Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G173600 Theobroma cacao HOM05D009452 ORTHO05D010466 7.1e-109 397.5 236 100.0
Duzib128G1431 Durio zibethinus HOM05D009452 ORTHO05D010466 4.4e-66 255.4 237 62.9
Duzib106G0033 Durio zibethinus HOM05D009452 ORTHO05D010466 1.8e-64 250.0 228 71.5
Gohir.A05G280100 Gossypium hirsutum HOM05D009452 ORTHO05D010466 1.3e-49 200.7 226 56.2
Gorai.009G295300 Gossypium raimondii HOM05D009452 ORTHO05D010466 3.7e-41 172.6 226 52.7
Gohir.D05G281900 Gossypium hirsutum HOM05D009452 ORTHO05D010466 8.3e-41 171.4 226 51.3
Gohir.D05G317251 Gossypium hirsutum HOM05D009452 ORTHO05D010466 4.4e-34 149.1 217 44.2
Duzib114G0872 Durio zibethinus HOM05D009452 ORTHO05D010466 9.5e-21 104.8 84 64.3
Manes.07G138900 Manihot esculenta HOM05D009452 ORTHO05D010466 1.2e-20 104.4 121 51.2
Prupe.2G260200 Prunus persica HOM05D015621 ORTHO05D015549 1.1e-19 101.3 123 49.6
TWI53G1543 Tripterygium wilfordii HOM05D009452 ORTHO05D010466 8.9e-19 98.2 221 43.4
GSVIVG01032717001 Vitis vinifera HOM05D009452 ORTHO05D010466 2.6e-18 96.7 226 38.1
Cfa001234 Carpinus fangiana HOM05D009452 ORTHO05D010466 2.9e-17 93.2 108 50.0
COL.COLO4_38187 Corchorus olitorius HOM05D009452 ORTHO05D010466 2.9e-17 93.2 217 39.6
QL08p064335 Quercus lobata HOM05D009452 ORTHO05D015549 1.6e-15 87.4 129 43.4
Cpa.g.sc19.95 Carica papaya HOM05D010126 ORTHO05D010466 2.7e-15 86.7 265 35.1
Potri.019G055900 Populus trichocarpa HOM05D009452 ORTHO05D010466 1.0e-14 84.7 124 46.8
Thecc.10G174000 Theobroma cacao HOM05D009452 ORTHO05D010466 2.3e-14 83.6 52 82.7
Haze_17329 Corylus avellana HOM05D009452 ORTHO05D010466 3.0e-14 83.2 243 33.7
CiPaw.02G197600 Carya illinoinensis HOM05D009452 ORTHO05D015549 4.3e-13 79.3 120 43.3
Ciclev10033088m.g Citrus clementina HOM05D009452 ORTHO05D010466 4.3e-13 79.3 110 44.5
MBI15_g33037_MAGBIO Magnolia biondii HOM05D009452 ORTHO05D010466 5.6e-13 79.0 129 39.5
Nn2g11084 Nelumbo nucifera HOM05D025597 ORTHO05D010466 9.5e-13 78.2 131 40.5
PGR142G1927 Punica granatum HOM05D009452 ORTHO05D010466 9.5e-13 78.2 121 44.6
TWI73G1136 Tripterygium wilfordii HOM05D009452 ORTHO05D010466 9.5e-13 78.2 249 32.1
MD07G1230300 Malus domestica HOM05D015621 ORTHO05D015549 4.7e-12 75.9 131 38.2
arahy.Tifrunner.gnm1.ann1.HU7Z0W Arachis hypogaea HOM05D010487 ORTHO05D011788 1.4e-11 74.3 223 31.8
arahy.Tifrunner.gnm1.ann1.MU8G5E Arachis hypogaea HOM05D010487 ORTHO05D011788 1.2e-10 71.2 226 31.9
Atru.chr12.144 Acer truncatum HOM05D060625 ORTHO05D010466 2.0e-10 70.5 106 41.5
arahy.Tifrunner.gnm1.ann1.SXB28M Arachis hypogaea HOM05D010487 ORTHO05D011788 2.0e-10 70.5 231 33.3
Glyma.14G053800 Glycine max HOM05D010487 ORTHO05D011788 2.0e-10 70.5 131 39.7
VMungo0647G0931 Vigna mungo HOM05D010487 ORTHO05D011788 2.6e-10 70.1 131 38.9
Potri.013G083700 Populus trichocarpa HOM05D009452 ORTHO05D010466 3.4e-10 69.7 227 34.4
Eucgr.G03118 Eucalyptus grandis HOM05D009452 ORTHO05D010466 5.8e-10 68.9 131 38.9
CsaV3_6G002160 Cucumis sativus L. HOM05D022193 ORTHO05D010466 1.3e-09 67.8 118 41.5
