Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G132600 Theobroma cacao HOM05D002630 ORTHO05D000952 3.1e-40 167.9 81 100.0
Thecc.10G135900 Theobroma cacao HOM05D002630 ORTHO05D000952 7.0e-40 166.8 81 98.8
Thecc.10G133400 Theobroma cacao HOM05D002630 ORTHO05D000952 2.0e-39 165.2 81 97.5
Thecc.10G132400 Theobroma cacao HOM05D002630 ORTHO05D000952 8.0e-36 153.3 81 88.9
Thecc.10G134900 Theobroma cacao HOM05D002630 ORTHO05D000952 4.0e-35 151.0 81 88.9
COL.COLO4_33115 Corchorus olitorius HOM05D002630 ORTHO05D000952 1.9e-16 89.0 73 52.1
Thecc.10G139400 Theobroma cacao HOM05D002630 ORTHO05D000952 2.7e-15 85.1 62 66.1
COL.COLO4_18802 Corchorus olitorius HOM05D002630 ORTHO05D000952 3.5e-15 84.7 76 50.0
Sed0020443 Sechium edule HOM05D002630 ORTHO05D000952 1.1e-11 73.2 76 46.1
Ciclev10013691m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.2e-11 70.9 83 48.2
Ciclev10013879m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.2e-11 70.9 83 48.2
MELO3C027409.2 Cucumis melo HOM05D002630 ORTHO05D000952 1.5e-10 69.3 77 44.2
Prupe.3G065000 Prunus persica HOM05D002630 ORTHO05D000952 3.4e-10 68.2 80 43.8
CsaV3_4G025380 Cucumis sativus L. HOM05D002630 ORTHO05D000952 4.4e-10 67.8 80 43.8
Ciclev10013622m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.8e-10 67.4 72 51.4
Ciclev10024200m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.3e-09 66.2 75 46.7
Sed0001946 Sechium edule HOM05D002630 ORTHO05D000952 1.3e-09 66.2 80 41.2
ClCG07G002360 Citrullus lanatus HOM05D002630 ORTHO05D000952 1.7e-09 65.9 80 43.8
Sed0024693 Sechium edule HOM05D002630 ORTHO05D000952 2.2e-09 65.5 76 43.4
CsaV3_1G044320 Cucumis sativus L. HOM05D002630 ORTHO05D000952 2.9e-09 65.1 73 42.5
MELO3C009980.2 Cucumis melo HOM05D002630 ORTHO05D000952 3.7e-09 64.7 81 43.2
FAN02G1492 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.7e-09 64.7 78 44.9
Medtr1g045470 Medicago truncatula HOM05D002630 ORTHO05D000952 3.7e-09 64.7 65 50.8
Prupe.4G230900 Prunus persica HOM05D002630 ORTHO05D000952 3.7e-09 64.7 73 43.8
Prupe.4G231000 Prunus persica HOM05D002630 ORTHO05D000952 3.7e-09 64.7 73 43.8
arahy.Tifrunner.gnm1.ann1.HJ0R1G Arachis hypogaea HOM05D002630 ORTHO05D000952 1.9e-08 62.4 80 40.0
arahy.Tifrunner.gnm1.ann1.I4FPAQ Arachis hypogaea HOM05D002630 ORTHO05D000952 1.9e-08 62.4 80 40.0
arahy.Tifrunner.gnm1.ann1.W8FFAE Arachis hypogaea HOM05D002630 ORTHO05D000952 1.9e-08 62.4 80 40.0
Lj5g0002813 Lotus japonicus HOM05D002630 ORTHO05D000952 2.4e-08 62.0 77 44.2
Prupe.I005300 Prunus persica HOM05D002630 ORTHO05D000952 2.4e-08 62.0 73 43.8
Atru.chr5.447 Acer truncatum HOM05D002630 ORTHO05D000952 3.2e-08 61.6 76 46.1
Atru.chr5.457 Acer truncatum HOM05D001542 ORTHO05D000952 3.2e-08 61.6 77 45.5
Prupe.4G246100 Prunus persica HOM05D002630 ORTHO05D000952 3.2e-08 61.6 73 43.8
QL12p024328 Quercus lobata HOM05D002630 ORTHO05D000952 3.2e-08 61.6 89 42.7
Ciclev10033879m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.1e-08 61.2 82 48.8
FAN09G2675 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.1e-08 61.2 75 45.3
Ciclev10033719m.g Citrus clementina HOM05D002630 ORTHO05D000952 5.4e-08 60.8 65 52.3
Ciclev10023312m.g Citrus clementina HOM05D002630 ORTHO05D000952 7.1e-08 60.5 79 41.8
Ciclev10033957m.g Citrus clementina HOM05D002630 ORTHO05D000952 7.1e-08 60.5 83 47.0
Atru.chr5.431 Acer truncatum HOM05D002630 ORTHO05D000952 9.2e-08 60.1 79 46.8
Ciclev10033459m.g Citrus clementina HOM05D002630 ORTHO05D000952 9.2e-08 60.1 65 52.3
