Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G188400 Theobroma cacao HOM05D000151 ORTHO05D000074 1.2e-61 239.6 111 100.0
Thecc.10G188800 Theobroma cacao HOM05D000151 ORTHO05D000074 2.1e-42 175.6 83 96.4
Thecc.03G003700 Theobroma cacao HOM05D000151 ORTHO05D000074 8.1e-31 137.1 83 75.9
Thecc.03G003800 Theobroma cacao HOM05D000151 ORTHO05D000074 8.1e-31 137.1 83 75.9
Thecc.01G383500 Theobroma cacao HOM05D000151 ORTHO05D000074 4.5e-29 131.3 83 69.9
Thecc.01G383700 Theobroma cacao HOM05D000151 ORTHO05D000074 4.5e-29 131.3 83 69.9
COL.COLO4_12589 Corchorus olitorius HOM05D000151 ORTHO05D000074 2.3e-25 119.0 83 63.9
COL.COLO4_05771 Corchorus olitorius HOM05D000151 ORTHO05D000074 6.9e-22 107.5 82 59.8
Gohir.A10G237000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.0e-21 105.9 84 59.5
Gorai.011G286600 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.1e-19 100.1 84 57.1
Gorai.011G286500 Gossypium raimondii HOM05D000151 ORTHO05D000074 2.1e-18 95.9 84 54.8
Gohir.A10G235800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.1e-16 90.1 84 52.4
Gohir.A10G234350 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.3e-15 86.7 67 59.7
QL02p017356 Quercus lobata HOM05D000151 ORTHO05D000074 2.8e-15 85.5 87 47.1
COL.COLO4_24406 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.1e-14 83.6 61 57.4
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 3.1e-14 82.0 82 45.1
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 4.1e-14 81.6 83 47.0
Dinv20253 Davidia involucrata HOM05D000151 ORTHO05D000074 5.3e-14 81.3 83 48.2
Hma1.2p1_0548F.1_g176680 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 9.0e-14 80.5 85 47.1
Oeu030066.1 Olea europaea HOM05D000151 ORTHO05D000074 1.5e-13 79.7 84 44.0
Aqoxy7G03013 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.4e-13 78.6 88 42.0
Dinv20250 Davidia involucrata HOM05D000151 ORTHO05D000074 3.4e-13 78.6 61 57.4
Oeu023255.1 Olea europaea HOM05D000151 ORTHO05D000074 3.4e-13 78.6 84 45.2
Aqoxy7G03016 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.5e-13 78.2 88 42.0
Actinidia06437 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.9e-12 75.5 85 44.7
TAR636G2053 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.9e-12 75.5 83 44.6
MSTRG.25800 Avicennia marina HOM05D000151 ORTHO05D000074 3.8e-12 75.1 84 42.9
TAR636G2429 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.0e-12 74.7 82 45.1
Aqoxy7G03017 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.5e-12 74.3 88 42.0
CSS0023563 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 6.5e-12 74.3 85 42.4
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.5e-12 73.9 84 44.0
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.5e-12 73.9 85 44.7
Cc08_g06170 Coffea canephora HOM05D000151 ORTHO05D000074 1.1e-11 73.6 59 57.6
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-11 73.2 84 45.2
SalBow6G1188 Salvia bowleyana HOM05D000151 ORTHO05D000074 2.5e-11 72.4 104 37.5
MSTRG.6367 Avicennia marina HOM05D000151 ORTHO05D000074 3.2e-11 72.0 106 37.7
Aqoxy7G03805 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.2e-11 71.6 86 38.4
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.2e-11 71.6 61 54.1
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 9.4e-11 70.5 82 41.5
TAR636G2826 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.4e-11 70.5 80 45.0
Dinv43671 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-10 70.1 90 37.8
Cc06_g19480 Coffea canephora HOM05D000151 ORTHO05D000074 1.6e-10 69.7 82 42.7
Dinv01675 Davidia involucrata HOM05D000151 ORTHO05D000074 1.6e-10 69.7 83 41.0
Dinv37469 Davidia involucrata HOM05D000151 ORTHO05D000074 1.6e-10 69.7 90 37.8
Dinv37497 Davidia involucrata HOM05D000151 ORTHO05D000074 1.6e-10 69.7 87 37.9
TAR636G0252 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-10 69.7 61 52.5
TAR636G0632 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-10 69.7 61 52.5
TAR636G3671 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-10 69.7 61 52.5
Aqoxy5G01829 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.1e-10 69.3 91 36.3
Dinv37470 Davidia involucrata HOM05D000151 ORTHO05D000074 2.1e-10 69.3 90 36.7
Dinv37646 Davidia involucrata HOM05D000151 ORTHO05D000074 2.1e-10 69.3 88 36.4
QL04p012604 Quercus lobata HOM05D000151 ORTHO05D000074 2.7e-10 68.9 94 38.3
