Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 1.5e-195 686.0 363 100.0
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 1.4e-135 486.9 298 88.9
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 1.9e-129 466.5 297 84.8
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 3.3e-129 465.7 297 85.9
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 1.2e-128 463.8 296 84.8
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 8.0e-128 461.1 296 84.5
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 1.1e-127 460.7 296 84.5
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 1.2e-126 457.2 296 83.8
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 4.9e-125 451.8 297 82.2
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 6.6e-122 441.4 275 86.5
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 1.9e-100 370.2 270 71.5
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 5.1e-98 362.1 211 90.0
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 4.2e-92 342.4 254 73.2
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 2.0e-86 323.6 258 68.2
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 1.1e-84 317.8 258 64.3
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 3.2e-84 316.2 302 58.9
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.6e-83 313.9 297 58.9
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 3.5e-83 312.8 297 58.9
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 6.0e-83 312.0 259 63.3
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 7.9e-83 311.6 269 61.7
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 3.3e-81 306.2 265 63.4
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 5.6e-81 305.4 299 57.2
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 7.4e-81 305.1 297 57.9
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 9.6e-81 304.7 256 62.5
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 1.6e-80 303.9 293 57.0
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 6.9e-79 298.5 257 61.9
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 1.2e-78 297.7 233 68.2
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 1.5e-78 297.4 269 61.0
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 1.5e-78 297.4 257 62.3
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 2.0e-78 297.0 247 64.0
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 4.5e-78 295.8 268 61.2
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 5.8e-78 295.4 257 61.5
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 7.6e-78 295.0 257 61.1
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 1.3e-77 294.3 258 62.0
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 2.9e-77 293.1 257 61.1
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 2.9e-77 293.1 298 54.0
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 4.9e-77 292.4 254 63.0
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 6.5e-77 292.0 261 61.3
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 1.2e-75 287.7 246 62.2
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 3.5e-75 286.2 261 56.7
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 6.0e-75 285.4 246 63.4
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 1.0e-74 284.6 278 57.9
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 3.9e-74 282.7 243 62.6
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 3.9e-74 282.7 267 59.6
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 5.1e-74 282.3 248 59.7
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 5.1e-74 282.3 263 58.2
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 4.8e-72 275.8 288 57.3
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 6.9e-71 271.9 247 60.3
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 5.5e-68 262.3 317 49.5
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 7.2e-68 261.9 284 53.5
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 4.6e-67 259.2 235 60.4
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 6.7e-66 255.4 210 66.2
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 6.7e-66 255.4 203 65.5
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 2.4e-63 246.9 215 61.9
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 6.9e-63 245.4 248 52.0
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 9.1e-63 245.0 171 79.5
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 1.2e-62 244.6 251 57.0
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 5.0e-61 239.2 212 60.4
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 3.2e-60 236.5 210 58.1
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 6.7e-58 228.8 242 52.1
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 5.3e-55 219.2 207 57.5
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 2.3e-50 203.8 248 45.6
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 8.5e-45 185.3 269 39.8
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 3.2e-44 183.3 143 66.4
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 6.7e-42 175.6 306 40.5
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 8.3e-32 142.1 113 64.6
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 1.4e-31 141.4 100 73.0
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 3.3e-28 130.2 86 75.6
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 6.1e-27 125.9 125 57.6
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 1.2e-25 121.7 233 32.6
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 1.1e-23 115.2 97 60.8
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 2.1e-19 100.9 98 56.1
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 4.4e-17 93.2 101 53.5
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 6.8e-10 69.3 334 23.7
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 4.4e-09 66.6 147 34.7
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 7.0e-07 59.3 127 33.1
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 6.0e-06 56.2 58 56.9


User provided reference genes

Program Settings