Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10002994m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.2e-70 269.6 126 100.0
Thhalv10002986m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 2.4e-39 165.6 107 76.6
C03p01630 Brassica napus HOM05D003012 ORTHO05D002833 4.6e-38 161.4 125 64.8
BcaB01g05799 Brassica carinata HOM05D003012 ORTHO05D002833 1.5e-36 156.4 125 63.2
BolC3t12715H Brassica oleracea HOM05D003012 ORTHO05D002833 1.5e-36 156.4 108 70.4
BolC3t12716H Brassica oleracea HOM05D003012 ORTHO05D002833 1.5e-36 156.4 108 69.4
Thhalv10002720m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 9.5e-36 153.7 107 70.1
BcaB01g05798 Brassica carinata HOM05D003012 ORTHO05D002833 1.2e-35 153.3 108 68.5
A03p01280 Brassica napus HOM05D003012 ORTHO05D002833 1.2e-35 153.3 108 68.5
BraA03t09509Z Brassica rapa HOM05D003012 ORTHO05D002833 1.2e-35 153.3 108 68.5
A03p01270 Brassica napus HOM05D003012 ORTHO05D002833 6.8e-34 147.5 126 62.7
AL1G49830 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 9.9e-33 143.7 124 58.1
BcaC09g49331 Brassica carinata HOM05D003012 ORTHO05D002833 1.7e-32 142.9 125 55.2
C01p37850 Brassica napus HOM05D003012 ORTHO05D002833 1.7e-32 142.9 125 55.2
BolC1t03746H Brassica oleracea HOM05D003012 ORTHO05D002833 1.7e-32 142.9 125 55.2
Sp2g03330 Schrenkiella parvula HOM05D003012 ORTHO05D002833 2.9e-32 142.1 108 61.1
SpUn0101_0030 Schrenkiella parvula HOM05D003012 ORTHO05D002833 2.9e-32 142.1 108 61.1
BraA03t09507Z Brassica rapa HOM05D003012 ORTHO05D002833 4.9e-32 141.4 138 58.0
BcaC02g08873 Brassica carinata HOM05D003012 ORTHO05D002833 8.4e-32 140.6 108 60.2
A01p29940 Brassica napus HOM05D003012 ORTHO05D002833 8.4e-32 140.6 125 54.4
A04p15380 Brassica napus HOM05D003012 ORTHO05D002833 8.4e-32 140.6 108 60.2
C03p01640 Brassica napus HOM05D003012 ORTHO05D002833 8.4e-32 140.6 95 70.5
C04p49610 Brassica napus HOM05D003012 ORTHO05D002833 8.4e-32 140.6 108 60.2
BraA01t03124Z Brassica rapa HOM05D003012 ORTHO05D002833 8.4e-32 140.6 125 54.4
BraA04t17178Z Brassica rapa HOM05D003012 ORTHO05D002833 8.4e-32 140.6 108 60.2
BolC4t26548H Brassica oleracea HOM05D003012 ORTHO05D002833 1.1e-31 140.2 108 60.2
BcaC06g31836 Brassica carinata HOM05D003012 ORTHO05D002833 4.1e-31 138.3 124 53.2
Sp7g03610 Schrenkiella parvula HOM05D003012 ORTHO05D002833 5.4e-31 137.9 109 57.8
Thhalv10028054m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 7.1e-31 137.5 125 52.8
AT5G38440 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 9.2e-31 137.1 127 53.5
BcaC08g44379 Brassica carinata HOM05D003012 ORTHO05D002833 4.6e-30 134.8 107 57.0
C06p18130 Brassica napus HOM05D003012 ORTHO05D002833 4.6e-30 134.8 107 57.0
BolC6t37021H Brassica oleracea HOM05D003012 ORTHO05D002833 4.6e-30 134.8 107 57.0
BraA07t29670Z Brassica rapa HOM05D003012 ORTHO05D002833 4.6e-30 134.8 107 57.0
