Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G153900 Theobroma cacao HOM05D024469 ORTHO05D051439 8.0e-61 236.9 117 100.0
Manes.13G004200 Manihot esculenta HOM05D000162 ORTHO05D000090 4.9e-10 68.2 115 36.5
Thecc.05G192500 Theobroma cacao HOM05D024469 ORTHO05D051439 1.4e-09 66.6 54 66.7
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 9.2e-09 63.9 110 36.4
RcHm_v2.0_Chr7g0184831 Rosa chinensis HOM05D002453 ORTHO05D008746 3.0e-07 58.9 99 33.3
EL10Ac8g20438 Beta vulgaris HOM05D002986 ORTHO05D007611 6.6e-07 57.8 95 37.9
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 8.6e-07 57.4 107 28.0
Ciclev10030383m.g Citrus clementina HOM05D000855 ORTHO05D000003 1.1e-06 57.0 106 30.2
VMungo0331G1630 Vigna mungo HOM05D002986 ORTHO05D007611 1.1e-06 57.0 95 36.8
CiPaw.10G052700 Carya illinoinensis HOM05D002986 ORTHO05D007611 1.5e-06 56.6 95 34.7
Lj6g0015281 Lotus japonicus HOM05D002986 ORTHO05D007611 1.5e-06 56.6 95 35.8
Eucgr.E03144 Eucalyptus grandis HOM05D002986 ORTHO05D007611 1.9e-06 56.2 102 34.3
FAN18G1604 Fragaria x ananassa HOM05D002453 ORTHO05D008746 1.9e-06 56.2 93 32.3
PSO210G6432 Papaver somniferum HOM05D007155 ORTHO05D003034 2.5e-06 55.8 107 32.7
Rhsim10G0193900 Rhododendron simsii HOM05D006556 ORTHO05D008146 2.5e-06 55.8 119 28.6
FAN18G1084 Fragaria x ananassa HOM05D002453 ORTHO05D008746 3.3e-06 55.5 93 32.3
MSTRG.19138 Avicennia marina HOM05D000855 ORTHO05D008530 5.6e-06 54.7 119 28.6
HanXRQChr13g0420271 Helianthus annuus HOM05D016049 ORTHO05D003288 5.6e-06 54.7 93 34.4
SGA_v2.0_scaffold83G26365 Striga asiatica HOM05D006232 ORTHO05D007746 5.6e-06 54.7 94 35.1
Aa31LG9G6870 Aethionema arabicum HOM05D002986 ORTHO05D007611 7.3e-06 54.3 95 35.8
MELO3C035724.2 Cucumis melo HOM05D002986 ORTHO05D007611 7.3e-06 54.3 95 34.7
FvH4_3g42580 Fragaria vesca HOM05D000002 ORTHO05D000001 7.3e-06 54.3 107 32.7
FAN04G2690 Fragaria x ananassa HOM05D002453 ORTHO05D008746 7.3e-06 54.3 93 31.2
Lalb_Chr18g0059371 Lupinus albus HOM05D002986 ORTHO05D007611 7.3e-06 54.3 94 36.2
ClCG03G008000 Citrullus lanatus HOM05D002986 ORTHO05D007611 9.5e-06 53.9 95 35.8
Dinv40602 Davidia involucrata HOM05D002986 ORTHO05D007611 9.5e-06 53.9 95 34.7
FAN11G0418 Fragaria x ananassa HOM05D003757 ORTHO05D000090 9.5e-06 53.9 107 32.7
MD10G1288900 Malus domestica HOM05D002986 ORTHO05D007611 9.5e-06 53.9 95 34.7
Phvul.009G206300 Phaseolus vulgaris HOM05D000104 ORTHO05D009920 9.5e-06 53.9 103 28.2
TPR.G25962 Trifolium pratense HOM05D002986 ORTHO05D007611 9.5e-06 53.9 95 34.7
vmacro13799 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 9.5e-06 53.9 108 31.5
Zm00001eb027640 Zea mays HOM05D006931 ORTHO05D008782 9.5e-06 53.9 96 33.3


User provided reference genes

Program Settings