Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G170800 Theobroma cacao HOM05D018277 ORTHO05D020787 4.5e-27 123.6 54 100.0
Gohir.D10G189100 Gossypium hirsutum HOM05D018277 ORTHO05D020787 1.7e-18 95.1 56 80.4
Gorai.011G212400 Gossypium raimondii HOM05D018277 ORTHO05D020787 1.7e-18 95.1 56 80.4
Gohir.A10G182400 Gossypium hirsutum HOM05D018277 ORTHO05D020787 3.8e-18 94.0 56 78.6
Gohir.A05G280300 Gossypium hirsutum HOM05D018277 ORTHO05D020787 6.3e-13 76.6 59 64.4
Gohir.D05G282100 Gossypium hirsutum HOM05D018277 ORTHO05D020787 6.3e-13 76.6 59 64.4
Gorai.009G295500 Gossypium raimondii HOM05D018277 ORTHO05D020787 6.3e-13 76.6 59 64.4
Manes.11G003500 Manihot esculenta HOM05D008152 ORTHO05D010231 8.0e-08 59.7 63 49.2
Sed0008507 Sechium edule HOM05D008152 ORTHO05D010231 8.0e-08 59.7 43 60.5
Ciclev10033235m.g Citrus clementina HOM05D008152 ORTHO05D010231 4.0e-07 57.4 31 71.0
CiPaw.09G044200 Carya illinoinensis HOM05D008152 ORTHO05D010231 5.2e-07 57.0 34 67.6
Nn2g14938 Nelumbo nucifera HOM05D008152 ORTHO05D010231 8.9e-07 56.2 38 60.5
GSVIVG01033573001 Vitis vinifera HOM05D008152 ORTHO05D010231 2.0e-06 55.1 34 61.8
Eucgr.K01615 Eucalyptus grandis HOM05D008152 ORTHO05D010231 2.6e-06 54.7 33 60.6
ClCG05G020750 Citrullus lanatus HOM05D008152 ORTHO05D010231 3.4e-06 54.3 54 51.9
Migut.K00109 Erythranthe guttata HOM05D008152 ORTHO05D010231 5.8e-06 53.5 57 47.4
COL.COLO4_33936 Corchorus olitorius HOM05D008152 ORTHO05D010231 7.5e-06 53.1 34 64.7


User provided reference genes

Program Settings