Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G182100 Theobroma cacao HOM05D004109 ORTHO05D005867 4.8e-277 957.2 489 100.0
Duzib160G0240 Durio zibethinus HOM05D004109 ORTHO05D005867 3.7e-237 824.7 449 92.0
COL.COLO4_13719 Corchorus olitorius HOM05D004109 ORTHO05D005867 5.4e-236 820.8 449 91.8
Gohir.D13G129300 Gossypium hirsutum HOM05D004109 ORTHO05D005867 2.3e-234 815.5 468 88.7
Gohir.A13G125500 Gossypium hirsutum HOM05D004109 ORTHO05D005867 8.6e-234 813.5 468 88.5
Gorai.013G145300 Gossypium raimondii HOM05D004109 ORTHO05D005867 2.1e-232 808.9 465 88.2
Duzib192G0069 Durio zibethinus HOM05D004109 ORTHO05D005867 3.4e-230 801.6 439 92.3
Potri.001G465300 Populus trichocarpa HOM05D004109 ORTHO05D005867 2.9e-221 771.9 441 88.2
Prupe.4G091700 Prunus persica HOM05D004109 ORTHO05D005867 2.9e-221 771.9 449 86.2
Ciclev10015058m.g Citrus clementina HOM05D004109 ORTHO05D005867 1.1e-220 770.0 449 86.0
FvH4_3g10270 Fragaria vesca HOM05D004109 ORTHO05D005867 1.1e-220 770.0 449 85.7
Cpa.g.sc139.36 Carica papaya HOM05D004109 ORTHO05D005867 1.4e-220 769.6 478 82.6
Potri.011G163400 Populus trichocarpa HOM05D004109 ORTHO05D005867 1.4e-220 769.6 450 86.4
MD10G1251700 Malus domestica HOM05D004109 ORTHO05D005867 3.2e-220 768.5 442 87.1
PGR083G1643 Punica granatum HOM05D004109 ORTHO05D005867 1.6e-219 766.1 484 81.6
Sabra11G0141200 Salix brachista HOM05D004109 ORTHO05D005867 2.7e-219 765.4 447 86.1
EL10Ac1g00099 Beta vulgaris HOM05D004109 ORTHO05D005867 2.3e-218 762.3 443 86.0
Ah.05g178270 Amaranthus hybridus HOM05D004109 ORTHO05D005867 8.6e-218 760.4 449 84.9
GSVIVG01001692001 Vitis vinifera HOM05D004109 ORTHO05D005867 8.6e-218 760.4 454 84.6
Atru.chr12.891 Acer truncatum HOM05D004109 ORTHO05D005867 1.5e-217 759.6 439 87.0
MD05G1271100 Malus domestica HOM05D004109 ORTHO05D005867 1.9e-217 759.2 432 88.4
Cfa002071 Carpinus fangiana HOM05D004109 ORTHO05D005867 2.5e-217 758.8 453 84.3
Manes.06G058300 Manihot esculenta HOM05D004109 ORTHO05D005867 2.5e-217 758.8 432 88.0
THA.LOC104799477 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 2.8e-216 755.4 446 84.8
BcaNung04636 Brassica carinata HOM05D004109 ORTHO05D005867 4.7e-216 754.6 443 84.4
Hund27096 Selenicereus undatus HOM05D004109 ORTHO05D005867 4.7e-216 754.6 449 84.2
CANSAT01G0468 Cannabis sativa HOM05D004109 ORTHO05D005867 6.2e-216 754.2 445 83.8
Eucgr.D00111 Eucalyptus grandis HOM05D004109 ORTHO05D005867 6.2e-216 754.2 442 84.6
AUR62000071 Chenopodium quinoa HOM05D004109 ORTHO05D005867 8.1e-216 753.8 472 80.5
BraA09t36495Z Brassica rapa HOM05D004109 ORTHO05D005867 1.1e-215 753.4 443 84.4
A09p08450 Brassica napus HOM05D004109 ORTHO05D005867 1.4e-215 753.1 443 84.4
THA.LOC104810828 Tarenaya hassleriana HOM05D004109 ORTHO05D005867 1.4e-215 753.1 449 84.2
BcaC04g23349 Brassica carinata HOM05D004109 ORTHO05D005867 5.2e-215 751.1 449 83.7
BolC9t53868H Brassica oleracea HOM05D004109 ORTHO05D005867 5.2e-215 751.1 449 83.7
RcHm_v2.0_Chr5g0016531 Rosa chinensis HOM05D004109 ORTHO05D005867 1.2e-214 750.0 439 85.4
