Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 8.9e-201 703.4 348 100.0
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 4.3e-155 551.6 299 90.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 1.5e-152 543.1 354 79.4
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.5e-152 541.6 354 79.1
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.2e-151 539.3 354 79.1
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 4.5e-144 515.0 351 73.5
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.5e-142 509.2 297 85.5
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 2.7e-141 505.8 347 72.3
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.4e-140 503.4 317 75.7
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 8.8e-140 500.7 313 77.6
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 9.7e-139 497.3 347 72.0
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 8.2e-138 494.2 350 71.7
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 5.3e-137 491.5 297 79.5
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 4.5e-136 488.4 351 69.5
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 7.7e-136 487.6 351 68.9
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.0e-135 487.3 351 68.9
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 3.8e-135 485.3 343 72.0
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 8.5e-135 484.2 317 74.4
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 4.2e-134 481.9 329 72.9
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 4.2e-134 481.9 296 76.0
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 2.7e-133 479.2 315 74.3
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 3.6e-133 478.8 319 73.0
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 3.6e-133 478.8 313 74.1
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 8.0e-133 477.6 290 78.3
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 2.3e-132 476.1 342 70.8
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 4.0e-132 475.3 345 71.0
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.5e-131 473.4 313 72.2
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 2.0e-131 473.0 311 73.3
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 4.4e-131 471.9 325 70.8
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 3.7e-130 468.8 337 68.2
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 6.3e-130 468.0 316 73.4
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 1.1e-129 467.2 287 76.3
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 1.8e-129 466.5 335 70.4
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 1.8e-129 466.5 318 73.6
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 4.1e-129 465.3 364 66.5
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 7.0e-129 464.5 300 75.0
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 4.5e-128 461.8 287 75.6
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 4.5e-128 461.8 306 73.9
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 7.7e-128 461.1 288 76.0
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 2.9e-127 459.1 318 73.0
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 1.9e-126 456.4 352 66.5
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.9e-126 456.4 319 69.6
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.5e-126 456.1 271 81.2
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 4.2e-126 455.3 317 71.6
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 5.5e-126 454.9 345 67.2
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 1.2e-125 453.8 287 75.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 1.6e-125 453.4 316 69.6
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 1.6e-125 453.4 320 70.0
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 2.1e-125 453.0 302 73.2
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 6.8e-124 448.0 294 74.8
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 2.0e-123 446.4 288 75.3
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 2.0e-123 446.4 315 69.5
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 2.0e-123 446.4 348 65.5
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 2.6e-123 446.0 302 71.2
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 5.7e-123 444.9 296 71.6
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 9.8e-123 444.1 316 71.5
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.3e-122 443.7 286 75.5
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 1.7e-122 443.4 288 74.0
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 3.7e-122 442.2 300 72.3
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 1.1e-121 440.7 281 76.9
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.1e-121 440.7 329 67.2
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 1.4e-121 440.3 288 72.6
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.8e-121 439.9 375 62.7
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 5.4e-121 438.3 291 71.8
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 9.1e-121 437.6 320 67.5
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.6e-120 436.8 310 70.0
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 3.5e-120 435.6 311 69.8
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 4.5e-120 435.3 276 76.4
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.3e-119 433.7 301 71.1
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.3e-119 433.7 290 72.4
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.2e-119 433.0 312 67.9
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.2e-119 433.0 312 67.9
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 5.0e-119 431.8 318 69.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.5e-118 430.3 290 71.7
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 7.2e-118 427.9 310 67.1
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.8e-116 423.3 286 72.4
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 3.0e-116 422.5 274 73.0
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.4e-115 419.1 325 65.2
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 6.6e-111 404.8 286 70.6
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.8e-108 396.7 270 74.1
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.0e-108 395.6 314 65.6
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.2e-107 394.0 296 66.9
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.7e-104 382.9 273 70.7
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 2.7e-104 382.9 268 68.7
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.6e-103 378.3 281 66.9
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 3.3e-102 375.9 291 65.3
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.8e-101 372.9 290 64.5
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.5e-99 367.1 298 64.4
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 5.8e-99 365.2 217 80.2
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 2.2e-98 363.2 286 62.6
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.2e-97 357.8 272 66.9
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 7.3e-94 348.2 291 61.5
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 2.0e-91 340.1 266 61.7
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 6.8e-84 315.1 205 74.1
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 2.9e-82 309.7 251 65.3
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.5e-78 297.4 217 68.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 6.2e-77 292.0 391 42.2
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.4e-67 259.6 160 78.8
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 2.4e-65 253.4 311 51.4
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 2.7e-64 250.0 170 72.4
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 2.5e-62 243.4 157 73.9
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 4.0e-60 236.1 191 63.9
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 4.2e-57 226.1 142 76.1
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.9e-50 202.6 251 47.8
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 8.7e-47 191.8 107 80.4
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 3.4e-43 179.9 107 77.6
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.7e-40 170.2 184 52.7
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-39 167.9 184 52.2
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.4e-36 157.9 98 75.5
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 4.1e-36 156.4 89 82.0
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.5e-33 147.1 82 84.1
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 2.5e-25 120.6 66 78.8
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.8e-23 114.4 144 47.9
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 3.1e-20 103.6 60 81.7
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 2.0e-19 100.9 80 63.8
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 4.7e-16 89.7 60 73.3
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-15 87.8 56 76.8
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 4.5e-11 73.2 41 80.5
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 8.5e-10 68.9 44 77.3
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.5e-09 68.2 81 45.7
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.2e-09 67.0 43 74.4
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 1.4e-07 61.6 34 85.3
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 2.6e-06 57.4 42 66.7


User provided reference genes

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