Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G135900 Theobroma cacao HOM05D002630 ORTHO05D000952 3.1e-40 167.9 81 100.0
Thecc.10G132600 Theobroma cacao HOM05D002630 ORTHO05D000952 7.0e-40 166.8 81 98.8
Thecc.10G133400 Theobroma cacao HOM05D002630 ORTHO05D000952 9.1e-40 166.4 81 98.8
Thecc.10G132400 Theobroma cacao HOM05D002630 ORTHO05D000952 3.6e-36 154.5 81 90.1
Thecc.10G134900 Theobroma cacao HOM05D002630 ORTHO05D000952 1.8e-35 152.1 81 90.1
COL.COLO4_33115 Corchorus olitorius HOM05D002630 ORTHO05D000952 6.4e-17 90.5 73 53.4
Thecc.10G139400 Theobroma cacao HOM05D002630 ORTHO05D000952 1.2e-15 86.3 62 67.7
COL.COLO4_18802 Corchorus olitorius HOM05D002630 ORTHO05D000952 1.6e-15 85.9 76 51.3
Sed0020443 Sechium edule HOM05D002630 ORTHO05D000952 3.6e-12 74.7 76 47.4
Ciclev10013691m.g Citrus clementina HOM05D002630 ORTHO05D000952 6.8e-11 70.5 83 48.2
Ciclev10013879m.g Citrus clementina HOM05D002630 ORTHO05D000952 6.8e-11 70.5 83 48.2
Prupe.3G065000 Prunus persica HOM05D002630 ORTHO05D000952 1.2e-10 69.7 80 45.0
MELO3C027409.2 Cucumis melo HOM05D002630 ORTHO05D000952 2.0e-10 68.9 77 44.2
CsaV3_4G025380 Cucumis sativus L. HOM05D002630 ORTHO05D000952 4.4e-10 67.8 80 43.8
Ciclev10013622m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.8e-10 67.4 72 51.4
Sed0001946 Sechium edule HOM05D002630 ORTHO05D000952 1.3e-09 66.2 80 41.2
ClCG07G002360 Citrullus lanatus HOM05D002630 ORTHO05D000952 1.7e-09 65.9 80 43.8
Ciclev10024200m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.7e-09 65.9 75 46.7
Medtr1g045470 Medicago truncatula HOM05D002630 ORTHO05D000952 1.7e-09 65.9 65 52.3
Prupe.4G230900 Prunus persica HOM05D002630 ORTHO05D000952 1.7e-09 65.9 73 45.2
Prupe.4G231000 Prunus persica HOM05D002630 ORTHO05D000952 1.7e-09 65.9 73 45.2
Sed0024693 Sechium edule HOM05D002630 ORTHO05D000952 2.2e-09 65.5 76 43.4
MELO3C009980.2 Cucumis melo HOM05D002630 ORTHO05D000952 3.7e-09 64.7 81 43.2
CsaV3_1G044320 Cucumis sativus L. HOM05D002630 ORTHO05D000952 3.7e-09 64.7 73 42.5
FAN02G1492 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.9e-09 64.3 78 44.9
Lj5g0002813 Lotus japonicus HOM05D002630 ORTHO05D000952 8.3e-09 63.5 77 45.5
Prupe.I005300 Prunus persica HOM05D002630 ORTHO05D000952 1.1e-08 63.2 73 45.2
Prupe.4G246100 Prunus persica HOM05D002630 ORTHO05D000952 1.4e-08 62.8 73 45.2
arahy.Tifrunner.gnm1.ann1.HJ0R1G Arachis hypogaea HOM05D002630 ORTHO05D000952 2.4e-08 62.0 80 40.0
arahy.Tifrunner.gnm1.ann1.I4FPAQ Arachis hypogaea HOM05D002630 ORTHO05D000952 2.4e-08 62.0 80 40.0
arahy.Tifrunner.gnm1.ann1.W8FFAE Arachis hypogaea HOM05D002630 ORTHO05D000952 2.4e-08 62.0 80 40.0
Atru.chr5.447 Acer truncatum HOM05D002630 ORTHO05D000952 4.1e-08 61.2 76 44.7
Atru.chr5.457 Acer truncatum HOM05D001542 ORTHO05D000952 4.1e-08 61.2 77 44.2
Ciclev10033879m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.1e-08 61.2 82 48.8
Psat6g011840 Pisum sativum HOM05D028744 ORTHO05D000952 4.1e-08 61.2 72 44.4
QL12p024328 Quercus lobata HOM05D002630 ORTHO05D000952 4.1e-08 61.2 89 42.7
TPR.G24281 Trifolium pratense HOM05D002630 ORTHO05D000952 4.1e-08 61.2 67 46.3
Atru.chr1.1532 Acer truncatum HOM05D002630 ORTHO05D000952 5.4e-08 60.8 60 51.7
Atru.chr1.1696 Acer truncatum HOM05D002630 ORTHO05D000952 5.4e-08 60.8 60 51.7
Ciclev10033719m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.4e-08 60.8 65 52.3
FAN09G2675 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.4e-08 60.8 75 45.3
Ciclev10033957m.g Citrus clementina HOM05D002630 ORTHO05D000952 7.1e-08 60.5 83 47.0
Atru.chr1.1517 Acer truncatum HOM05D002630 ORTHO05D000952 9.2e-08 60.1 59 50.8
Atru.chr1.1697 Acer truncatum HOM05D002630 ORTHO05D000952 9.2e-08 60.1 59 50.8