ClCG03G008220 Citrullus lanatus HOM05D004109 ORTHO05D005867 1.5e-214 749.6 449 84.6
Aa31LG1G12300 Aethionema arabicum HOM05D004109 ORTHO05D005867 2.6e-214 748.8 437 84.9
MELO3C002828.2 Cucumis melo HOM05D004109 ORTHO05D005867 2.6e-214 748.8 449 84.2
Thhalv10004035m.g Eutrema salsugineum HOM05D004109 ORTHO05D005867 2.6e-214 748.8 443 83.7
CARHR277790 Cardamine hirsuta HOM05D004109 ORTHO05D005867 3.4e-214 748.4 443 84.0
Sed0019466 Sechium edule HOM05D004109 ORTHO05D005867 3.4e-214 748.4 449 84.2
CiPaw.09G142500 Carya illinoinensis HOM05D004109 ORTHO05D005867 4.4e-214 748.0 449 83.5
C03p62550 Brassica napus HOM05D004109 ORTHO05D005867 5.8e-214 747.7 446 83.6
BolC3t18512H Brassica oleracea HOM05D004109 ORTHO05D005867 5.8e-214 747.7 446 83.6
CsaV3_1G037190 Cucumis sativus L. HOM05D004109 ORTHO05D005867 5.8e-214 747.7 449 84.4
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 5.8e-214 747.7 439 84.5
Sp2g26950 Schrenkiella parvula HOM05D004109 ORTHO05D005867 9.9e-214 746.9 436 85.1
BcaB02g09768 Brassica carinata HOM05D004109 ORTHO05D005867 1.3e-213 746.5 440 84.3
C09p09570 Brassica napus HOM05D004109 ORTHO05D005867 1.3e-213 746.5 449 83.3
Solyc02g071890.3 Solanum lycopersicum HOM05D004109 ORTHO05D005867 1.3e-213 746.5 449 83.5
BraA06t26000Z Brassica rapa HOM05D004109 ORTHO05D005867 1.7e-213 746.1 440 83.6
A06p30510 Brassica napus HOM05D004109 ORTHO05D005867 2.2e-213 745.7 440 83.6
Hma1.2p1_0892F.1_g233350 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 2.2e-213 745.7 443 84.9
CSS0030683 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.9e-213 745.3 435 86.4
Carub.0008s2466 Capsella rubella HOM05D004109 ORTHO05D005867 2.9e-213 745.3 443 84.0
TAR369G0339 Trochodendron aralioides HOM05D004109 ORTHO05D005867 2.9e-213 745.3 442 84.2
Lj7A233T12 Lonicera japonica HOM05D004109 ORTHO05D005867 4.9e-213 744.6 441 84.6
ECA238G2995 Erigeron canadensis HOM05D004109 ORTHO05D005867 6.4e-213 744.2 434 85.3
BcaC01g02640 Brassica carinata HOM05D004109 ORTHO05D005867 8.4e-213 743.8 440 83.6
Rhsim07G0074000 Rhododendron simsii HOM05D004109 ORTHO05D005867 8.4e-213 743.8 439 84.5
AL8G41120 Arabidopsis lyrata HOM05D004109 ORTHO05D005867 1.4e-212 743.0 443 83.1
HanXRQChr07g0201181 Helianthus annuus HOM05D004109 ORTHO05D005867 1.4e-212 743.0 438 84.0
Nn7g37134 Nelumbo nucifera HOM05D004109 ORTHO05D005867 3.2e-212 741.9 442 84.2
FAN11G0285 Fragaria x ananassa HOM05D001785 ORTHO05D001933 5.4e-212 741.1 483 79.7
Nitab4.5_0001778g0190 Nicotiana tabacum HOM05D004109 ORTHO05D005867 9.3e-212 740.3 449 82.6
MSTRG.20474 Avicennia marina HOM05D004109 ORTHO05D005867 1.6e-211 739.6 441 83.7
Glyma.09G025600 Glycine max HOM05D004109 ORTHO05D005867 1.6e-211 739.6 439 83.8
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 3.5e-211 738.4 439 84.5
Sed0002561 Sechium edule HOM05D004109 ORTHO05D005867 4.6e-211 738.0 449 83.1
AT5G63890 Arabidopsis thaliana HOM05D004109 ORTHO05D005867 6.0e-211 737.6 466 80.0
Nitab4.5_0001793g0060 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.0e-210 736.9 449 82.0