Solyc08g006180.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.6e-10 68.2 83 38.6
Aqoxy7G03842 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.1e-10 67.8 96 37.5
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 6.1e-10 67.8 82 39.0
TAR362G0800 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.1e-10 67.8 82 42.7
Aqoxy7G02698 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 7.9e-10 67.4 90 38.9
Dinv12037 Davidia involucrata HOM05D000151 ORTHO05D000074 7.9e-10 67.4 82 41.5
QL04p013569 Quercus lobata HOM05D000151 ORTHO05D000074 7.9e-10 67.4 94 37.2
TAR626G1713 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.9e-10 67.4 83 41.0
TAR636G3441 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.9e-10 67.4 89 42.7
Dinv37417 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-09 67.0 92 37.0
Thecc.10G030100 Theobroma cacao HOM05D000151 ORTHO05D000074 1.4e-09 66.6 61 45.9
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-09 66.6 84 39.3
TAR362G0309 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.8e-09 66.2 80 40.0
PGSC0003DMG402009543 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.3e-09 65.9 83 37.3
TAR636G1766 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.3e-09 65.9 89 42.7
Gohir.D10G248775 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.0e-09 65.5 37 67.6
TAR636G1293 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.0e-09 65.5 81 44.4
Thecc.10G029500 Theobroma cacao HOM05D000151 ORTHO05D000074 3.9e-09 65.1 61 42.6
Peaxi162Scf00280g00034 Petunia axillaris HOM05D000151 ORTHO05D000074 6.7e-09 64.3 88 38.6
QL04p009594 Quercus lobata HOM05D000151 ORTHO05D000074 6.7e-09 64.3 97 39.2
Dinv37496 Davidia involucrata HOM05D000151 ORTHO05D000074 8.8e-09 63.9 86 36.0
Gorai.011G289000 Gossypium raimondii HOM05D000151 ORTHO05D000074 8.8e-09 63.9 37 67.6
SalBow6G6217 Salvia bowleyana HOM05D000151 ORTHO05D000074 8.8e-09 63.9 104 35.6
Sopen08g002150 Solanum pennellii HOM05D000151 ORTHO05D000074 8.8e-09 63.9 83 38.6
Actinidia28355 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.1e-08 63.5 84 42.9
Oeu042542.2 Olea europaea HOM05D000151 ORTHO05D000074 1.1e-08 63.5 95 36.8
Rhsim09G0105800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.1e-08 63.5 113 37.2
Lj2g0018976 Lotus japonicus HOM05D008995 ORTHO05D000074 1.5e-08 63.2 91 38.5
TWI31G0931 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.5e-08 63.2 89 41.6
TAR371G0808 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-08 63.2 85 40.0
CSS0034097 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.9e-08 62.8 82 35.4
AUR62009164 Chenopodium quinoa HOM05D000577 ORTHO05D000074 1.9e-08 62.8 92 34.8
Peaxi162Scf00714g00059 Petunia axillaris HOM05D000151 ORTHO05D000074 1.9e-08 62.8 88 37.5
Aqoxy4G02688 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.5e-08 62.4 74 40.5
EL10Ac2g04120 Beta vulgaris HOM05D000151 ORTHO05D000074 3.3e-08 62.0 87 39.1
Peaxi162Scf00045g01536 Petunia axillaris HOM05D000151 ORTHO05D000074 3.3e-08 62.0 81 35.8
TAR636G0534 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.3e-08 62.0 85 37.6
EL10Ac2g04121 Beta vulgaris HOM05D000151 ORTHO05D000074 4.3e-08 61.6 65 43.1
AUR62012295 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.7e-08 61.2 87 36.8
Dinv37418 Davidia involucrata HOM05D000151 ORTHO05D000074 5.7e-08 61.2 65 41.5
Hma1.2p1_0091F.1_g046550 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 5.7e-08 61.2 93 36.6
PGR142G3413 Punica granatum HOM05D000151 ORTHO05D000074 5.7e-08 61.2 61 42.6
Solyc06g068630.4 Solanum lycopersicum HOM05D000151 ORTHO05D000074 5.7e-08 61.2 88 37.5
QL04p009567 Quercus lobata HOM05D000151 ORTHO05D000074 7.4e-08 60.8 95 36.8
QL04p012573 Quercus lobata HOM05D000151 ORTHO05D000074 7.4e-08 60.8 93 36.6
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.4e-08 60.8 83 41.0
Oeu030231.1 Olea europaea HOM05D000151 ORTHO05D000074 9.7e-08 60.5 85 44.7
QL04p013607 Quercus lobata HOM05D000151 ORTHO05D000074 9.7e-08 60.5 92 37.0
COL.COLO4_03636 Corchorus olitorius HOM05D000151 ORTHO05D000074 1.3e-07 60.1 84 36.9
Migut.E01536 Erythranthe guttata HOM05D000151 ORTHO05D000074 1.3e-07 60.1 83 32.5
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 1.3e-07 60.1 88 36.4
QL04p010169 Quercus lobata HOM05D000151 ORTHO05D000074 1.3e-07 60.1 88 36.4
