Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 5.8e-127 457.6 237 100.0
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 3.8e-118 428.3 237 92.4
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 9.3e-117 423.7 237 90.3
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 1.6e-116 422.9 237 90.3
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 1.6e-116 422.9 237 90.3
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 6.0e-116 421.0 237 89.9
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 6.7e-115 417.5 236 89.8
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 4.3e-114 414.8 237 87.3
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 6.2e-113 411.0 238 89.9
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 1.2e-111 406.8 237 88.2
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 7.6e-111 404.1 237 86.1
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 2.2e-110 402.5 227 88.5
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 2.5e-101 372.5 237 79.7
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 1.3e-86 323.6 235 67.7
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 5.0e-86 321.6 235 67.7
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 1.9e-85 319.7 237 67.5
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 5.5e-85 318.2 235 67.2
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 5.5e-85 318.2 235 67.2
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 7.2e-85 317.8 236 66.5
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.8e-83 313.2 237 66.7
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.8e-83 313.2 234 66.7
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 1.5e-82 310.1 237 65.8
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 2.6e-82 309.3 232 67.7
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 2.6e-82 309.3 233 64.8
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 2.2e-81 306.2 224 68.3
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 2.2e-81 306.2 237 64.1
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 2.8e-81 305.8 231 66.7
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.7e-81 305.4 236 64.4
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 8.2e-81 304.3 236 64.4
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 1.4e-80 303.5 234 65.0
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 1.8e-80 303.1 237 63.7
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.8e-80 303.1 234 65.0
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 2.4e-80 302.8 254 61.0
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 3.1e-80 302.4 232 65.1
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 4.1e-80 302.0 236 65.3
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 7.0e-80 301.2 226 64.6
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 7.0e-80 301.2 230 66.1
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 9.1e-80 300.8 237 61.6
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 1.5e-79 300.1 237 64.1
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 4.5e-79 298.5 237 63.3
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 5.9e-79 298.1 232 63.4
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 7.7e-79 297.7 237 63.3
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.0e-78 297.4 226 65.5
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 1.0e-78 297.4 230 63.0
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 1.0e-78 297.4 240 64.2
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.7e-78 296.6 237 62.0
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 1.7e-78 296.6 214 69.6
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 2.2e-78 296.2 227 64.3
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 2.9e-78 295.8 239 61.9
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 2.9e-78 295.8 222 65.8
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 6.5e-78 294.7 236 60.6
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 1.9e-77 293.1 240 61.2
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 1.9e-77 293.1 237 62.0
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 3.2e-77 292.4 237 61.6
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 4.2e-77 292.0 236 59.7
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 9.4e-77 290.8 227 63.4
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 1.2e-76 290.4 224 63.8
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.2e-76 290.4 234 60.3
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 1.2e-76 290.4 231 61.5
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 1.2e-76 290.4 222 64.0
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 1.6e-76 290.0 234 62.0
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 2.7e-76 289.3 220 65.9
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 6.1e-76 288.1 234 59.8
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 6.1e-76 288.1 237 60.3
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 1.0e-75 287.3 233 60.9
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 1.0e-75 287.3 234 59.4
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.0e-75 287.3 234 59.4
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 1.0e-75 287.3 226 61.9
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.4e-75 287.0 237 60.3
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 2.3e-75 286.2 219 64.4
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 2.3e-75 286.2 234 59.0
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 8.8e-75 284.3 232 62.5
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 1.5e-74 283.5 225 62.2
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.5e-74 283.5 240 58.3
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 2.6e-74 282.7 235 61.3
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 1.3e-73 280.4 231 60.2
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 1.7e-73 280.0 229 60.3
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 3.1e-72 275.8 229 59.0
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 9.1e-72 274.2 229 58.5
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 9.1e-72 274.2 236 60.6
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 2.0e-71 273.1 238 57.6
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 7.7e-71 271.2 229 62.4
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 1.7e-70 270.0 229 59.4
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 6.5e-70 268.1 222 59.9
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.1e-69 267.3 237 57.8
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 1.5e-69 266.9 207 61.8
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 9.4e-69 264.2 222 59.9
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 1.6e-68 263.5 221 58.4
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 4.7e-68 261.9 240 57.9
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 8.0e-68 261.2 213 59.2
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 1.0e-67 260.8 239 54.8
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 2.0e-66 256.5 225 58.7
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 6.3e-65 251.5 255 52.9
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 7.7e-55 218.0 231 48.5
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 8.6e-54 214.5 224 50.4
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 2.4e-48 196.4 152 65.1
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 2.4e-48 196.4 152 63.2
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 4.1e-48 195.7 184 54.9
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.3e-46 190.7 227 44.5
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 4.0e-43 179.1 212 42.0
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 7.5e-42 174.9 159 56.0
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 3.7e-41 172.6 149 57.0
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 6.4e-41 171.8 228 40.8
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 3.5e-39 166.0 236 43.2
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 1.1e-37 161.0 139 54.0
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 8.9e-35 151.4 219 37.4
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 3.4e-34 149.4 217 35.5
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 9.8e-34 147.9 218 34.9
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 5.1e-30 135.6 119 57.1
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.1e-27 126.3 102 60.8
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 1.3e-25 120.9 164 40.2
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 7.1e-24 115.2 110 55.5
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 5.1e-22 109.0 72 68.1
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 5.2e-19 99.0 208 31.7
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 4.9e-09 65.9 70 54.3
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 4.9e-09 65.9 70 54.3
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 3.0e-06 56.6 43 58.1
Rhsim07G0033200 Rhododendron simsii HOM05D006089 ORTHO05D007345 8.7e-06 55.1 91 33.0


User provided reference genes

Program Settings