CAN.G411.27 Capsicum annuum HOM05D004109 ORTHO05D005867 1.7e-210 736.1 449 82.4
Sopen02g020880 Solanum pennellii HOM05D004109 ORTHO05D005867 2.3e-210 735.7 439 84.3
Migut.B01142 Erythranthe guttata HOM05D004109 ORTHO05D005867 3.9e-210 734.9 450 82.2
Glyma.15G131700 Glycine max HOM05D004109 ORTHO05D005867 5.1e-210 734.6 439 83.1
QL08p023474 Quercus lobata HOM05D004109 ORTHO05D005867 5.1e-210 734.6 448 83.5
Cc02_g32120 Coffea canephora HOM05D004109 ORTHO05D005867 6.6e-210 734.2 443 81.7
MBI02_g14218_MAGBIO Magnolia biondii HOM05D004109 ORTHO05D005867 3.3e-209 731.9 435 83.7
Lj6g0008240 Lotus japonicus HOM05D004109 ORTHO05D005867 4.3e-209 731.5 441 83.0
Sabra16G0315800 Salix brachista HOM05D004109 ORTHO05D005867 5.6e-209 731.1 452 83.0
PSO675G4088 Papaver somniferum HOM05D004109 ORTHO05D005867 2.8e-208 728.8 436 82.6
Cfa005415 Carpinus fangiana HOM05D004109 ORTHO05D005867 3.6e-208 728.4 449 82.0
Phvul.006G126900 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 6.2e-208 727.6 439 82.5
SGA_v2.0_scaffold114G32023 Striga asiatica HOM05D004109 ORTHO05D005867 1.8e-207 726.1 438 82.6
PSO675G5109 Papaver somniferum HOM05D004109 ORTHO05D005867 2.4e-207 725.7 436 82.3
TWI63G1440 Tripterygium wilfordii HOM05D004109 ORTHO05D005867 4.0e-207 724.9 449 82.4
Ca_00854_v3 Cicer arietinum L. HOM05D004109 ORTHO05D005867 5.3e-207 724.5 435 83.9
Nitab4.5_0008572g0030 Nicotiana tabacum HOM05D004109 ORTHO05D005867 1.2e-206 723.4 432 83.3
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.5e-206 723.0 439 83.4
HPP92_000958 Vanilla planifolia HOM05D004109 ORTHO05D005867 1.5e-206 723.0 435 81.8
Aqoxy7G00406 Aquilegia oxysepala HOM05D004109 ORTHO05D005867 2.6e-206 722.2 473 78.6
DCAR_003019 Daucus carota HOM05D004109 ORTHO05D005867 2.6e-206 722.2 445 80.0
Os01g0232700 Oryza sativa ssp. japonica HOM05D004109 ORTHO05D005867 7.6e-206 720.7 432 83.1
Psat1g166680 Pisum sativum HOM05D004109 ORTHO05D005867 9.9e-206 720.3 436 83.0
arahy.Tifrunner.gnm1.ann1.S2DTMZ Arachis hypogaea HOM05D004109 ORTHO05D005867 1.7e-205 719.5 432 81.9
Lalb_Chr20g0120131 Lupinus albus HOM05D004109 ORTHO05D005867 4.9e-205 718.0 439 81.5
arahy.Tifrunner.gnm1.ann1.E4EMQ7 Arachis hypogaea HOM05D004109 ORTHO05D005867 6.4e-205 717.6 444 81.3
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 8.4e-205 717.2 432 81.7
FAN21G0038 Fragaria x ananassa HOM05D001785 ORTHO05D001933 1.1e-204 716.8 442 81.9
Medtr2g030520 Medicago truncatula HOM05D004109 ORTHO05D005867 3.2e-204 715.3 435 82.1
RcHm_v2.0_Chr7g0241131 Rosa chinensis HOM05D004109 ORTHO05D005867 5.4e-204 714.5 449 81.1
Lj4g0018356 Lotus japonicus HOM05D004109 ORTHO05D005867 2.1e-203 712.6 435 81.6
FAN25G1737 Fragaria x ananassa HOM05D001785 ORTHO05D001933 4.6e-203 711.4 442 81.4
Glyma.08G081500 Glycine max HOM05D004109 ORTHO05D005867 7.9e-203 710.7 436 80.7
CDE06G2252 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 2.3e-202 709.1 430 80.7
vmacro13807 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 2.3e-202 709.1 428 82.9
Phvul.002G198300 Phaseolus vulgaris HOM05D004109 ORTHO05D005867 1.1e-201 706.8 436 80.5