BcaB06g27716 Brassica carinata HOM05D003012 ORTHO05D002833 1.3e-29 133.3 108 56.5
Carub.0007s3750 Capsella rubella HOM05D003012 ORTHO05D002833 3.0e-29 132.1 127 48.0
BcaB02g08008 Brassica carinata HOM05D003012 ORTHO05D002833 5.1e-29 131.3 108 55.6
Carub.0007s1290 Capsella rubella HOM05D003012 ORTHO05D002833 1.5e-28 129.8 107 57.0
Carub.0007s3746 Capsella rubella HOM05D003012 ORTHO05D002833 1.9e-28 129.4 124 49.2
A10p22280 Brassica napus HOM05D003012 ORTHO05D002833 3.3e-28 128.6 112 58.0
Carub.0001s3274 Capsella rubella HOM05D003012 ORTHO05D002833 1.2e-27 126.7 107 55.1
CARHR291870 Cardamine hirsuta HOM05D003012 ORTHO05D002833 2.8e-27 125.6 126 49.2
BcaC04g18834 Brassica carinata HOM05D003012 ORTHO05D002833 4.7e-27 124.8 105 58.1
C09p60100 Brassica napus HOM05D003012 ORTHO05D002833 4.7e-27 124.8 105 58.1
BolC9t58845H Brassica oleracea HOM05D003012 ORTHO05D002833 4.7e-27 124.8 105 58.1
BraA10t44287Z Brassica rapa HOM05D003012 ORTHO05D002833 6.2e-27 124.4 105 59.0
AL7G52140 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 8.1e-27 124.0 108 52.8
BcaB03g12743 Brassica carinata HOM05D003012 ORTHO05D002833 1.1e-26 123.6 125 50.4
BraA08t33773Z Brassica rapa HOM05D003012 ORTHO05D002833 1.1e-26 123.6 125 49.6
A07p19700 Brassica napus HOM05D003012 ORTHO05D002833 1.4e-26 123.2 121 49.6
A08p18200 Brassica napus HOM05D003012 ORTHO05D002833 1.4e-26 123.2 130 48.5
BcaB01g05811 Brassica carinata HOM05D003012 ORTHO05D002833 2.4e-26 122.5 101 58.4
AL4G12990 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 3.1e-26 122.1 127 48.8
Carub.0005s0810 Capsella rubella HOM05D003012 ORTHO05D002833 5.2e-26 121.3 108 53.7
AT5G38435 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 8.9e-26 120.6 108 51.9
A03p57360 Brassica napus HOM05D003012 ORTHO05D002833 8.9e-26 120.6 107 57.0
BraA03t14802Z Brassica rapa HOM05D003012 ORTHO05D002833 8.9e-26 120.6 107 57.0
C07p55570 Brassica napus HOM05D003012 ORTHO05D002833 2.0e-25 119.4 107 57.0
BcaC06g32680 Brassica carinata HOM05D003012 ORTHO05D002833 2.6e-25 119.0 107 57.0
C05p59030 Brassica napus HOM05D003012 ORTHO05D002833 4.4e-25 118.2 108 55.6
BolC7t46036H Brassica oleracea HOM05D003012 ORTHO05D002833 5.8e-25 117.9 107 56.1
Carub.0001s3273 Capsella rubella HOM05D003012 ORTHO05D002833 5.8e-25 117.9 107 54.2
Carub.0007s3747 Capsella rubella HOM05D003012 ORTHO05D002833 5.8e-25 117.9 126 47.6
Thhalv10029254m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 9.9e-25 117.1 126 48.4
A10p22270 Brassica napus HOM05D003012 ORTHO05D002833 4.9e-24 114.8 108 53.7
BraA10t44286Z Brassica rapa HOM05D003012 ORTHO05D002833 4.9e-24 114.8 108 53.7
AT2G23148 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 8.4e-24 114.0 128 47.7
C03p88180 Brassica napus HOM05D003012 ORTHO05D002833 8.4e-24 114.0 125 46.4
C09p60090 Brassica napus HOM05D003012 ORTHO05D002833 8.4e-24 114.0 108 53.7