FvH4_6g39600 Fragaria vesca HOM05D002630 ORTHO05D000952 9.2e-08 60.1 78 42.3
FAN14G5613 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.2e-08 60.1 78 42.3
Atru.chr1.1532 Acer truncatum HOM05D002630 ORTHO05D000952 1.2e-07 59.7 60 50.0
Atru.chr1.1696 Acer truncatum HOM05D002630 ORTHO05D000952 1.2e-07 59.7 60 50.0
Ciclev10033346m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.2e-07 59.7 83 47.0
Ciclev10033536m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.2e-07 59.7 83 47.0
Ciclev10033541m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.2e-07 59.7 83 47.0
Psat6g011840 Pisum sativum HOM05D028744 ORTHO05D000952 1.2e-07 59.7 72 43.1
TPR.G24281 Trifolium pratense HOM05D002630 ORTHO05D000952 1.2e-07 59.7 67 44.8
Atru.chr5.426 Acer truncatum HOM05D002630 ORTHO05D000952 1.6e-07 59.3 75 45.3
Haze_04835 Corylus avellana HOM05D005315 ORTHO05D006589 1.6e-07 59.3 76 43.4
Atru.chr1.1517 Acer truncatum HOM05D002630 ORTHO05D000952 2.1e-07 58.9 59 49.2
Atru.chr1.1697 Acer truncatum HOM05D002630 ORTHO05D000952 2.1e-07 58.9 59 49.2
Ciclev10026981m.g Citrus clementina HOM05D002630 ORTHO05D000952 2.7e-07 58.5 66 47.0
Ciclev10013730m.g Citrus clementina HOM05D002630 ORTHO05D000952 4.6e-07 57.8 81 40.7
Prupe.4G230600 Prunus persica HOM05D002630 ORTHO05D000952 4.6e-07 57.8 86 38.4
FvH4_6g39190 Fragaria vesca HOM05D002630 ORTHO05D000952 6.0e-07 57.4 78 41.0
FvH4_6g39200 Fragaria vesca HOM05D002630 ORTHO05D000952 6.0e-07 57.4 78 41.0
FAN05G0057 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.0e-07 57.4 78 41.0
FAN09G4772 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.0e-07 57.4 78 41.0
Ciclev10033436m.g Citrus clementina HOM05D002630 ORTHO05D000952 7.8e-07 57.0 83 45.8
Haze_23644 Corylus avellana HOM05D002630 ORTHO05D000952 7.8e-07 57.0 76 42.1
FAN05G2844 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.8e-07 57.0 78 41.0
FAN14G2281 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.8e-07 57.0 78 41.0
FAN14G5590 Fragaria x ananassa HOM05D002630 ORTHO05D000952 7.8e-07 57.0 78 41.0
arahy.Tifrunner.gnm1.ann1.UEI6NJ Arachis hypogaea HOM05D002630 ORTHO05D000952 1.0e-06 56.6 78 41.0
RcHm_v2.0_Chr7g0231191 Rosa chinensis HOM05D002630 ORTHO05D000952 1.0e-06 56.6 78 39.7
ClCG07G002020 Citrullus lanatus HOM05D002630 ORTHO05D000952 1.3e-06 56.2 79 41.8
Ciclev10013626m.g Citrus clementina HOM05D002630 ORTHO05D000952 1.3e-06 56.2 81 39.5
FAN05G2222 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.3e-06 56.2 78 39.7
FAN02G4413 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.3e-06 55.5 78 39.7
Cfa010188 Carpinus fangiana HOM05D002630 ORTHO05D000952 3.0e-06 55.1 72 41.7
Ciclev10033526m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.0e-06 55.1 83 45.8
Ciclev10033744m.g Citrus clementina HOM05D002630 ORTHO05D000952 3.0e-06 55.1 83 45.8
Atru.chr12.1167 Acer truncatum HOM05D002630 ORTHO05D000952 3.9e-06 54.7 75 40.0
MELO3C030697.2 Cucumis melo HOM05D002630 ORTHO05D000952 3.9e-06 54.7 80 38.8
Prupe.3G111400 Prunus persica HOM05D002630 ORTHO05D000952 3.9e-06 54.7 72 38.9
Medtr1g053575 Medicago truncatula HOM05D002630 ORTHO05D000952 5.1e-06 54.3 73 42.5
QL05p044180 Quercus lobata HOM05D002630 ORTHO05D000952 5.1e-06 54.3 81 37.0
FAN24G3101 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.6e-06 53.9 74 39.2
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 6.6e-06 53.9 78 35.9
TWI75G0791 Tripterygium wilfordii HOM05D002630 ORTHO05D000952 8.6e-06 53.5 75 45.3


User provided reference genes

Program Settings