FAN16G0137 Fragaria x ananassa HOM05D001785 ORTHO05D001933 3.3e-201 705.3 442 80.8
arahy.Tifrunner.gnm1.ann1.X3TBAN Arachis hypogaea HOM05D004109 ORTHO05D005867 4.3e-201 704.9 470 77.0
VMungo0540G0358 Vigna mungo HOM05D004109 ORTHO05D005867 4.0e-199 698.4 448 79.0
ATR0810G187 Amborella trichopoda HOM05D004109 ORTHO05D005867 6.9e-199 697.6 431 79.6
Sc26g0000620 Simmondsia chinensis HOM05D004109 ORTHO05D005867 3.4e-198 695.3 413 83.5
unitig_0.g2208 Utricularia gibba HOM05D004109 ORTHO05D005867 1.7e-197 693.0 431 79.6
SEGI_09299 Sequoiadendron giganteum HOM05D004109 ORTHO05D005867 3.8e-197 691.8 439 77.7
CDE03G0162 Ceratophyllum demersum HOM05D004109 ORTHO05D005867 4.9e-197 691.4 436 78.2
BcaNung04631 Brassica carinata HOM05D004109 ORTHO05D005867 2.0e-190 669.5 439 77.9
Nitab4.5_0003703g0080 Nicotiana tabacum HOM05D004109 ORTHO05D005867 5.1e-186 654.8 386 84.2
Pp3c25_2460 Physcomitrium patens HOM05D004109 ORTHO05D005867 3.4e-182 642.1 432 72.7
Mapoly0060s0093 Marchantia polymorpha HOM05D004109 ORTHO05D005867 4.5e-182 641.7 437 73.0
SMO137G0061 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 2.1e-179 632.9 427 74.5
Pp3c16_4820 Physcomitrium patens HOM05D004109 ORTHO05D005867 1.8e-178 629.8 432 72.5
AagrBONN_evm.TU.Sc2ySwM_228.1565 Anthoceros agrestis HOM05D004109 ORTHO05D005867 2.5e-177 625.9 470 68.5
CBR_g8928 Chara braunii HOM05D004109 ORTHO05D005867 1.9e-172 609.8 434 69.8
AUR62019245 Chenopodium quinoa HOM05D004109 ORTHO05D005867 1.0e-170 604.0 357 83.8
Cre02.g077350 Chlamydomonas reinhardtii HOM05D004109 ORTHO05D005867 3.0e-170 602.4 426 70.7
PRCOL_00002586 Prasinoderma coloniale HOM05D004109 ORTHO05D005867 6.3e-168 594.7 439 69.2
vmacro23219 Vaccinium macrocarpon HOM05D004109 ORTHO05D005867 4.1e-159 565.5 501 63.5
MCO06G190 Micromonas commoda HOM05D004109 ORTHO05D005867 4.5e-158 562.0 428 67.5
CSS0014434 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 2.7e-150 536.2 318 85.8
Dinv23908 Davidia involucrata HOM05D004109 ORTHO05D005867 4.5e-150 535.4 315 85.4
Cfa023091 Carpinus fangiana HOM05D004109 ORTHO05D005867 1.3e-120 437.6 438 52.7
Haze_16420 Corylus avellana HOM05D004109 ORTHO05D005867 3.7e-120 436.0 279 79.9
SMO170G0053 Selaginella moellendorffii HOM05D004109 ORTHO05D005867 3.0e-117 426.4 330 68.2
Zm00001eb059830 Zea mays HOM05D004109 ORTHO05D005867 1.2e-115 421.0 258 81.4
TPR.G26361 Trifolium pratense HOM05D004109 ORTHO05D005867 3.4e-113 412.9 257 80.9
Peaxi162Scf00112g01722 Petunia axillaris HOM05D004109 ORTHO05D005867 1.6e-110 404.1 232 85.3
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 2.7e-110 403.3 289 71.6
Migut.B01141 Erythranthe guttata HOM05D004109 ORTHO05D005867 2.9e-88 330.1 405 51.4
Peaxi162Scf00112g01719 Petunia axillaris HOM05D004109 ORTHO05D005867 1.1e-87 328.2 244 72.1
Haze_01914 Corylus avellana HOM05D004109 ORTHO05D005867 1.6e-86 324.3 182 87.9
Actinidia34688 Actinidia chinensis HOM05D004109 ORTHO05D005867 1.7e-85 320.9 201 80.6
VMungo0251G3018 Vigna mungo HOM05D004109 ORTHO05D005867 4.0e-82 309.7 178 84.8