BolC3t21126H Brassica oleracea HOM05D003012 ORTHO05D002833 8.4e-24 114.0 125 46.4
BolC9t58844H Brassica oleracea HOM05D003012 ORTHO05D002833 8.4e-24 114.0 108 53.7
BraA04t18436Z Brassica rapa HOM05D003012 ORTHO05D002833 2.4e-23 112.5 125 48.0
CARHR243790 Cardamine hirsuta HOM05D003012 ORTHO05D002833 5.4e-23 111.3 114 50.0
A04p29720 Brassica napus HOM05D003012 ORTHO05D002833 9.3e-23 110.5 108 52.8
Carub.0004s0236 Capsella rubella HOM05D003012 ORTHO05D002833 1.2e-22 110.2 127 44.9
CARHR243780 Cardamine hirsuta HOM05D003012 ORTHO05D002833 1.2e-22 110.2 114 46.5
AT2G23142 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 3.5e-22 108.6 128 45.3
BcaB08g36803 Brassica carinata HOM05D003012 ORTHO05D002833 3.5e-22 108.6 104 53.8
C02p40340 Brassica napus HOM05D003012 ORTHO05D024319 1.8e-18 96.3 100 47.0
AL4G13000 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 2.4e-18 95.9 115 44.3
BolC2t10064H Brassica oleracea HOM05D003012 ORTHO05D024319 2.4e-18 95.9 110 45.5
BraA02t07528Z Brassica rapa HOM05D003012 ORTHO05D024319 9.0e-18 94.0 109 44.0
Thhalv10011968m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 4.2e-15 85.1 95 45.3
Thhalv10027181m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.3e-13 80.1 127 37.8
Thhalv10027009m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.9e-12 76.3 127 37.0
Thhalv10027484m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 2.5e-12 75.9 127 37.0
BcaC04g18833 Brassica carinata HOM05D003012 ORTHO05D002833 4.3e-12 75.1 108 40.7
Thhalv10023144m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 9.6e-12 73.9 126 35.7
THA.LOC104816440 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 9.6e-12 73.9 111 36.0
Aa31LG3G3270 Aethionema arabicum HOM05D003012 ORTHO05D002833 6.2e-11 71.2 109 38.5
CARHR061160 Cardamine hirsuta HOM05D003012 ORTHO05D002833 6.2e-11 71.2 53 56.6
AT2G06090 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 1.1e-10 70.5 99 38.4
AT5G04350 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 1.4e-10 70.1 98 39.8
THA.LOC104816439 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 1.4e-10 70.1 123 33.3
Carub.0006s0330 Capsella rubella HOM05D003012 ORTHO05D002833 3.1e-10 68.9 98 40.8
Thhalv10023189m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 1.2e-09 67.0 126 33.3
Aa31LG3G3280 Aethionema arabicum HOM05D003012 ORTHO05D002833 4.5e-09 65.1 109 34.9
BraA04t18054Z Brassica rapa HOM05D003012 ORTHO05D002833 7.6e-09 64.3 90 40.0
AT5G27238 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 9.9e-09 63.9 108 37.0
A04p25510 Brassica napus HOM05D003012 ORTHO05D002833 9.9e-09 63.9 97 37.1
Aa31LG3G3260 Aethionema arabicum HOM05D003012 ORTHO05D002833 1.3e-08 63.5 92 41.3
AL6G26180 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 1.3e-08 63.5 116 36.2
