Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10001140m.g Eutrema salsugineum HOM05D001084 ORTHO05D012462 3.7e-112 408.3 217 100.0
Thhalv10027573m.g Eutrema salsugineum HOM05D001084 ORTHO05D012462 6.6e-69 264.6 305 58.0
Sp5g06200 Schrenkiella parvula HOM05D001084 ORTHO05D012462 6.2e-51 204.9 311 47.3
BraA04t16121Z Brassica rapa HOM05D001084 ORTHO05D012462 4.9e-48 195.3 302 47.0
BcaC02g09806 Brassica carinata HOM05D001084 ORTHO05D012462 1.9e-47 193.4 302 46.4
BcaC02g09821 Brassica carinata HOM05D001084 ORTHO05D012462 1.9e-47 193.4 302 46.4
C04p36380 Brassica napus HOM05D001084 ORTHO05D012462 1.9e-47 193.4 302 46.4
BolC4t25177H Brassica oleracea HOM05D001084 ORTHO05D012462 1.9e-47 193.4 302 46.4
A04p04010 Brassica napus HOM05D001084 ORTHO05D012462 2.4e-47 193.0 299 47.2
BraA03t12459Z Brassica rapa HOM05D001084 ORTHO05D012462 2.7e-46 189.5 296 44.9
AT3G57100 Arabidopsis thaliana HOM05D001084 ORTHO05D012462 5.1e-45 185.3 303 45.2
AL5G38590 Arabidopsis lyrata HOM05D001084 ORTHO05D012462 1.1e-44 184.1 304 44.7
A03p32900 Brassica napus HOM05D001084 ORTHO05D012462 3.3e-44 182.6 289 45.0
BcaC01g04450 Brassica carinata HOM05D001084 ORTHO05D012462 4.3e-44 182.2 295 45.1
BolC3t16268H Brassica oleracea HOM05D001084 ORTHO05D012462 4.8e-43 178.7 295 44.7
C03p40030 Brassica napus HOM05D001084 ORTHO05D012462 2.4e-42 176.4 288 44.8
BcaC01g04547 Brassica carinata HOM05D001084 ORTHO05D012462 4.0e-42 175.6 268 45.1
Carub.0002s0368 Capsella rubella HOM05D001084 ORTHO05D012462 4.0e-42 175.6 267 47.9
C04p36220 Brassica napus HOM05D001084 ORTHO05D012462 2.2e-24 116.7 178 44.9
BcaB06g26055 Brassica carinata HOM05D001084 ORTHO05D012462 1.1e-18 97.8 172 44.8
BolC4t25157H Brassica oleracea HOM05D001084 ORTHO05D012462 4.5e-17 92.4 157 42.0
C04p36150 Brassica napus HOM05D001084 ORTHO05D032909 2.7e-14 83.2 167 37.7
BolC4t25184H Brassica oleracea HOM05D001084 ORTHO05D032909 2.7e-14 83.2 167 37.7
AL7G46690 Arabidopsis lyrata HOM05D001084 ORTHO05D012462 3.1e-10 69.7 94 48.9


User provided reference genes

Program Settings