Rhsim02G0223800 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.3e-07 60.1 83 41.0
Rhsim02G0224500 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.3e-07 60.1 85 43.5
TAR626G1895 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.3e-07 60.1 85 41.2
MBI11_g05443_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.7e-07 59.7 86 36.0
QL04p009939 Quercus lobata HOM05D000151 ORTHO05D000074 1.7e-07 59.7 85 36.5
MBI18_g17004_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.2e-07 59.3 83 36.1
Nitab4.5_0000025g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.2e-07 59.3 83 33.7
Oeu042550.1 Olea europaea HOM05D000151 ORTHO05D000074 2.2e-07 59.3 92 38.0
Rhsim02G0225400 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.2e-07 59.3 83 43.4
PGSC0003DMG400043347 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.2e-07 59.3 88 35.2
PGSC0003DMG402028917 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.2e-07 59.3 88 35.2
Rhsim02G0223000 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.8e-07 58.9 86 40.7
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.8e-07 58.9 84 46.4
TWI31G0065 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.8e-07 58.9 91 36.3
TAR633G2489 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-07 58.9 85 41.2
EL10Ac4g08311 Beta vulgaris HOM05D000151 ORTHO05D000074 3.7e-07 58.5 87 36.8
Nitab4.5_0003259g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.7e-07 58.5 83 33.7
QL07p011060 Quercus lobata HOM05D000151 ORTHO05D000074 4.8e-07 58.2 60 41.7
Rhsim02G0224200 Rhododendron simsii HOM05D000151 ORTHO05D000074 4.8e-07 58.2 83 41.0
Rhsim02G0225200 Rhododendron simsii HOM05D000151 ORTHO05D000074 4.8e-07 58.2 83 41.0
EL10Ac2g03973 Beta vulgaris HOM05D000151 ORTHO05D000074 6.3e-07 57.8 86 37.2
Duzib114G0861 Durio zibethinus HOM05D000151 ORTHO05D000074 6.3e-07 57.8 57 40.4
Oeu005193.1 Olea europaea HOM05D000151 ORTHO05D000074 6.3e-07 57.8 85 41.2
Aqoxy7G03491 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.2e-07 57.4 98 34.7
EL10Ac5g12826 Beta vulgaris HOM05D000151 ORTHO05D000074 8.2e-07 57.4 35 57.1
Lj2P400T20 Lonicera japonica HOM05D000151 ORTHO05D000074 8.2e-07 57.4 85 36.5
MBI12_g28746_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 8.2e-07 57.4 88 36.4
QL09p049837 Quercus lobata HOM05D000151 ORTHO05D000074 8.2e-07 57.4 61 41.0
AUR62031500 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.1e-06 57.0 87 35.6
Rhsim02G0223900 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.1e-06 57.0 83 39.8
Lalb_Chr17g0338871 Lupinus albus HOM05D008995 ORTHO05D000074 1.4e-06 56.6 92 37.0
Oeu000663.1 Olea europaea HOM05D000151 ORTHO05D000074 1.4e-06 56.6 96 35.4
Oeu020538.1 Olea europaea HOM05D000151 ORTHO05D000074 1.4e-06 56.6 96 35.4
Rhsim02G0249600 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.4e-06 56.6 90 36.7
Rhsim13G0207700 Rhododendron simsii HOM05D004351 ORTHO05D005196 1.4e-06 56.6 82 34.1
MBI19_g33448_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 1.8e-06 56.2 86 33.7
Rhsim02G0225500 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.8e-06 56.2 83 39.8
Sopen06g025910 Solanum pennellii HOM05D000151 ORTHO05D000074 1.8e-06 56.2 88 35.2
vmacro11301 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 1.8e-06 56.2 115 34.8
MBI18_g45941_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 2.4e-06 55.8 81 35.8
QL04p009931 Quercus lobata HOM05D000151 ORTHO05D000074 2.4e-06 55.8 82 36.6
QL07p011093 Quercus lobata HOM05D000151 ORTHO05D000074 2.4e-06 55.8 61 39.3
VMungo1080G0331 Vigna mungo HOM05D008995 ORTHO05D000074 2.4e-06 55.8 89 37.1
Aqoxy7G04052 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.1e-06 55.5 86 36.0
Hma1.2p1_0311F.1_g121210 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 3.1e-06 55.5 91 36.3
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 3.1e-06 55.5 100 40.0
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.1e-06 55.5 81 35.8
FAN11G1982 Fragaria x ananassa HOM05D008995 ORTHO05D000074 4.1e-06 55.1 88 36.4
Hma1.2p1_0792F.1_g218540 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 5.3e-06 54.7 87 32.2
Rhsim02G0222900 Rhododendron simsii HOM05D000151 ORTHO05D000074 5.3e-06 54.7 96 38.5
Rhsim02G0226200 Rhododendron simsii HOM05D000151 ORTHO05D000074 6.9e-06 54.3 83 38.6


User provided reference genes

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