AL3G43730 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 2.2e-08 62.8 98 34.7
AL4G15572 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 2.2e-08 62.8 107 33.6
C04p62660 Brassica napus HOM05D003012 ORTHO05D002833 2.2e-08 62.8 90 40.0
BolC4t27747H Brassica oleracea HOM05D003012 ORTHO05D002833 2.2e-08 62.8 90 40.0
Carub.0003s2723 Capsella rubella HOM05D003012 ORTHO05D002833 3.8e-08 62.0 98 34.7
AL3G43740 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 4.9e-08 61.6 98 34.7
Carub.0003s2721 Capsella rubella HOM05D003012 ORTHO05D002833 4.9e-08 61.6 98 34.7
Thhalv10017540m.g Eutrema salsugineum HOM05D003012 ORTHO05D002833 4.9e-08 61.6 113 38.1
Aa31LG3G3210 Aethionema arabicum HOM05D003012 ORTHO05D002833 6.4e-08 61.2 101 37.6
AT3G26880 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 6.4e-08 61.2 106 34.0
Carub.0007s3117 Capsella rubella HOM05D003012 ORTHO05D002833 6.4e-08 61.2 98 39.8
Sp6g38380 Schrenkiella parvula HOM05D003012 ORTHO05D002833 6.4e-08 61.2 96 37.5
Aa31LG3G3290 Aethionema arabicum HOM05D003012 ORTHO05D002833 8.4e-08 60.8 100 34.0
CARHR084970 Cardamine hirsuta HOM05D003012 ORTHO05D002833 1.1e-07 60.5 91 36.3
C09p13920 Brassica napus HOM05D003012 ORTHO05D002833 1.4e-07 60.1 109 38.5
A09p11820 Brassica napus HOM05D003012 ORTHO05D002833 1.9e-07 59.7 109 38.5
Sp1g10390 Schrenkiella parvula HOM05D003012 ORTHO05D002833 2.4e-07 59.3 99 37.4
AL1G22950 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 3.2e-07 58.9 100 33.0
THA.LOC104816681 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 3.2e-07 58.9 86 34.9
AT1G11765 Arabidopsis thaliana HOM05D003012 ORTHO05D002833 4.2e-07 58.5 100 34.0
BcaNung05794 Brassica carinata HOM05D000149 ORTHO05D000076 4.2e-07 58.5 74 41.9
C04p62630 Brassica napus HOM05D003012 ORTHO05D002833 4.2e-07 58.5 90 36.7
Carub.0006s0250 Capsella rubella HOM05D003012 ORTHO05D002833 4.2e-07 58.5 126 30.2
A04p25490 Brassica napus HOM05D003012 ORTHO05D002833 5.5e-07 58.2 90 36.7
BraA04t18052Z Brassica rapa HOM05D003012 ORTHO05D002833 5.5e-07 58.2 90 36.7
BolC4t27745H Brassica oleracea HOM05D003012 ORTHO05D002833 7.1e-07 57.8 91 36.3
CARHR209720 Cardamine hirsuta HOM05D003012 ORTHO05D002833 7.1e-07 57.8 110 31.8
C04p62640 Brassica napus HOM05D003012 ORTHO05D002833 1.2e-06 57.0 89 37.1
CARHR034080 Cardamine hirsuta HOM05D003012 ORTHO05D002833 1.2e-06 57.0 55 52.7
CARHR147970 Cardamine hirsuta HOM05D008305 ORTHO05D002833 1.2e-06 57.0 106 30.2
Aa31LG11G5250 Aethionema arabicum HOM05D013273 ORTHO05D002833 1.6e-06 56.6 73 38.4
AL5G15850 Arabidopsis lyrata HOM05D003012 ORTHO05D002833 3.5e-06 55.5 106 30.2
Carub.0003s2720 Capsella rubella HOM05D003012 ORTHO05D002833 4.6e-06 55.1 84 36.9
Lalb_Chr15g0076131 Lupinus albus HOM05D000256 ORTHO05D000119 7.9e-06 54.3 76 42.1


User provided reference genes

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