Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G096800 Theobroma cacao HOM05D000534 ORTHO05D408164 1.7e-42 175.6 91 100.0
Thecc.10G096700 Theobroma cacao HOM05D000534 ORTHO05D000389 2.3e-07 58.9 37 75.7
Thecc.10G097300 Theobroma cacao HOM05D000534 ORTHO05D000389 2.3e-07 58.9 37 75.7
Thecc.10G096900 Theobroma cacao HOM05D000534 ORTHO05D000389 3.0e-07 58.5 37 75.7
Thecc.10G097000 Theobroma cacao HOM05D000534 ORTHO05D000389 3.0e-07 58.5 37 75.7
COL.COLO4_34183 Corchorus olitorius HOM05D000534 ORTHO05D000389 3.9e-07 58.2 40 65.0
COL.COLO4_05369 Corchorus olitorius HOM05D000534 ORTHO05D000389 6.7e-07 57.4 38 63.2
Duzib106G0713 Durio zibethinus HOM05D000534 ORTHO05D000389 8.8e-07 57.0 37 70.3
COL.COLO4_33716 Corchorus olitorius HOM05D000534 ORTHO05D000389 1.1e-06 56.6 68 45.6
Gohir.A05G289500 Gossypium hirsutum HOM05D000534 ORTHO05D000389 1.1e-06 56.6 37 67.6
Gohir.D05G290900 Gossypium hirsutum HOM05D000534 ORTHO05D000389 1.1e-06 56.6 37 67.6
Gorai.009G306100 Gossypium raimondii HOM05D000534 ORTHO05D000389 1.1e-06 56.6 37 67.6
Duzib106G1294 Durio zibethinus HOM05D000534 ORTHO05D000389 2.0e-06 55.8 37 67.6
CiPaw.14G014600 Carya illinoinensis HOM05D000534 ORTHO05D000389 2.6e-06 55.5 37 62.2
CiPaw.14G014900 Carya illinoinensis HOM05D000534 ORTHO05D000389 2.6e-06 55.5 37 64.9
CiPaw.14G015000 Carya illinoinensis HOM05D000534 ORTHO05D000389 2.6e-06 55.5 37 64.9
Eucgr.D01141 Eucalyptus grandis HOM05D000534 ORTHO05D000389 2.6e-06 55.5 37 62.2
CiPaw.14G014700 Carya illinoinensis HOM05D000534 ORTHO05D000389 3.3e-06 55.1 37 64.9
CiPaw.14G015100 Carya illinoinensis HOM05D000534 ORTHO05D000389 3.3e-06 55.1 37 64.9
Lj4g0018444 Lotus japonicus HOM05D000534 ORTHO05D000389 4.4e-06 54.7 39 61.5
VMungo1215G0581 Vigna mungo HOM05D000534 ORTHO05D000389 4.4e-06 54.7 40 55.0
Duzib114G1001 Durio zibethinus HOM05D000534 ORTHO05D000389 5.7e-06 54.3 37 62.2
Glyma.11G088600 Glycine max HOM05D000534 ORTHO05D000389 5.7e-06 54.3 54 48.1
QL06p053388 Quercus lobata HOM05D000534 ORTHO05D000389 7.4e-06 53.9 37 59.5
Rhsim10G0190900 Rhododendron simsii HOM05D000534 ORTHO05D000389 7.4e-06 53.9 39 56.4
Sabra16G0308700 Salix brachista HOM05D000534 ORTHO05D000389 7.4e-06 53.9 55 47.3
TPR.G35827 Trifolium pratense HOM05D000534 ORTHO05D000389 7.4e-06 53.9 39 64.1
vmacro20402 Vaccinium macrocarpon HOM05D000534 ORTHO05D000389 7.4e-06 53.9 39 56.4
GSVIVG01026431001 Vitis vinifera HOM05D000534 ORTHO05D000389 7.4e-06 53.9 37 64.9
CiPaw.14G014800 Carya illinoinensis HOM05D000534 ORTHO05D000389 9.7e-06 53.5 37 62.2
Glyma.01G156200 Glycine max HOM05D000534 ORTHO05D000389 9.7e-06 53.5 54 46.3
Phvul.002G119300 Phaseolus vulgaris HOM05D000534 ORTHO05D000389 9.7e-06 53.5 40 52.5
Potri.001G456400 Populus trichocarpa HOM05D000534 ORTHO05D000389 9.7e-06 53.5 55 47.3
QL04p025418 Quercus lobata HOM05D000534 ORTHO05D000389 9.7e-06 53.5 37 62.2


User provided reference genes

Program Settings