Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10001168m.g Eutrema salsugineum HOM05D013731 ORTHO05D011863 1.5e-75 286.2 157 100.0
Thhalv10001151m.g Eutrema salsugineum HOM05D013731 ORTHO05D011863 4.2e-73 278.1 157 97.5
Sp2g11170 Schrenkiella parvula HOM05D013731 ORTHO05D011863 1.5e-33 146.7 164 54.9
Sp2g11160 Schrenkiella parvula HOM05D013731 ORTHO05D011863 1.2e-30 137.1 165 51.5
AT1G47760 Arabidopsis thaliana HOM05D016617 ORTHO05D011863 4.2e-17 92.0 151 41.1
THA.LOC104827724 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 6.1e-16 88.2 175 36.0
AL1G54120 Arabidopsis lyrata HOM05D016617 ORTHO05D011863 2.3e-15 86.3 151 41.1
Aa31LG9G6580 Aethionema arabicum HOM05D000203 ORTHO05D000135 1.5e-14 83.6 147 40.1
THA.LOC104806121 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 5.7e-14 81.6 179 33.5
Sp2g06870 Schrenkiella parvula HOM05D013731 ORTHO05D011863 1.3e-13 80.5 158 42.4
SpUn0014_0010 Schrenkiella parvula HOM05D013731 ORTHO05D011863 1.3e-13 80.5 158 42.4
SpUn0076_0010 Schrenkiella parvula HOM05D013731 ORTHO05D011863 1.3e-13 80.5 158 42.4
SpUn0310_0010 Schrenkiella parvula HOM05D013731 ORTHO05D011863 1.3e-13 80.5 158 42.4
AL1G54190 Arabidopsis lyrata HOM05D016617 ORTHO05D011863 1.1e-12 77.4 151 39.1
QL05p059059 Quercus lobata HOM05D000203 ORTHO05D000135 1.4e-12 77.0 167 35.3
Duzib192G0997 Durio zibethinus HOM05D000203 ORTHO05D000135 1.6e-11 73.6 167 31.1
AT5G46320 Arabidopsis thaliana HOM05D013731 ORTHO05D011863 2.0e-11 73.2 127 40.2
Aa31sc309G30 Aethionema arabicum HOM05D000203 ORTHO05D000135 2.7e-11 72.8 161 36.0
Thecc.06G153500 Theobroma cacao HOM05D000203 ORTHO05D000135 3.5e-11 72.4 166 30.1
THA.LOC104820707 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 4.5e-11 72.0 166 30.1
Aa31LG10G6940 Aethionema arabicum HOM05D000203 ORTHO05D000135 5.9e-11 71.6 147 34.7
AL8G12110 Arabidopsis lyrata HOM05D013731 ORTHO05D011863 5.9e-11 71.6 132 40.9
Potri.004G131100 Populus trichocarpa HOM05D000203 ORTHO05D000135 5.9e-11 71.6 166 34.3
Sed0017436 Sechium edule HOM05D000203 ORTHO05D000135 1.3e-10 70.5 160 33.1
Gohir.A06G136800 Gossypium hirsutum HOM05D000203 ORTHO05D000135 3.8e-10 68.9 169 31.4
TWI09G1461 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 5.0e-10 68.6 172 34.3
Prupe.4G077800 Prunus persica HOM05D000203 ORTHO05D000135 8.6e-10 67.8 167 34.1
MELO3C002723.2 Cucumis melo HOM05D000203 ORTHO05D000135 1.1e-09 67.4 162 31.5
RcHm_v2.0_Chr5g0013531 Rosa chinensis HOM05D000203 ORTHO05D000135 1.1e-09 67.4 164 31.1
SpUn0037_0040 Schrenkiella parvula HOM05D027938 ORTHO05D011863 1.1e-09 67.4 94 46.8
Gorai.010G165500 Gossypium raimondii HOM05D000203 ORTHO05D000135 1.9e-09 66.6 169 30.8
Sp2g06850 Schrenkiella parvula HOM05D027938 ORTHO05D011863 1.9e-09 66.6 90 47.8
