARHR274520 Cardamine hirsuta HOM05D010173 ORTHO05D007801 1.8e-30 136.7 198 49.0
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 6.8e-30 134.8 142 57.0
BcaNung02617 Brassica carinata HOM05D010173 ORTHO05D007801 5.8e-29 131.7 197 47.2
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.2e-28 129.8 190 44.2
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.0e-21 106.7 203 39.4
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 1.7e-17 93.6 86 51.2
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 3.9e-17 92.4 151 37.7
AL3G41400 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 8.7e-17 91.3 212 40.6
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.1e-16 90.9 142 40.1
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 1.9e-16 90.1 135 40.7
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 3.3e-16 89.4 80 51.2
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 4.3e-16 89.0 101 44.6
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 5.6e-16 88.6 123 42.3
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 5.6e-16 88.6 141 39.0
AL215U10060 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 7.3e-16 88.2 202 41.1
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 7.3e-16 88.2 138 39.1
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 9.6e-16 87.8 101 44.6
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.6e-15 87.0 71 53.5
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.6e-15 87.0 138 39.1
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 2.1e-15 86.7 135 40.0
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 2.1e-15 86.7 161 41.0
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 2.8e-15 86.3 158 35.4
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 1.1e-14 84.3 135 38.5
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 1.4e-14 84.0 151 35.8
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.4e-14 84.0 141 38.3
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.8e-14 83.6 135 33.3
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 3.1e-14 82.8 122 41.0
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 5.3e-14 82.0 61 59.0
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 5.3e-14 82.0 71 50.7
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 6.9e-14 81.6 138 36.2
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 1.2e-13 80.9 141 38.3
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 1.5e-13 80.5 85 44.7
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 1.5e-13 80.5 68 51.5
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 2.6e-13 79.7 98 41.8
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 2.6e-13 79.7 100 46.0
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 5.8e-13 78.6 108 40.7
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 7.6e-13 78.2 61 57.4
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 7.6e-13 78.2 177 33.9
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 3.8e-12 75.9 127 36.2
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 4.9e-12 75.5 104 39.4
TPR.G15310 Trifolium pratense HOM05D007643 ORTHO05D007801 4.9e-12 75.5 109 40.4
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 6.4e-12 75.1 96 41.7
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 8.4e-12 74.7 110 35.5
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 8.4e-12 74.7 121 42.1
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 8.4e-12 74.7 133 35.3
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 1.1e-11 74.3 176 31.2
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 1.4e-11 73.9 135 34.1
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 4.2e-11 72.4 116 37.9
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 7.1e-11 71.6 131 35.1
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 7.1e-11 71.6 131 35.1
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 1.6e-10 70.5 123 35.0
Manes.06G079602 Manihot esculenta HOM05D007643 ORTHO05D007801 2.7e-10 69.7 62 51.6
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 6.0e-10 68.6 145 33.8
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 7.9e-10 68.2 90 42.2
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 1.0e-09 67.8 113 37.2
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 1.0e-09 67.8 69 44.9
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 1.3e-09 67.4 89 40.4
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 1.3e-09 67.4 66 40.9
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 1.8e-09 67.0 114 35.1
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 1.8e-09 67.0 126 34.9
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 2.3e-09 66.6 62 45.2
Os09g0473966 Oryza sativa ssp. japonica HOM05D007643 ORTHO05D007801 3.0e-09 66.2 57 52.6
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 3.9e-09 65.9 107 41.1
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 5.1e-09 65.5 116 34.5
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 1.1e-08 64.3 79 38.0
ATR0691G209 Amborella trichopoda HOM05D007643 ORTHO05D007801 2.5e-08 63.2 63 46.0
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 2.5e-08 63.2 106 35.8
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 5.6e-08 62.0 62 41.9
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 7.4e-08 61.6 62 45.2
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 7.4e-08 61.6 104 35.6
HPP92_019460 Vanilla planifolia HOM05D007643 ORTHO05D007801 1.6e-07 60.5 135 33.3
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 2.8e-07 59.7 118 33.1
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 3.7e-07 59.3 122 29.5
Zm00001eb101340 Zea mays HOM05D007643 ORTHO05D007801 1.4e-06 57.4 58 41.4
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.8e-06 57.0 106 34.9
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 2.4e-06 56.6 76 36.8
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 3.1e-06 56.2 107 33.6
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 6.9e-06 55.1 108 31.5


User provided reference genes

Program Settings