Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G178900 Theobroma cacao HOM05D012883 ORTHO05D011203 8.4e-44 179.9 85 100.0
Gohir.A05G402700 Gossypium hirsutum HOM05D012883 ORTHO05D011203 5.3e-14 80.9 71 63.4
Gohir.D04G012800 Gossypium hirsutum HOM05D012883 ORTHO05D011203 5.3e-14 80.9 71 63.4
Gorai.012G015100 Gossypium raimondii HOM05D012883 ORTHO05D011203 5.3e-14 80.9 71 63.4
RcHm_v2.0_Chr1g0372361 Rosa chinensis HOM05D012883 ORTHO05D011203 4.2e-11 71.2 67 50.7
Glyma.04G223100 Glycine max HOM05D010279 ORTHO05D011203 9.4e-11 70.1 57 50.9
Nn5g26841 Nelumbo nucifera HOM05D010279 ORTHO05D011203 1.6e-10 69.3 43 74.4
Potri.019G059000 Populus trichocarpa HOM05D010279 ORTHO05D011203 4.6e-10 67.8 69 47.8
CSS0000028 Camellia sinensis var. sinensis HOM05D010279 ORTHO05D011203 1.4e-09 66.2 51 60.8
MBI03_g11401_MAGBIO Magnolia biondii HOM05D010279 ORTHO05D011203 1.8e-09 65.9 52 55.8
FAN03G0458 Fragaria x ananassa HOM05D012883 ORTHO05D011203 3.0e-09 65.1 54 53.7
Eucgr.G03142 Eucalyptus grandis HOM05D010279 ORTHO05D011203 3.9e-09 64.7 79 45.6
Glyma.06G142200 Glycine max HOM05D010279 ORTHO05D011203 6.7e-09 63.9 48 54.2
Phvul.009G043300 Phaseolus vulgaris HOM05D010279 ORTHO05D011203 2.5e-08 62.0 46 54.3
Zm00001eb285070 Zea mays HOM05D012883 ORTHO05D011203 2.5e-08 62.0 45 55.6
Lalb_Chr08g0239211 Lupinus albus HOM05D010279 ORTHO05D011203 4.3e-08 61.2 60 48.3
Os05g0323400 Oryza sativa ssp. japonica HOM05D010279 ORTHO05D011203 5.7e-08 60.8 41 61.0
Psat5g068480 Pisum sativum HOM05D010279 ORTHO05D011203 7.4e-08 60.5 50 50.0
Potri.006G108901 Populus trichocarpa HOM05D010279 ORTHO05D011203 1.7e-07 59.3 37 59.5
Thecc.04G151000 Theobroma cacao HOM05D010279 ORTHO05D011203 1.1e-06 56.6 42 57.1
Prupe.6G294500 Prunus persica HOM05D012883 ORTHO05D011203 1.8e-06 55.8 44 59.1
Lalb_Chr11g0067761 Lupinus albus HOM05D010279 ORTHO05D011203 2.4e-06 55.5 49 46.9
FAN06G0801 Fragaria x ananassa HOM05D012883 ORTHO05D011203 3.1e-06 55.1 30 66.7
Haze_21180 Corylus avellana HOM05D000969 ORTHO05D000899 4.1e-06 54.7 43 55.8
PGSC0003DMG400016663 Solanum tuberosum HOM05D010279 ORTHO05D011203 9.1e-06 53.5 60 53.3


User provided reference genes

Program Settings