Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G187400 Theobroma cacao HOM05D000003 ORTHO05D000283 2.9e-78 295.0 136 100.0
CSS0020474 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.1e-19 98.2 117 38.5
CSS0048868 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.1e-19 98.2 117 38.5
FvH4_2g05581 Fragaria vesca HOM05D000003 ORTHO05D000004 9.7e-18 94.0 105 37.1
FvH4_2g05131 Fragaria vesca HOM05D000003 ORTHO05D000006 4.8e-17 91.7 105 35.2
Atru.chr7.223 Acer truncatum HOM05D000003 ORTHO05D000004 6.9e-16 87.8 117 34.2
CSS0043070 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-16 87.8 89 40.4
Atru.chr5.2068 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-15 85.9 100 35.0
Atru.chr8.556 Acer truncatum HOM05D000003 ORTHO05D000004 2.6e-15 85.9 99 41.4
CSS0044337 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.9e-15 84.7 89 39.3
ECA238G3143 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.0e-14 84.0 131 33.6
Atru.chr11.551 Acer truncatum HOM05D000003 ORTHO05D000004 2.2e-14 82.8 99 37.4
Atru.chr5.1984 Acer truncatum HOM05D000003 ORTHO05D000283 2.2e-14 82.8 107 34.6
Atru.chr3.1845 Acer truncatum HOM05D000003 ORTHO05D000283 3.8e-14 82.0 88 36.4
Atru.chr10.517 Acer truncatum HOM05D000003 ORTHO05D000283 5.0e-14 81.6 100 35.0
Atru.chr1.2115 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-13 80.5 87 36.8
CSS0022152 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-13 79.7 89 34.8
Oeu041503.1 Olea europaea HOM05D000003 ORTHO05D000004 5.5e-13 78.2 101 32.7
Aqoxy5G02571 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-12 77.0 89 34.8
Rhsim12G0188500 Rhododendron simsii HOM05D000003 ORTHO05D000283 1.6e-12 76.6 112 35.7
Atru.chr5.1992 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-12 75.5 100 32.0
vmacro16383 Vaccinium macrocarpon HOM05D002734 ORTHO05D003035 4.7e-12 75.1 90 34.4
Atru.chr8.569 Acer truncatum HOM05D000003 ORTHO05D000004 1.0e-11 73.9 70 40.0
ECA232G1097 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-11 73.6 88 39.8
ECA233G1434 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-11 73.6 127 29.9
ECA246G0046 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-11 73.6 92 34.8
Aqoxy5G03631 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.8e-11 73.2 90 38.9
ECA240G0562 Erigeron canadensis HOM05D000014 ORTHO05D000004 3.0e-11 72.4 89 38.2
Aqoxy5G02321 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.1e-11 71.6 88 37.5
ECA238G3214 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.1e-11 71.6 92 37.0
BcaB01g00271 Brassica carinata HOM05D000003 ORTHO05D003342 2.0e-10 69.7 128 29.7
ECA238G3409 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.0e-10 69.7 85 32.9
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 3.3e-10 68.9 119 31.1
ECA236G2077 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-10 68.9 82 37.8
ECA246G2325 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-10 68.9 91 34.1
ECA233G1193 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.4e-10 68.6 88 34.1
ECA234G3773 Erigeron canadensis HOM05D000006 ORTHO05D000004 4.4e-10 68.6 105 36.2
Carub.0006s0619 Capsella rubella HOM05D000003 ORTHO05D000283 5.7e-10 68.2 110 34.5
ECA240G3780 Erigeron canadensis HOM05D000003 ORTHO05D000283 5.7e-10 68.2 92 33.7
Aqoxy1G02900 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.4e-10 67.8 135 31.9
vmacro03128 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 7.4e-10 67.8 102 36.3
HanXRQChr13g0389391 Helianthus annuus HOM05D000003 ORTHO05D000004 9.7e-10 67.4 88 37.5
Thecc.04G196000 Theobroma cacao HOM05D000003 ORTHO05D000004 1.3e-09 67.0 113 31.9
BcaC02g12080 Brassica carinata HOM05D000003 ORTHO05D000006 2.2e-09 66.2 128 25.0
ECA233G5335 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.2e-09 66.2 93 30.1
Aqoxy4G01255 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.8e-09 65.9 88 34.1
BcaC01g04544 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-09 65.9 114 34.2
C09p27360 Brassica napus HOM05D000003 ORTHO05D000283 2.8e-09 65.9 96 38.5
ECA233G1978 Erigeron canadensis HOM05D000006 ORTHO05D000001 2.8e-09 65.9 87 33.3
ECA234G1863 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.8e-09 65.9 120 29.2
ECA232G1148 Erigeron canadensis HOM05D000003 ORTHO05D000476 3.7e-09 65.5 99 34.3
ECA238G4579 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.8e-09 65.1 99 34.3
HanXRQChr08g0236191 Helianthus annuus HOM05D000003 ORTHO05D000004 4.8e-09 65.1 135 28.9
TAR630G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000004 4.8e-09 65.1 99 34.3
AL2G38250 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 8.2e-09 64.3 123 31.7
ECA233G4990 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.2e-09 64.3 93 29.0
