Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 6.7e-81 303.9 147 100.0
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 7.1e-75 283.9 147 93.2
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 4.3e-72 274.6 148 90.5
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 7.4e-72 273.9 147 90.5
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 7.4e-72 273.9 147 90.5
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 4.8e-71 271.2 148 90.5
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 6.2e-71 270.8 148 90.5
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 2.4e-70 268.9 150 87.3
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 1.9e-67 259.2 149 85.2
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 2.1e-66 255.8 147 85.0
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 2.1e-66 255.8 147 85.0
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 4.6e-66 254.6 147 85.0
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 6.3e-63 244.2 147 83.7
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 9.0e-62 240.4 147 81.6
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 3.4e-61 238.4 147 80.3
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 1.5e-56 223.0 151 77.5
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 4.5e-53 211.5 112 91.1
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 1.1e-48 196.8 146 70.5
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 9.7e-48 193.7 157 66.2
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 3.7e-47 191.8 154 66.2
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 4.8e-47 191.4 155 65.2
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 2.4e-46 189.1 157 65.6
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 5.9e-45 184.5 155 63.2
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 1.7e-44 183.0 155 63.2
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 5.0e-44 181.4 155 62.6
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 1.4e-43 179.9 155 61.9
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 7.2e-43 177.6 155 61.3
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 1.0e-41 173.7 157 61.1
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 1.4e-41 173.3 157 60.5
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 8.8e-41 170.6 156 61.5
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 9.7e-40 167.2 156 60.9
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 5.0e-36 154.8 142 57.0
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 2.8e-31 139.0 160 50.0
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 6.3e-31 137.9 154 49.4
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 3.5e-29 132.1 155 47.7
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 1.3e-28 130.2 157 46.5
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 3.2e-27 125.6 159 45.3
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 5.5e-27 124.8 157 44.6
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 7.2e-27 124.4 156 44.2
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 1.2e-26 123.6 156 44.2
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 1.6e-26 123.2 155 44.5
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 3.6e-26 122.1 155 45.8
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 4.7e-26 121.7 156 43.6
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 3.0e-25 119.0 159 44.7
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 5.2e-25 118.2 155 45.8
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 8.8e-25 117.5 155 43.2
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 1.2e-24 117.1 156 46.2
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 1.5e-24 116.7 157 45.2
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 2.0e-24 116.3 155 46.5
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 2.0e-24 116.3 154 42.9
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 2.0e-24 116.3 150 44.0
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 2.6e-24 115.9 151 43.7
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.4e-24 115.5 151 43.7
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 4.4e-24 115.2 151 43.0
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 5.7e-24 114.8 156 42.9
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 5.7e-24 114.8 151 43.0
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 2.8e-23 112.5 193 38.9
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 3.7e-23 112.1 155 41.3
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 3.7e-23 112.1 155 41.3
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 6.3e-23 111.3 156 43.6
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 6.3e-23 111.3 164 42.1
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 6.3e-23 111.3 155 42.6
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 1.4e-22 110.2 156 44.9
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 2.4e-22 109.4 155 43.9
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 3.1e-22 109.0 151 40.4
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 9.1e-22 107.5 160 42.5
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 9.1e-22 107.5 156 44.2
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 9.1e-22 107.5 156 43.6
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 1.2e-21 107.1 155 43.2
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.6e-21 106.7 162 43.8
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 3.5e-21 105.5 155 42.6
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 4.5e-21 105.1 162 42.6
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 4.5e-21 105.1 156 44.2
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 4.5e-21 105.1 155 41.9
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 4.5e-21 105.1 153 45.1
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 7.7e-21 104.4 155 46.5
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 7.7e-21 104.4 155 42.6
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 1.3e-20 103.6 157 38.9
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 2.3e-20 102.8 155 42.6
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 3.8e-20 102.1 156 40.4
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 3.8e-20 102.1 158 41.8
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 6.6e-20 101.3 147 42.2
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 1.5e-19 100.1 153 41.8
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 1.9e-19 99.8 158 41.1
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.9e-19 99.8 155 40.0
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 2.5e-19 99.4 143 43.4
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 3.3e-19 99.0 161 40.4
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 3.3e-19 99.0 155 41.3
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 3.3e-19 99.0 161 38.5
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 4.2e-19 98.6 154 40.3
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 4.2e-19 98.6 154 40.3
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 7.2e-19 97.8 159 39.6
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 9.5e-19 97.4 157 38.2
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 9.5e-19 97.4 157 38.2
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 9.5e-19 97.4 156 39.7
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 9.5e-19 97.4 155 41.9
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 1.2e-18 97.1 155 41.3
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 1.6e-18 96.7 155 41.3
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 2.8e-18 95.9 161 41.6
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 4.7e-18 95.1 155 38.1
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 6.1e-18 94.7 156 38.5
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 6.1e-18 94.7 157 38.2
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 8.0e-18 94.4 158 40.5
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 8.0e-18 94.4 157 39.5
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 1.0e-17 94.0 103 47.6
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 3.0e-17 92.4 158 40.5
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 4.0e-17 92.0 122 42.6
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 4.0e-17 92.0 155 40.0
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 4.0e-17 92.0 99 45.5
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 5.2e-17 91.7 153 39.2
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 5.2e-17 91.7 155 39.4
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 6.8e-17 91.3 158 39.9
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 6.8e-17 91.3 157 38.2
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 6.8e-17 91.3 157 38.2
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 8.9e-17 90.9 158 36.7
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 1.5e-16 90.1 98 45.9
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 1.5e-16 90.1 155 38.7
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 4.4e-16 88.6 212 31.6
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 1.3e-15 87.0 146 36.3
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 3.7e-15 85.5 113 43.4
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 6.3e-15 84.7 157 38.9
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 8.3e-15 84.3 181 34.3
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 8.3e-15 84.3 238 29.4
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 8.3e-15 84.3 108 40.7
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 1.1e-14 84.0 158 35.4
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 1.8e-14 83.2 157 37.6
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 1.8e-14 83.2 115 40.9
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 2.4e-14 82.8 155 38.7
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 5.4e-14 81.6 182 33.5
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 9.2e-14 80.9 259 27.4
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 1.2e-13 80.5 157 38.2
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 3.5e-13 79.0 192 33.3
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 5.9e-13 78.2 101 40.6
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 2.9e-12 75.9 158 36.1
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 2.9e-12 75.9 57 57.9
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 5.0e-12 75.1 67 61.2
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 1.9e-11 73.2 137 35.0
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 2.5e-11 72.8 175 32.6
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 4.3e-11 72.0 113 35.4
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 4.3e-11 72.0 151 34.4
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 1.6e-10 70.1 159 33.3
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 2.8e-10 69.3 91 44.0
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.4e-09 67.0 92 44.6
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 3.4e-08 62.4 110 33.6
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 5.8e-08 61.6 68 45.6
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 9.8e-08 60.8 65 46.2
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 1.3e-07 60.5 62 50.0
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 2.9e-07 59.3 84 38.1
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 2.9e-07 59.3 217 27.2
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 4.9e-07 58.5 89 37.1
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 6.4e-07 58.2 89 38.2
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 1.1e-06 57.4 68 44.1
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 7.0e-06 54.7 89 38.2


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