Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.K0001900 Theobroma cacao HOM05D000311 ORTHO05D000183 4.9e-31 137.1 67 100.0
Duzib192G0408 Durio zibethinus HOM05D000311 ORTHO05D000183 1.6e-10 68.9 59 57.6
Gohir.D01G033132 Gossypium hirsutum HOM05D000311 ORTHO05D000183 8.2e-10 66.6 53 60.4
QL05p014014 Quercus lobata HOM05D000311 ORTHO05D000183 3.4e-08 61.2 60 48.3
Thecc.06G031600 Theobroma cacao HOM05D000311 ORTHO05D000183 5.8e-08 60.5 59 50.8
GSVIVG01013974001 Vitis vinifera HOM05D000311 ORTHO05D000183 5.8e-08 60.5 52 53.8
CiPaw.01G103100 Carya illinoinensis HOM05D000311 ORTHO05D000183 2.2e-07 58.5 60 48.3
Manes.11G059808 Manihot esculenta HOM05D000311 ORTHO05D000183 3.8e-07 57.8 68 47.1
Manes.11G060053 Manihot esculenta HOM05D000311 ORTHO05D000183 3.8e-07 57.8 68 47.1
Manes.11G060271 Manihot esculenta HOM05D000311 ORTHO05D000183 3.8e-07 57.8 68 47.1
Manes.11G060349 Manihot esculenta HOM05D000311 ORTHO05D000183 3.8e-07 57.8 68 47.1
Manes.11G060474 Manihot esculenta HOM05D000311 ORTHO05D000183 3.8e-07 57.8 68 47.1
QL05p013763 Quercus lobata HOM05D000311 ORTHO05D000183 3.8e-07 57.8 60 46.7
CiPaw.01G103400 Carya illinoinensis HOM05D000311 ORTHO05D000183 4.9e-07 57.4 60 48.3
Dinv30629 Davidia involucrata HOM05D000311 ORTHO05D000183 4.9e-07 57.4 52 50.0
BolC6t38469H Brassica oleracea HOM05D000311 ORTHO05D000183 8.4e-07 56.6 61 44.3
C06p33570 Brassica napus HOM05D000311 ORTHO05D000183 1.1e-06 56.2 61 44.3
QL05p085350 Quercus lobata HOM05D000311 ORTHO05D000183 1.1e-06 56.2 50 52.0
Cpa.g.sc10.147 Carica papaya HOM05D000311 ORTHO05D000183 1.4e-06 55.8 52 51.9
Manes.11G060021 Manihot esculenta HOM05D000311 ORTHO05D000183 1.4e-06 55.8 66 48.5
Manes.S095208 Manihot esculenta HOM05D000311 ORTHO05D000183 1.4e-06 55.8 68 47.1
QL05p014144 Quercus lobata HOM05D000311 ORTHO05D000183 1.4e-06 55.8 60 45.0
Manes.11G055400 Manihot esculenta HOM05D000311 ORTHO05D000183 1.9e-06 55.5 68 47.1
Cpa.g.sc10.146 Carica papaya HOM05D000311 ORTHO05D000183 2.5e-06 55.1 52 51.9
Manes.11G060223 Manihot esculenta HOM05D000311 ORTHO05D000183 2.5e-06 55.1 68 45.6
BcaB03g15370 Brassica carinata HOM05D000311 ORTHO05D000183 3.2e-06 54.7 57 49.1
Manes.11G060215 Manihot esculenta HOM05D000311 ORTHO05D000183 3.2e-06 54.7 68 45.6
Manes.11G060055 Manihot esculenta HOM05D000311 ORTHO05D000183 4.2e-06 54.3 66 43.9
Gohir.D04G061533 Gossypium hirsutum HOM05D000311 ORTHO05D000183 5.5e-06 53.9 59 47.5
COL.COLO4_11892 Corchorus olitorius HOM05D000311 ORTHO05D000183 7.1e-06 53.5 62 45.2
Manes.07G075300 Manihot esculenta HOM05D000311 ORTHO05D000183 7.1e-06 53.5 68 44.1
QL05p013123 Quercus lobata HOM05D000311 ORTHO05D000183 7.1e-06 53.5 60 43.3
QL05p013662 Quercus lobata HOM05D000311 ORTHO05D000183 7.1e-06 53.5 60 43.3
CARHR220400 Cardamine hirsuta HOM05D000311 ORTHO05D000183 9.3e-06 53.1 62 41.9


User provided reference genes

Program Settings