Sp3g05620 Schrenkiella parvula HOM05D000203 ORTHO05D000135 1.9e-09 66.6 167 30.5
CiPaw.10G093200 Carya illinoinensis HOM05D000203 ORTHO05D000135 3.3e-09 65.9 167 34.1
Manes.17G067800 Manihot esculenta HOM05D000203 ORTHO05D000135 3.3e-09 65.9 164 29.9
Sp4g16710 Schrenkiella parvula HOM05D000203 ORTHO05D000135 3.3e-09 65.9 168 28.0
Duzib160G0196 Durio zibethinus HOM05D000203 ORTHO05D000135 4.3e-09 65.5 166 29.5
MD10G1264500 Malus domestica HOM05D000203 ORTHO05D000135 4.3e-09 65.5 165 34.5
CARHR081210 Cardamine hirsuta HOM05D000203 ORTHO05D000135 5.6e-09 65.1 165 31.5
Ciclev10017472m.g Citrus clementina HOM05D000203 ORTHO05D000135 5.6e-09 65.1 167 31.1
MD05G1287100 Malus domestica HOM05D000203 ORTHO05D000135 5.6e-09 65.1 165 33.9
CARHR213130 Cardamine hirsuta HOM05D000203 ORTHO05D000135 7.3e-09 64.7 164 27.4
ClCG03G006990 Citrullus lanatus HOM05D000203 ORTHO05D000135 9.5e-09 64.3 162 32.1
Gohir.D06G141900 Gossypium hirsutum HOM05D000203 ORTHO05D000135 1.2e-08 63.9 169 30.2
Aa31LG10G7780 Aethionema arabicum HOM05D000203 ORTHO05D000135 1.6e-08 63.5 161 32.3
CARHR128530 Cardamine hirsuta HOM05D000203 ORTHO05D000135 1.6e-08 63.5 166 28.3
AUR62027600 Chenopodium quinoa HOM05D000203 ORTHO05D000135 2.8e-08 62.8 169 33.1
PSO541G1095 Papaver somniferum HOM05D000203 ORTHO05D000135 2.8e-08 62.8 161 31.7
PSO675G7023 Papaver somniferum HOM05D000203 ORTHO05D000135 2.8e-08 62.8 155 31.6
Carub.0001s3667 Capsella rubella HOM05D016617 ORTHO05D011863 3.6e-08 62.4 151 32.5
Carub.0004s1611 Capsella rubella HOM05D000203 ORTHO05D000135 3.6e-08 62.4 149 30.9
CARHR213110 Cardamine hirsuta HOM05D000203 ORTHO05D000135 3.6e-08 62.4 146 32.9
C03p42320 Brassica napus HOM05D000203 ORTHO05D000135 4.7e-08 62.0 170 31.2
BolC3t16505H Brassica oleracea HOM05D000203 ORTHO05D000135 4.7e-08 62.0 170 31.2
Carub.0001s3661 Capsella rubella HOM05D016617 ORTHO05D011863 4.7e-08 62.0 151 32.5
AL3G17740 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 6.1e-08 61.6 170 31.8
FvH4_3g36320 Fragaria vesca HOM05D000203 ORTHO05D000135 6.1e-08 61.6 165 29.7
PSO675G2437 Papaver somniferum HOM05D000203 ORTHO05D000135 6.1e-08 61.6 161 30.4
Ah.06g196150 Amaranthus hybridus HOM05D000203 ORTHO05D000135 8.0e-08 61.2 160 30.0
BraA03t12658Z Brassica rapa HOM05D000203 ORTHO05D000135 8.0e-08 61.2 169 30.8
Carub.0003s0614 Capsella rubella HOM05D000203 ORTHO05D000135 8.0e-08 61.2 171 31.6
Cpa.g.sc25.93 Carica papaya HOM05D000203 ORTHO05D000135 8.0e-08 61.2 159 31.4
AL4G30410 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 1.8e-07 60.1 163 27.0
AT2G34440 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 1.8e-07 60.1 163 26.4
FvH4_3g05940 Fragaria vesca HOM05D000203 ORTHO05D000135 1.8e-07 60.1 165 29.7
FAN11G3627 Fragaria x ananassa HOM05D000203 ORTHO05D000135 1.8e-07 60.1 165 29.7
