Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 4.8e-82 307.8 154 100.0
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 3.4e-75 285.0 152 92.8
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 2.8e-74 282.0 152 93.4
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 4.8e-74 281.2 152 91.4
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 6.3e-74 280.8 152 92.8
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 6.3e-74 280.8 152 92.8
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 1.8e-73 279.3 152 93.4
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 1.8e-73 279.3 152 92.8
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 3.1e-73 278.5 152 90.8
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 2.0e-72 275.8 152 90.8
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 5.9e-72 274.2 152 89.5
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 1.0e-71 273.5 152 89.5
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 8.0e-69 263.8 151 86.8
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 2.3e-63 245.7 149 83.2
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 7.5e-59 230.7 141 80.9
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 2.9e-42 175.6 136 64.0
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 8.3e-42 174.1 145 61.4
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 1.9e-41 172.9 145 64.8
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 2.4e-41 172.6 136 63.2
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 9.2e-41 170.6 145 63.4
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 9.2e-41 170.6 145 63.4
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 2.1e-40 169.5 148 62.2
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 6.0e-40 167.9 152 59.9
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 1.3e-39 166.8 152 57.2
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 1.3e-39 166.8 145 59.3
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 2.3e-39 166.0 130 63.8
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 3.0e-39 165.6 152 59.2
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 3.9e-39 165.2 157 58.6
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 3.9e-39 165.2 142 58.5
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 5.1e-39 164.9 162 55.6
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 5.1e-39 164.9 146 61.6
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 1.1e-38 163.7 162 54.9
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 1.9e-38 162.9 155 57.4
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 3.3e-38 162.2 152 59.2
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 4.3e-38 161.8 143 58.7
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 5.6e-38 161.4 124 66.1
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 9.5e-38 160.6 145 60.7
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 9.5e-38 160.6 147 55.8
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 9.5e-38 160.6 143 58.0
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 2.1e-37 159.5 146 57.5
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 2.1e-37 159.5 146 57.5
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 3.6e-37 158.7 142 57.0
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 3.6e-37 158.7 141 57.4
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 8.1e-37 157.5 143 58.0
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 8.1e-37 157.5 147 57.8
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 8.1e-37 157.5 145 55.9
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 1.1e-36 157.1 149 57.7
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 1.8e-36 156.4 149 54.4
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 2.3e-36 156.0 137 59.9
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 2.3e-36 156.0 136 57.4
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 2.3e-36 156.0 128 61.7
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 2.3e-36 156.0 128 61.7
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 3.1e-36 155.6 154 56.5
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 5.2e-36 154.8 132 57.6
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 5.2e-36 154.8 127 60.6
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 5.2e-36 154.8 124 63.7
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 5.2e-36 154.8 150 55.3
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 8.9e-36 154.1 152 53.9
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 1.2e-35 153.7 153 56.2
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 1.2e-35 153.7 156 53.8
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 1.5e-35 153.3 121 62.0
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 2.0e-35 152.9 147 57.8
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 2.6e-35 152.5 153 56.2
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 7.6e-35 151.0 127 60.6
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 7.6e-35 151.0 128 60.9
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 1.3e-34 150.2 153 55.6
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 1.3e-34 150.2 146 56.2
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 1.3e-34 150.2 146 56.2
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 1.7e-34 149.8 128 60.9
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.7e-34 149.8 128 60.9
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 1.7e-34 149.8 144 56.2
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 2.9e-34 149.1 140 55.0
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 4.9e-34 148.3 124 62.1
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 6.4e-34 147.9 142 52.1
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 8.4e-34 147.5 145 55.9
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 1.4e-33 146.7 140 55.0
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 2.4e-33 146.0 148 55.4
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 2.4e-33 146.0 128 59.4
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 4.1e-33 145.2 142 56.3
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 4.1e-33 145.2 121 57.0
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 4.1e-33 145.2 131 57.3
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 5.4e-33 144.8 148 52.0
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 5.4e-33 144.8 121 59.5
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 7.8e-32 141.0 118 61.0
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 1.3e-31 140.2 143 51.7
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 4.3e-30 135.2 153 49.0
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 7.3e-30 134.4 110 61.8
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 1.2e-29 133.7 117 57.3
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 2.1e-29 132.9 150 49.3
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 2.8e-29 132.5 67 97.0
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 8.1e-29 131.0 141 52.5
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 6.8e-28 127.9 132 50.0
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 2.6e-27 125.9 154 48.7
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 7.6e-27 124.4 124 52.4
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 1.7e-26 123.2 92 67.4
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 2.2e-26 122.9 107 58.9
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 8.4e-26 120.9 125 48.0
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 2.7e-24 115.9 87 67.8
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 7.6e-19 97.8 143 38.5
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.9e-17 93.2 80 61.2
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 1.9e-17 93.2 96 52.1
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 2.3e-15 86.3 116 38.8
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 4.0e-12 75.5 112 39.3
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 2.1e-08 63.2 116 32.8
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 2.1e-08 63.2 104 37.5
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 3.5e-08 62.4 62 53.2
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 4.6e-08 62.0 78 44.9
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 7.9e-08 61.2 62 53.2
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 3.9e-07 58.9 111 31.5
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 2.5e-06 56.2 107 32.7
ATR0414G002 Amborella trichopoda HOM05D007363 ORTHO05D009018 7.4e-06 54.7 143 31.5
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 7.4e-06 54.7 112 31.2


User provided reference genes

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