Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.1e-54 215.3 98 100.0
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 4.8e-43 177.6 98 78.6
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 1.3e-40 169.5 98 74.5
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 1.3e-40 169.5 98 74.5
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 3.8e-40 167.9 98 77.6
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 2.1e-38 162.2 98 72.4
A06p46700 Brassica napus HOM05D008628 ORTHO05D010443 4.6e-38 161.0 98 71.4
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 2.0e-36 155.6 95 70.5
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 2.8e-35 151.8 98 65.3
Carub.0008s0288 Capsella rubella HOM05D008628 ORTHO05D010443 3.7e-35 151.4 95 70.5
BraA06t27542Z Brassica rapa HOM05D008628 ORTHO05D010443 6.3e-35 150.6 98 68.4
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 8.2e-35 150.2 98 70.4
AL5G30140 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 3.6e-30 134.8 98 62.2
Thhalv10011141m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.0e-29 133.3 98 62.2
Thhalv10011104m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 3.0e-29 131.7 98 63.3
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 4.8e-27 124.4 98 59.2
AT3G50020 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 3.1e-26 121.7 98 55.1
BcaC06g34456 Brassica carinata HOM05D008628 ORTHO05D010443 7.0e-26 120.6 70 78.6
BcaC06g31563 Brassica carinata HOM05D008628 ORTHO05D010443 1.2e-25 119.8 70 78.6
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 5.9e-25 117.5 98 58.2
Thhalv10011021m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.0e-24 116.7 98 55.1
Thhalv10011101m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.0e-24 116.7 98 55.1
Thhalv10011057m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 5.0e-24 114.4 98 55.1
Thhalv10011083m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 2.5e-23 112.1 98 54.1
Rhsim10G0168600 Rhododendron simsii HOM05D008628 ORTHO05D010443 8.0e-22 107.1 97 49.5
AT5G45277 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 1.8e-21 105.9 70 70.0
AL5G30120 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 1.1e-20 103.2 77 63.6
Rhsim11G0040900 Rhododendron simsii HOM05D008628 ORTHO05D010443 3.7e-19 98.2 104 45.2
vmacro00116 Vaccinium macrocarpon HOM05D008628 ORTHO05D010443 4.8e-19 97.8 97 45.4
Rhsim11G0041100 Rhododendron simsii HOM05D008628 ORTHO05D010443 1.1e-18 96.7 97 44.3
SpUn1030_0010 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.0e-16 90.1 70 62.9
Sp5g12080 Schrenkiella parvula HOM05D002032 ORTHO05D002247 1.7e-16 89.4 67 61.2
Rhsim11G0041000 Rhododendron simsii HOM05D008628 ORTHO05D010443 3.8e-16 88.2 97 43.3
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 2.3e-13 79.0 91 42.9
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 5.2e-13 77.8 91 45.1
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 5.2e-13 77.8 91 45.1
Nn4g26614 Nelumbo nucifera HOM05D008628 ORTHO05D010443 1.2e-12 76.6 87 43.7
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 2.0e-12 75.9 98 45.9
Rhsim10G0168500 Rhododendron simsii HOM05D008628 ORTHO05D010443 5.7e-12 74.3 71 49.3
Rhsim10G0168400 Rhododendron simsii HOM05D008628 ORTHO05D010443 2.8e-11 72.0 69 47.8
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 1.1e-10 70.1 99 41.4
Sopen08g028370 Solanum pennellii HOM05D000015 ORTHO05D000803 1.4e-10 69.7 91 41.8
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 1.8e-10 69.3 82 43.9
Solyc08g080020.1 Solanum lycopersicum HOM05D009680 ORTHO05D010443 1.8e-10 69.3 91 41.8
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 2.4e-10 68.9 71 50.7
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 4.1e-10 68.2 69 47.8
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 2.0e-09 65.9 93 41.9
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 2.0e-09 65.9 93 41.9
PGSC0003DMG400026953 Solanum tuberosum HOM05D009680 ORTHO05D010443 2.7e-09 65.5 91 42.9
CAN.G630.4 Capsicum annuum HOM05D009680 ORTHO05D010443 4.5e-09 64.7 89 42.7
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 5.9e-09 64.3 89 41.6
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 5.9e-09 64.3 89 41.6
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 1.0e-08 63.5 89 41.6
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 1.7e-08 62.8 89 41.6
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 2.9e-08 62.0 89 38.2
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 2.9e-08 62.0 92 43.5
Peaxi162Scf79264g00001 Petunia axillaris HOM05D008628 ORTHO05D010443 2.9e-08 62.0 70 42.9
Thhalv10011055m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 5.0e-08 61.2 89 40.4
TWI34G0474 Tripterygium wilfordii HOM05D008628 ORTHO05D010443 6.5e-08 60.8 76 42.1
CAN.G1513.6 Capsicum annuum HOM05D009680 ORTHO05D010443 8.5e-08 60.5 80 37.5
AUR62006914 Chenopodium quinoa HOM05D008628 ORTHO05D010443 8.5e-08 60.5 63 46.0
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 1.5e-07 59.7 89 40.4
CAN.G630.3 Capsicum annuum HOM05D009680 ORTHO05D010443 4.2e-07 58.2 92 39.1
AUR62006912 Chenopodium quinoa HOM05D001004 ORTHO05D000653 4.2e-07 58.2 94 40.4
Dinv43966 Davidia involucrata HOM05D008628 ORTHO05D010443 4.2e-07 58.2 70 45.7
Lsat_1_v5_gn_7_33200 Lactuca sativa HOM05D001004 ORTHO05D000653 4.2e-07 58.2 96 42.7
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.5e-07 57.8 72 44.4
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 5.5e-07 57.8 90 43.3
Migut.L00816 Erythranthe guttata HOM05D001004 ORTHO05D000653 7.2e-07 57.4 80 41.2
Nitab4.5_0006484g0030 Nicotiana tabacum HOM05D009680 ORTHO05D000653 9.4e-07 57.0 91 35.2
MELO3C034586.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.2e-06 56.6 89 34.8
FAN12G3874 Fragaria x ananassa HOM05D001004 ORTHO05D000653 1.2e-06 56.6 74 44.6
Eucgr.B01966 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.7e-06 55.5 70 41.4
SalBow6G4960 Salvia bowleyana HOM05D001004 ORTHO05D000653 2.7e-06 55.5 69 47.8
Sed0016936 Sechium edule HOM05D001004 ORTHO05D000653 2.7e-06 55.5 69 43.5
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 3.6e-06 55.1 87 36.8
THA.LOC104805628 Tarenaya hassleriana HOM05D001004 ORTHO05D000653 3.6e-06 55.1 72 48.6
AL8G13540 Arabidopsis lyrata HOM05D002007 ORTHO05D005759 6.1e-06 54.3 29 65.5
Oeu017850.1 Olea europaea HOM05D001004 ORTHO05D000653 8.0e-06 53.9 90 42.2


User provided reference genes

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