THA.LOC104814692 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 2.3e-07 59.7 164 28.0
CsaV3_1G032570 Cucumis sativus L. HOM05D000203 ORTHO05D000135 4.0e-07 58.9 162 28.4
Eucgr.D00312 Eucalyptus grandis HOM05D000203 ORTHO05D000135 5.2e-07 58.5 164 30.5
Thhalv10017825m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 5.2e-07 58.5 165 25.5
FAN21G2663 Fragaria x ananassa HOM05D000203 ORTHO05D000135 5.2e-07 58.5 165 29.1
PSO541G4057 Papaver somniferum HOM05D000203 ORTHO05D000135 5.2e-07 58.5 161 29.8
AT3G66656 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 6.8e-07 58.2 171 29.8
A04p26360 Brassica napus HOM05D000203 ORTHO05D000135 6.8e-07 58.2 167 25.7
BraA04t18140Z Brassica rapa HOM05D000203 ORTHO05D000135 6.8e-07 58.2 167 25.7
HanXRQChr14g0456481 Helianthus annuus HOM05D000203 ORTHO05D000135 6.8e-07 58.2 155 34.2
C04p63760 Brassica napus HOM05D000203 ORTHO05D000135 8.9e-07 57.8 168 25.6
CARHR213100 Cardamine hirsuta HOM05D000203 ORTHO05D000135 8.9e-07 57.8 162 27.2
Eucgr.D00311 Eucalyptus grandis HOM05D000203 ORTHO05D000135 8.9e-07 57.8 163 30.1
Thhalv10022154m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 8.9e-07 57.8 167 30.5
TWI15G1149 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 1.2e-06 57.4 166 29.5
TAR628G1507 Trochodendron aralioides HOM05D000203 ORTHO05D000135 1.2e-06 57.4 163 31.3
Carub.0001s3675 Capsella rubella HOM05D016617 ORTHO05D011863 1.5e-06 57.0 149 30.2
Cpa.g.sc17.38 Carica papaya HOM05D000203 ORTHO05D000135 2.0e-06 56.6 161 29.2
Sabra04G0086800 Salix brachista HOM05D000203 ORTHO05D000135 2.0e-06 56.6 161 32.9
Ah.16g100610 Amaranthus hybridus HOM05D000203 ORTHO05D000135 2.6e-06 56.2 160 29.4
Carub.0004s0584 Capsella rubella HOM05D016617 ORTHO05D011863 2.6e-06 56.2 140 31.4
PSO675G4825 Papaver somniferum HOM05D000203 ORTHO05D000135 2.6e-06 56.2 160 29.4
Potri.004G130900 Populus trichocarpa HOM05D000203 ORTHO05D000135 2.6e-06 56.2 162 34.0
BolC4t27843H Brassica oleracea HOM05D000203 ORTHO05D000135 4.4e-06 55.5 174 24.7
PSO541G1434 Papaver somniferum HOM05D000203 ORTHO05D000135 4.4e-06 55.5 160 29.4
Cfa000970 Carpinus fangiana HOM05D000203 ORTHO05D000135 7.5e-06 54.7 168 31.0
AUR62010161 Chenopodium quinoa HOM05D000203 ORTHO05D000135 7.5e-06 54.7 163 31.3
Eucgr.D00313 Eucalyptus grandis HOM05D000203 ORTHO05D000135 7.5e-06 54.7 163 29.4
BcaC06g31481 Brassica carinata HOM05D013731 ORTHO05D011863 9.8e-06 54.3 89 44.9
Carub.0008s0159 Capsella rubella HOM05D027938 ORTHO05D011863 9.8e-06 54.3 79 43.0
Lj9C337T7 Lonicera japonica HOM05D000203 ORTHO05D000135 9.8e-06 54.3 155 32.9
TAR628G0844 Trochodendron aralioides HOM05D000203 ORTHO05D000135 9.8e-06 54.3 162 30.2


User provided reference genes

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