Ciclev10023312m.g Citrus clementina HOM05D002630 ORTHO05D000952 9.2e-08 60.1 79 41.8
Ciclev10033459m.g Citrus clementina HOM05D002630 ORTHO05D000952 9.2e-08 60.1 65 52.3
Atru.chr5.431 Acer truncatum HOM05D002630 ORTHO05D000952 1.2e-07 59.7 79 45.6
Ciclev10033346m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.2e-07 59.7 83 47.0
Ciclev10033536m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.2e-07 59.7 83 47.0
Ciclev10033541m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.2e-07 59.7 83 47.0
FvH4_6g39600 Fragaria vesca HOM05D002630 ORTHO05D000952 1.2e-07 59.7 78 42.3
FAN14G5613 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-07 59.7 78 42.3
Atru.chr5.426 Acer truncatum HOM05D002630 ORTHO05D000952 2.1e-07 58.9 75 44.0
Prupe.4G230600 Prunus persica HOM05D002630 ORTHO05D000952 2.1e-07 58.9 86 39.5
Ciclev10026981m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.5e-07 58.2 66 47.0
Haze_04835 Corylus avellana HOM05D005315 ORTHO05D006589 3.5e-07 58.2 76 42.1
Ciclev10013730m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.6e-07 57.8 81 40.7
Ciclev10033436m.g Citrus clementina HOM05D002630 ORTHO05D000952 7.8e-07 57.0 83 45.8
FvH4_6g39190 Fragaria vesca HOM05D002630 ORTHO05D000952 7.8e-07 57.0 78 41.0
FvH4_6g39200 Fragaria vesca HOM05D002630 ORTHO05D000952 7.8e-07 57.0 78 41.0
FAN05G0057 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.8e-07 57.0 78 41.0
FAN09G4772 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.8e-07 57.0 78 41.0
arahy.Tifrunner.gnm1.ann1.UEI6NJ Arachis hypogaea HOM05D002630 ORTHO05D000952 1.0e-06 56.6 78 41.0
FAN05G2844 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.0e-06 56.6 78 41.0
FAN14G2281 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.0e-06 56.6 78 41.0
FAN14G5590 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.0e-06 56.6 78 41.0
Ciclev10013626m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.3e-06 56.2 81 39.5
Prupe.3G111400 Prunus persica HOM05D002630 ORTHO05D000952 1.3e-06 56.2 72 40.3
ClCG07G002020 Citrullus lanatus HOM05D002630 ORTHO05D000952 1.7e-06 55.8 79 41.8
Haze_23644 Corylus avellana HOM05D002630 ORTHO05D000952 1.7e-06 55.8 76 40.8
FAN05G2222 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.7e-06 55.8 78 39.7
FAN24G3101 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.3e-06 55.5 74 40.5
RcHm_v2.0_Chr7g0231191 Rosa chinensis HOM05D002630 ORTHO05D000952 2.3e-06 55.5 78 38.5
Cfa010188 Carpinus fangiana HOM05D002630 ORTHO05D000952 3.0e-06 55.1 72 41.7
Ciclev10033526m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.0e-06 55.1 83 45.8
Ciclev10033744m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.0e-06 55.1 83 45.8
FAN02G4413 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.0e-06 55.1 78 39.7
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 3.0e-06 55.1 78 37.2
Haze_23576 Corylus avellana HOM05D002630 ORTHO05D000952 3.9e-06 54.7 72 41.7
Atru.chr1.394 Acer truncatum HOM05D002630 ORTHO05D000952 5.1e-06 54.3 62 46.8
MELO3C030697.2 Cucumis melo HOM05D002630 ORTHO05D000952 5.1e-06 54.3 80 38.8
FAN15G3021 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.1e-06 54.3 74 40.5
Medtr1g053575 Medicago truncatula HOM05D002630 ORTHO05D000952 5.1e-06 54.3 73 42.5
QL05p044180 Quercus lobata HOM05D002630 ORTHO05D000952 5.1e-06 54.3 81 37.0
Atru.chr12.1167 Acer truncatum HOM05D002630 ORTHO05D000952 6.6e-06 53.9 75 38.7
Medtr1g019820 Medicago truncatula HOM05D028744 ORTHO05D000952 6.6e-06 53.9 77 39.0
TWI75G0791 Tripterygium wilfordii HOM05D002630 ORTHO05D000952 8.6e-06 53.5 75 42.7


User provided reference genes

Program Settings