Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 1.1e-74 283.1 131 100.0
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 2.2e-59 232.3 134 80.6
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 1.9e-58 229.2 133 82.7
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 1.3e-56 223.0 132 80.3
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 3.0e-56 221.9 133 81.2
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 8.6e-56 220.3 138 76.1
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 1.5e-55 219.5 135 80.0
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 1.9e-47 192.6 135 71.9
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 9.6e-47 190.3 135 71.1
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 2.1e-46 189.1 135 71.9
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 1.5e-44 183.0 137 69.3
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 2.4e-42 175.6 137 67.9
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 3.2e-34 148.7 127 57.5
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 5.4e-34 147.9 122 57.4
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 9.3e-34 147.1 130 54.6
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 1.6e-33 146.4 127 55.9
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 2.1e-33 146.0 126 55.6
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 7.9e-33 144.1 131 55.0
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 7.9e-33 144.1 117 59.0
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.7e-32 142.9 131 55.0
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 6.6e-32 141.0 122 57.4
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 1.1e-31 140.2 115 59.1
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 1.5e-31 139.8 110 60.9
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 4.3e-31 138.3 122 54.9
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 1.6e-30 136.3 115 56.5
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 2.8e-30 135.6 72 79.2
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 4.8e-30 134.8 73 75.3
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 4.8e-30 134.8 112 57.1
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 4.8e-30 134.8 147 49.7
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 1.1e-29 133.7 107 57.0
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 1.4e-29 133.3 110 56.4
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 5.3e-29 131.3 72 73.6
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 5.3e-29 131.3 89 66.3
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 9.0e-29 130.6 114 57.0
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 3.4e-28 128.6 109 57.8
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 2.2e-27 125.9 115 54.8
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 4.9e-27 124.8 89 60.7
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 6.4e-27 124.4 76 65.8
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 6.4e-27 124.4 67 73.1
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 1.4e-26 123.2 81 67.9
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 1.4e-26 123.2 95 61.1
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 2.4e-26 122.5 127 51.2
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 2.4e-26 122.5 131 50.4
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 7.1e-26 120.9 66 72.7
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 1.2e-25 120.2 72 69.4
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 2.1e-25 119.4 123 49.6
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 2.1e-25 119.4 135 48.1
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 3.5e-25 118.6 131 48.9
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 4.6e-25 118.2 115 52.2
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 6.0e-25 117.9 127 50.4
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 1.8e-24 116.3 128 47.7
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 1.5e-23 113.2 108 51.9
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.5e-23 113.2 92 55.4
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 2.5e-23 112.5 67 73.1
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 3.3e-23 112.1 127 46.5
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 4.3e-23 111.7 94 58.5
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 1.3e-22 110.2 91 60.4
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 2.8e-22 109.0 95 56.8
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 6.2e-22 107.8 91 58.2
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 8.1e-22 107.5 74 60.8
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 8.1e-22 107.5 91 57.1
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 4.0e-21 105.1 61 68.9
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 3.4e-20 102.1 127 45.7
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.0e-19 100.5 99 48.5
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.3e-19 100.1 99 50.5
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 2.2e-19 99.4 68 58.8
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 3.8e-19 98.6 103 50.5
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 4.9e-19 98.2 103 51.5
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 4.9e-19 98.2 93 50.5
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 8.4e-19 97.4 106 47.2
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 8.4e-19 97.4 66 66.7
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 2.5e-18 95.9 74 51.4
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 4.2e-18 95.1 89 44.9
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 7.9e-17 90.9 94 47.9
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 1.0e-16 90.5 63 57.1
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 1.8e-16 89.7 112 44.6
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 2.3e-16 89.4 98 51.0
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 1.1e-15 87.0 66 57.6
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 1.5e-15 86.7 52 67.3
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 2.5e-15 85.9 88 50.0
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 2.5e-15 85.9 66 62.1
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 4.3e-15 85.1 140 36.4
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 5.7e-15 84.7 81 50.6
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 2.8e-14 82.4 53 64.2
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 3.7e-14 82.0 103 43.7
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 4.1e-13 78.6 73 49.3
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 3.0e-08 62.4 30 83.3
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 8.7e-08 60.8 36 66.7
Peaxi162Scf00213g00947 Petunia axillaris HOM05D007770 ORTHO05D009827 5.7e-07 58.2 95 37.9


User provided reference genes

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