Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 5.4e-67 257.7 146 100.0
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 1.9e-59 232.6 149 91.3
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 1.9e-59 232.6 149 91.3
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 5.4e-59 231.1 149 90.6
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.2e-58 229.9 149 89.9
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.2e-58 229.9 149 89.9
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 3.9e-57 224.9 149 88.6
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 5.6e-56 221.1 149 87.9
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 1.8e-54 216.1 146 87.0
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 2.0e-53 212.6 147 85.7
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 3.2e-51 205.3 145 84.8
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 4.6e-50 201.4 144 81.2
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 3.1e-46 188.7 145 79.3
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 9.3e-43 177.2 144 75.7
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.8e-36 155.2 151 65.6
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 3.8e-36 155.2 151 65.6
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 8.5e-36 154.1 144 66.7
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.9e-35 152.9 151 65.6
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 4.2e-35 151.8 144 67.4
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 5.5e-35 151.4 163 63.2
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 7.2e-35 151.0 144 72.2
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 7.2e-35 151.0 150 66.0
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.2e-34 150.2 101 87.1
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.7e-34 149.1 156 61.5
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 6.1e-34 147.9 149 66.4
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 6.1e-34 147.9 153 62.7
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 1.0e-33 147.1 148 67.6
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 1.4e-33 146.7 151 64.9
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 3.0e-33 145.6 99 89.9
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.7e-33 144.4 139 67.6
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 6.7e-33 144.4 140 70.0
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 6.7e-33 144.4 115 78.3
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.1e-32 143.7 147 63.9
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.1e-32 143.7 101 84.2
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 1.5e-32 143.3 146 66.4
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.5e-32 143.3 148 64.2
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.9e-32 142.9 137 70.1
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 1.9e-32 142.9 100 88.0
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 2.5e-32 142.5 153 64.1
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 4.3e-32 141.7 149 65.1
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 4.3e-32 141.7 147 62.6
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 7.4e-32 141.0 100 81.0
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 7.4e-32 141.0 137 67.9
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.3e-31 140.2 148 62.8
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.3e-31 140.2 145 64.8
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 1.7e-31 139.8 151 61.6
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 2.2e-31 139.4 137 66.4
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 2.8e-31 139.0 100 84.0
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 3.7e-31 138.7 101 81.2
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 3.7e-31 138.7 119 74.8
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 3.7e-31 138.7 143 66.4
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 4.8e-31 138.3 152 63.2
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 4.8e-31 138.3 100 86.0
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 4.8e-31 138.3 95 86.3
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 6.3e-31 137.9 145 62.8
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 6.3e-31 137.9 144 63.2
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 8.2e-31 137.5 150 62.0
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 8.2e-31 137.5 101 79.2
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 1.1e-30 137.1 110 62.7
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 1.1e-30 137.1 121 71.9
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 1.4e-30 136.7 101 84.2
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 1.4e-30 136.7 99 85.9
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 1.8e-30 136.3 102 81.4
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.8e-30 136.3 141 68.1
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 2.4e-30 136.0 109 78.9
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 2.4e-30 136.0 106 78.3
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 4.1e-30 135.2 98 82.7
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 4.1e-30 135.2 98 81.6
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 4.1e-30 135.2 144 62.5
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 4.1e-30 135.2 100 78.0
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 5.3e-30 134.8 117 70.1
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 1.2e-29 133.7 100 82.0
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 1.5e-29 133.3 152 61.8
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 2.0e-29 132.9 115 77.4
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 2.0e-29 132.9 107 78.5
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.0e-29 132.9 119 59.7
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.6e-29 132.5 101 77.2
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 2.6e-29 132.5 101 77.2
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.6e-29 132.5 97 84.5
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 3.4e-29 132.1 144 63.9
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 1.0e-28 130.6 152 60.5
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 1.0e-28 130.6 149 61.1
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 1.7e-28 129.8 152 60.5
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 2.2e-28 129.4 100 82.0
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 2.9e-28 129.0 142 62.0
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 3.8e-28 128.6 144 60.4
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 5.0e-28 128.3 112 71.4
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 5.0e-28 128.3 78 75.6
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 8.5e-28 127.5 135 64.4
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 1.1e-27 127.1 99 79.8
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.9e-27 126.3 99 77.8
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 7.2e-27 124.4 105 76.2
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.2e-26 123.6 93 84.9
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 3.6e-26 122.1 98 78.6
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 4.7e-26 121.7 105 75.2
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 5.1e-25 118.2 104 73.1
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 7.0e-22 107.8 107 68.2
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 9.1e-22 107.5 100 68.0
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 1.2e-21 107.1 77 83.1
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 5.9e-21 104.8 84 78.6
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 8.5e-20 100.9 113 59.3
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 4.2e-19 98.6 74 78.4
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 9.4e-19 97.4 73 80.8
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 2.1e-18 96.3 81 72.8
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.0e-09 67.4 60 61.7


User provided reference genes

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