Haze_01911 Corylus avellana HOM05D004109 ORTHO05D001172 6.2e-75 285.8 228 67.1
PSO675G6350 Papaver somniferum HOM05D004109 ORTHO05D005867 1.7e-72 277.7 182 75.8
Haze_27135 Corylus avellana HOM05D004109 ORTHO05D005867 2.5e-68 263.8 417 40.0
BolC8t51924H Brassica oleracea HOM05D004109 ORTHO05D005867 2.4e-66 257.3 218 62.8
C01p45280 Brassica napus HOM05D004109 ORTHO05D005867 3.1e-66 256.9 223 62.8
C03p60030 Brassica napus HOM05D004109 ORTHO05D005867 3.8e-64 250.0 216 62.0
Lsat_1_v5_gn_0_46200 Lactuca sativa HOM05D004109 ORTHO05D005867 1.9e-63 247.7 290 47.2
BolC3t15408H Brassica oleracea HOM05D004109 ORTHO05D005867 1.2e-62 245.0 220 60.5
BcaC01g02810 Brassica carinata HOM05D004109 ORTHO05D005867 4.1e-58 229.9 214 57.9
TPR.G39866 Trifolium pratense HOM05D004109 ORTHO05D005867 5.5e-55 219.5 124 84.7
CSS0037475 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 4.1e-50 203.4 115 87.0
SMO137G0105 Selaginella moellendorffii HOM05D004109 ORTHO05D019780 7.4e-44 182.6 189 56.1
CSS0025757 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 5.5e-39 166.4 95 85.3
PGSC0003DMG400028409 Solanum tuberosum HOM05D004109 ORTHO05D005867 1.2e-36 158.7 87 87.4
vmacro20533 Vaccinium macrocarpon HOM05D004109 ORTHO05D000800 2.5e-31 141.0 158 51.3
Lsat_1_v5_gn_0_43980 Lactuca sativa HOM05D004109 ORTHO05D005867 7.7e-25 119.4 128 44.5
vmacro20532 Vaccinium macrocarpon HOM05D004109 ORTHO05D426529 5.0e-24 116.7 152 47.4
BcaC09g48845 Brassica carinata HOM05D004109 ORTHO05D009034 9.5e-23 112.5 212 39.6
HanXRQChr17g0545961 Helianthus annuus HOM05D004109 ORTHO05D225632 1.6e-22 111.7 111 56.8
Lsat_1_v5_gn_2_130860 Lactuca sativa HOM05D004109 ORTHO05D019780 6.1e-22 109.8 67 82.1
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 3.0e-21 107.5 125 52.0
vmacro20529 Vaccinium macrocarpon HOM05D004109 ORTHO05D427059 7.8e-17 92.8 74 63.5
Hma1.2p1_0258F.1_g104030 Hydrangea macrophylla HOM05D004109 ORTHO05D005867 1.0e-16 92.4 64 73.4
PSO063G0645 Papaver somniferum HOM05D004109 ORTHO05D019780 3.8e-16 90.5 57 78.9
AagrBONN_evm.TU.Sc2ySwM_117.3019 Anthoceros agrestis HOM05D000719 ORTHO05D000569 1.1e-15 89.0 66 69.7
BolC3t18268H Brassica oleracea HOM05D004109 ORTHO05D005867 6.8e-13 79.7 44 88.6
arahy.Tifrunner.gnm1.ann1.P7LCDJ Arachis hypogaea HOM05D004109 ORTHO05D019780 2.6e-12 77.8 48 81.2
arahy.Tifrunner.gnm1.ann1.V2D64V Arachis hypogaea HOM05D004109 ORTHO05D019780 1.7e-11 75.1 69 62.3
Actinidia02690 Actinidia chinensis HOM05D004109 ORTHO05D054316 2.9e-11 74.3 48 77.1
BolC3t18267H Brassica oleracea HOM05D004109 ORTHO05D019780 4.9e-11 73.6 46 78.3
Glyma.20G022700 Glycine max HOM05D004109 ORTHO05D019780 1.6e-09 68.6 37 91.9
vmacro09568 Vaccinium macrocarpon HOM05D004109 ORTHO05D003511 1.0e-08 65.9 69 58.0
Zm00001eb213480 Zea mays HOM05D002921 ORTHO05D003258 7.3e-07 59.7 84 50.0
SMO137G0306 Selaginella moellendorffii HOM05D004109 ORTHO05D377039 1.2e-06 58.9 31 83.9
vmacro07499 Vaccinium macrocarpon HOM05D004109 ORTHO05D426741 2.8e-06 57.8 51 62.7


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