Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 6.4e-50 200.3 91 100.0
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 2.2e-42 175.3 91 87.9
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 2.2e-42 175.3 91 87.9
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 2.9e-42 174.9 91 87.9
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 2.9e-42 174.9 91 87.9
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 1.1e-41 172.9 91 86.8
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 1.4e-41 172.6 91 86.8
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 1.2e-40 169.5 91 87.9
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.9e-38 162.2 91 82.4
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 1.8e-36 155.6 91 81.3
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 2.0e-35 152.1 91 79.1
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 1.7e-34 149.1 87 80.5
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 3.8e-34 147.9 74 86.5
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 1.6e-32 142.5 91 80.2
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 2.1e-24 115.5 89 68.5
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 7.9e-24 113.6 89 67.4
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.1e-17 93.2 88 51.1
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.4e-17 92.8 85 57.6
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 1.9e-17 92.4 85 51.8
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 1.9e-17 92.4 85 51.8
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 3.2e-17 91.7 85 49.4
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.2e-17 91.3 89 50.6
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 5.5e-17 90.9 85 51.8
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 5.5e-17 90.9 88 52.3
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 7.2e-17 90.5 88 53.4
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.2e-16 89.7 85 56.5
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 1.6e-16 89.4 85 50.6
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 1.6e-16 89.4 85 51.8
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 1.6e-16 89.4 85 51.8
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 1.6e-16 89.4 85 51.8
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.6e-16 89.4 85 51.8
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.6e-16 88.2 92 51.1
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 4.6e-16 87.8 89 51.7
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.6e-16 87.8 89 49.4
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 1.0e-15 86.7 83 49.4
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.8e-15 85.9 81 53.1
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.3e-15 85.5 90 51.1
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 3.0e-15 85.1 90 48.9
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 3.0e-15 85.1 84 47.6
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 3.9e-15 84.7 88 45.5
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.9e-15 84.7 85 48.2
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 5.1e-15 84.3 82 46.3
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 5.1e-15 84.3 89 46.1
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 6.7e-15 84.0 84 46.4
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 6.7e-15 84.0 80 50.0
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 6.7e-15 84.0 89 49.4
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 8.8e-15 83.6 85 47.1
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 8.8e-15 83.6 85 47.1
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 8.8e-15 83.6 85 47.1
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.1e-14 83.2 85 52.9
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-14 83.2 88 44.3
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-14 83.2 83 47.0
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 1.1e-14 83.2 88 44.3
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 1.1e-14 83.2 83 47.0
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 1.1e-14 83.2 90 51.1
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 1.9e-14 82.4 84 45.2
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 3.3e-14 81.6 91 48.4
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-14 81.6 80 47.5
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 3.3e-14 81.6 80 47.5
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.3e-14 81.3 90 41.1
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.7e-14 80.9 91 45.1
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 1.3e-13 79.7 82 47.6
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-13 79.3 89 47.2
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-13 79.3 83 43.4
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 1.7e-13 79.3 85 48.2
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.2e-13 79.0 58 55.2
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 2.2e-13 79.0 85 48.2
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 2.8e-13 78.6 81 44.4
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 2.8e-13 78.6 89 44.9
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.8e-13 77.8 84 45.2
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 4.8e-13 77.8 81 48.1
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 4.8e-13 77.8 91 44.0
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 6.3e-13 77.4 95 43.2
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 6.3e-13 77.4 83 48.2
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-12 76.6 82 45.1
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.8e-12 75.9 70 55.7
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 1.8e-12 75.9 93 43.0
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 2.4e-12 75.5 72 50.0
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 2.4e-12 75.5 82 45.1
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 3.1e-12 75.1 82 48.8
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 4.1e-12 74.7 90 44.4
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 4.1e-12 74.7 82 37.8
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 9.1e-12 73.6 85 41.2
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 9.1e-12 73.6 82 39.0
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.2e-11 73.2 68 51.5
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-11 72.8 63 46.0
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-11 72.8 63 44.4
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.6e-11 72.0 81 44.4
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 3.4e-11 71.6 89 41.6
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.4e-11 71.6 88 40.9
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 4.5e-11 71.2 63 44.4
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 3.8e-10 68.2 90 42.2
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 9.4e-09 63.5 71 46.5
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 3.6e-08 61.6 84 40.5
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 7.9e-08 60.5 59 44.1
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 1.8e-07 59.3 67 44.8
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 1.8e-07 59.3 96 38.5
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 6.7e-07 57.4 55 43.6


User provided reference genes

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