Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.K0006900 Theobroma cacao HOM05D002881 ORTHO05D000589 8.0e-126 453.8 227 100.0
Thecc.05G072600 Theobroma cacao HOM05D002881 ORTHO05D002983 2.3e-48 196.4 102 96.1
Thecc.10G123500 Theobroma cacao HOM05D000047 ORTHO05D000589 1.3e-35 154.1 87 87.4
Thecc.04G051200 Theobroma cacao HOM05D002881 ORTHO05D002983 3.8e-35 152.5 136 61.8
Thecc.03G050100 Theobroma cacao HOM05D000047 ORTHO05D000589 9.4e-34 147.9 182 46.2
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 5.2e-32 142.1 183 47.5
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 6.3e-30 135.2 183 47.0
Thecc.09G142100 Theobroma cacao HOM05D000047 ORTHO05D000589 1.3e-27 127.5 131 50.4
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 8.8e-24 114.8 192 43.2
Thecc.02G289400 Theobroma cacao HOM05D000414 ORTHO05D000276 8.6e-19 98.2 176 36.4
Duzib177G0032 Durio zibethinus HOM05D000047 ORTHO05D000589 3.0e-16 89.7 134 45.5
Ca_24076_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 1.4e-13 80.9 186 32.3
Ca_06964_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000589 8.6e-11 71.6 215 29.3
Ca_12999_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 8.6e-11 71.6 216 31.5
Ca_20345_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.9e-10 70.5 210 30.0
Thecc.05G094500 Theobroma cacao HOM05D000047 ORTHO05D000589 1.9e-10 70.5 32 96.9
Duzib268G0838 Durio zibethinus HOM05D000092 ORTHO05D000042 2.5e-10 70.1 79 46.8
Duzib160G0848 Durio zibethinus HOM05D000047 ORTHO05D000589 3.3e-10 69.7 188 35.1
Duzib248G1335 Durio zibethinus HOM05D000047 ORTHO05D000589 3.3e-10 69.7 148 36.5
Thecc.05G210100 Theobroma cacao HOM05D002881 ORTHO05D002983 5.6e-10 68.9 106 40.6
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 1.6e-09 67.4 131 38.2
COL.COLO4_25238 Corchorus olitorius HOM05D000047 ORTHO05D000589 2.1e-09 67.0 189 32.3
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 4.7e-09 65.9 170 32.4
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.4e-08 64.3 98 37.8
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 2.3e-08 63.5 207 30.4
TPR.G31129 Trifolium pratense HOM05D000047 ORTHO05D000589 2.3e-08 63.5 54 59.3
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 2.3e-08 63.5 176 32.4
Duzib168G2089 Durio zibethinus HOM05D000047 ORTHO05D000589 3.1e-08 63.2 52 57.7
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 4.0e-08 62.8 46 56.5
VMungo0331G0129 Vigna mungo HOM05D000047 ORTHO05D000589 6.8e-08 62.0 48 58.3
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 2.0e-07 60.5 123 34.1
Ca_05281_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.5e-07 58.5 225 26.7
Duzib268G0258 Durio zibethinus HOM05D000047 ORTHO05D000589 7.5e-07 58.5 46 60.9
TPR.G35324 Trifolium pratense HOM05D000047 ORTHO05D000589 9.8e-07 58.2 146 33.6
TPR.G5842 Trifolium pratense HOM05D000047 ORTHO05D000589 2.2e-06 57.0 50 52.0
TPR.G14980 Trifolium pratense HOM05D000047 ORTHO05D000589 2.9e-06 56.6 113 34.5
TPR.G4327 Trifolium pratense HOM05D000047 ORTHO05D000589 2.9e-06 56.6 178 29.2
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 4.9e-06 55.8 126 31.7
Ca_20044_v3 Cicer arietinum L. HOM05D010089 ORTHO05D012093 6.4e-06 55.5 69 43.5


User provided reference genes

Program Settings