Aqoxy3G01611 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.1e-08 63.9 81 34.6
BolC7t41377H Brassica oleracea HOM05D000003 ORTHO05D000283 1.1e-08 63.9 75 37.3
HanXRQChr15g0494971 Helianthus annuus HOM05D000003 ORTHO05D000004 1.1e-08 63.9 116 28.4
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.4e-08 63.5 125 31.2
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.4e-08 63.5 123 33.3
ECA233G2673 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-08 63.5 80 38.8
BolC3t16330H Brassica oleracea HOM05D000003 ORTHO05D000283 1.8e-08 63.2 92 35.9
Carub.0005s2988 Capsella rubella HOM05D000003 ORTHO05D000283 1.8e-08 63.2 110 32.7
ECA234G0523 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.8e-08 63.2 89 36.0
Sabra15G0116600 Salix brachista HOM05D002576 ORTHO05D002696 1.8e-08 63.2 93 35.5
BcaC06g32188 Brassica carinata HOM05D000003 ORTHO05D000283 2.4e-08 62.8 119 26.9
BolC8t47713H Brassica oleracea HOM05D000003 ORTHO05D000283 2.4e-08 62.8 77 37.7
ECA240G0958 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.4e-08 62.8 88 31.8
Atru.chr6.669 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-08 62.4 75 38.7
Atru.chr9.194 Acer truncatum HOM05D000003 ORTHO05D000283 4.1e-08 62.0 79 39.2
BcaB07g32650 Brassica carinata HOM05D000003 ORTHO05D000006 4.1e-08 62.0 118 28.8
Aqoxy1G03382 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 5.3e-08 61.6 99 31.3
ECA233G5613 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.3e-08 61.6 59 44.1
Aqoxy7G02554 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 9.1e-08 60.8 69 33.3
AL6G39210 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 9.1e-08 60.8 84 36.9
Dinv20480 Davidia involucrata HOM05D045668 ORTHO05D000004 1.5e-07 60.1 75 38.7
ECA240G3336 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.5e-07 60.1 88 28.4
AT1G43730 Arabidopsis thaliana HOM05D000003 ORTHO05D000283 2.0e-07 59.7 98 35.7
Carub.0003s2082 Capsella rubella HOM05D000003 ORTHO05D000283 2.0e-07 59.7 71 36.6
PSO591G0325 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-07 59.7 66 37.9
ECA233G5384 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.6e-07 59.3 88 28.4
TAR214G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000283 2.6e-07 59.3 89 38.2
ECA233G6160 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.4e-07 58.9 84 32.1
ECA240G1032 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.4e-07 58.9 81 37.0
BcaC04g19549 Brassica carinata HOM05D000003 ORTHO05D000283 4.5e-07 58.5 119 27.7
HanXRQChr17g0558651 Helianthus annuus HOM05D000003 ORTHO05D000004 4.5e-07 58.5 94 28.7
BraA05t21021Z Brassica rapa HOM05D000003 ORTHO05D000283 7.7e-07 57.8 136 29.4
A04p02300 Brassica napus HOM05D000003 ORTHO05D000283 1.0e-06 57.4 84 35.7
BolC2t06931H Brassica oleracea HOM05D000003 ORTHO05D000283 1.0e-06 57.4 73 35.6
BraA03t15305Z Brassica rapa HOM05D000003 ORTHO05D000283 1.0e-06 57.4 122 28.7
AL2G24450 Arabidopsis lyrata HOM05D024632 ORTHO05D031429 1.3e-06 57.0 60 40.0
PSO170G2387 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-06 57.0 107 29.0
BraA02t06658Z Brassica rapa HOM05D000003 ORTHO05D000283 1.7e-06 56.6 107 29.9
PSO210G3380 Papaver somniferum HOM05D000003 ORTHO05D000283 1.7e-06 56.6 61 32.8
PSO541G4973 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-06 56.6 99 26.3
THA.LOC104810684 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.7e-06 56.6 112 28.6
PSO675G8083 Papaver somniferum HOM05D000003 ORTHO05D000004 2.2e-06 56.2 58 36.2
Aqoxy6G02276 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.9e-06 55.8 51 39.2
ECA232G2797 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.9e-06 55.8 119 25.2
Atru.chr8.560 Acer truncatum HOM05D000003 ORTHO05D000283 3.8e-06 55.5 67 35.8
Aa31LG9G4310 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.8e-06 55.5 107 30.8
Atru.chr6.660 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 54.7 69 34.8
Aqoxy1G03910 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.5e-06 54.7 104 26.9
BolC5t32965H Brassica oleracea HOM05D000003 ORTHO05D000283 6.5e-06 54.7 81 38.3
BolC8t50217H Brassica oleracea HOM05D000003 ORTHO05D000283 6.5e-06 54.7 55 40.0
Aqoxy1G02054 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 8.5e-06 54.3 50 38.0
BolC1t00132H Brassica oleracea HOM05D000003 ORTHO05D000283 8.5e-06 54.3 107 29.9
BolC3t17175H Brassica oleracea HOM05D000003 ORTHO05D000283 8.5e-06 54.3 80 33.8
BraA03t10087Z Brassica rapa HOM05D000003 ORTHO05D000283 8.5e-06 54.3 94 30.9
BraA06t24780Z Brassica rapa HOM05D000003 ORTHO05D000283 8.5e-06 54.3 58 41.4


User provided reference genes

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