CANSAT56G1042 Cannabis sativa HOM05D015621 ORTHO05D015549 1.7e-09 67.4 127 37.8
FAN03G1751 Fragaria x ananassa HOM05D015621 ORTHO05D015549 3.7e-09 66.2 131 38.9
arahy.Tifrunner.gnm1.ann1.LNGA9N Arachis hypogaea HOM05D010487 ORTHO05D011788 1.4e-08 64.3 113 39.8
FvH4_7g25540 Fragaria vesca HOM05D015621 ORTHO05D015549 1.9e-08 63.9 131 38.2
FAN06G2805 Fragaria x ananassa HOM05D015621 ORTHO05D015549 1.9e-08 63.9 131 38.2
MD01G1162300 Malus domestica HOM05D015621 ORTHO05D015549 1.9e-08 63.9 115 38.3
Phvul.008G218600 Phaseolus vulgaris HOM05D010487 ORTHO05D011788 1.9e-08 63.9 110 40.9
FAN01G0195 Fragaria x ananassa HOM05D015621 ORTHO05D015549 2.4e-08 63.5 131 38.2
AUR62022982 Chenopodium quinoa HOM05D017273 ORTHO05D019523 3.2e-08 63.2 124 37.9
BcaB01g00010 Brassica carinata HOM05D010126 ORTHO05D010466 5.4e-08 62.4 118 37.3
THA.LOC104824352 Tarenaya hassleriana HOM05D010126 ORTHO05D010466 5.4e-08 62.4 230 32.6
CSS0035018 Camellia sinensis var. sinensis HOM05D016735 ORTHO05D012140 9.2e-08 61.6 65 52.3
PGR044G2337 Punica granatum HOM05D009452 ORTHO05D010466 1.6e-07 60.8 93 43.0
RcHm_v2.0_Chr1g0371541 Rosa chinensis HOM05D015621 ORTHO05D015549 1.6e-07 60.8 131 35.1
Sc11g0005670 Simmondsia chinensis HOM05D017273 ORTHO05D019523 1.6e-07 60.8 130 36.2
Thhalv10006172m.g Eutrema salsugineum HOM05D010126 ORTHO05D010466 2.7e-07 60.1 119 37.8
Sed0024289 Sechium edule HOM05D022193 ORTHO05D010466 2.7e-07 60.1 229 33.2
Lalb_Chr17g0347061 Lupinus albus HOM05D010487 ORTHO05D011788 3.5e-07 59.7 246 30.1
Sed0025520 Sechium edule HOM05D022193 ORTHO05D010466 3.5e-07 59.7 223 37.2
MELO3C019993.2 Cucumis melo HOM05D022193 ORTHO05D010466 4.6e-07 59.3 146 36.3
AUR62012338 Chenopodium quinoa HOM05D017273 ORTHO05D019523 6.0e-07 58.9 121 36.4
vmacro09981 Vaccinium macrocarpon HOM05D016735 ORTHO05D012140 6.0e-07 58.9 286 26.9
BcaC07g39942 Brassica carinata HOM05D010126 ORTHO05D010466 7.8e-07 58.5 238 27.7
A07p22860 Brassica napus HOM05D010126 ORTHO05D010466 7.8e-07 58.5 119 37.8
Ah.16g104130 Amaranthus hybridus HOM05D017273 ORTHO05D019523 1.0e-06 58.2 123 35.8
Sp5g06250 Schrenkiella parvula HOM05D010126 ORTHO05D010466 1.0e-06 58.2 115 35.7
C08p31580 Brassica napus HOM05D010126 ORTHO05D010466 1.3e-06 57.8 238 27.7
BolC8t50779H Brassica oleracea HOM05D010126 ORTHO05D010466 1.3e-06 57.8 238 27.7
Manes.10G006100 Manihot esculenta HOM05D009452 ORTHO05D010466 1.3e-06 57.8 178 31.5
BcaC08g44773 Brassica carinata HOM05D010126 ORTHO05D010466 3.9e-06 56.2 118 35.6
A09p49230 Brassica napus HOM05D010126 ORTHO05D010466 3.9e-06 56.2 259 26.6
C06p23440 Brassica napus HOM05D010126 ORTHO05D010466 3.9e-06 56.2 118 35.6
Dinv21816 Davidia involucrata HOM05D016735 ORTHO05D012140 5.1e-06 55.8 153 32.7
HPP92_011990 Vanilla planifolia HOM05D040567 ORTHO05D025989 5.1e-06 55.8 111 38.7
BraA07t29952Z Brassica rapa HOM05D010126 ORTHO05D010466 8.6e-06 55.1 119 36.1
PSO339G0305 Papaver somniferum HOM05D053770 ORTHO05D050189 8.6e-06 55.1 110 37.3


User provided reference genes

Program Settings