Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G043600 Theobroma cacao HOM05D016357 ORTHO05D019054 4.4e-120 434.5 197 100.0
COL.COLO4_15016 Corchorus olitorius HOM05D016357 ORTHO05D019054 6.7e-44 181.4 185 48.1
COL.COLO4_15018 Corchorus olitorius HOM05D016357 ORTHO05D019054 1.9e-43 179.9 184 47.3
Gohir.D10G226400 Gossypium hirsutum HOM05D016357 ORTHO05D019054 7.6e-40 167.9 177 51.4
Gohir.D10G226500 Gossypium hirsutum HOM05D016357 ORTHO05D019054 7.6e-40 167.9 177 51.4
Gorai.011G257500 Gossypium raimondii HOM05D016357 ORTHO05D019054 7.6e-40 167.9 177 51.4
Gohir.A10G217525 Gossypium hirsutum HOM05D016357 ORTHO05D019054 1.9e-38 163.3 177 49.2
COL.COLO4_15015 Corchorus olitorius HOM05D016357 ORTHO05D019054 5.3e-33 145.2 180 44.4
Potri.008G055200 Populus trichocarpa HOM05D000790 ORTHO05D000769 2.2e-26 123.2 170 38.8
Thecc.09G193000 Theobroma cacao HOM05D000790 ORTHO05D000769 7.7e-24 114.8 178 38.2
Potri.010G204600 Populus trichocarpa HOM05D000790 ORTHO05D000769 1.0e-23 114.4 170 40.6
Potri.010G205100 Populus trichocarpa HOM05D000790 ORTHO05D000769 8.5e-23 111.3 170 38.8
Sabra10G0158100 Salix brachista HOM05D000790 ORTHO05D000769 2.5e-22 109.8 188 38.3
Sabra10G0158800 Salix brachista HOM05D000062 ORTHO05D000043 7.2e-22 108.2 183 37.2
TAR633G0532 Trochodendron aralioides HOM05D000062 ORTHO05D000043 3.9e-20 102.4 170 37.6
Nn2g10386 Nelumbo nucifera HOM05D000790 ORTHO05D000769 2.6e-19 99.8 169 34.3
MSTRG.20115 Avicennia marina HOM05D000790 ORTHO05D000769 3.3e-19 99.4 170 32.9
Thecc.10G043400 Theobroma cacao HOM05D000790 ORTHO05D000769 7.4e-19 98.2 178 33.1
Sabra08G0039800 Salix brachista HOM05D000790 ORTHO05D000769 1.7e-18 97.1 142 38.0
QL08p059291 Quercus lobata HOM05D000790 ORTHO05D000769 2.8e-18 96.3 178 33.7
Ah.01g019730 Amaranthus hybridus HOM05D000790 ORTHO05D000769 6.3e-18 95.1 172 31.4
Duzib106G0271 Durio zibethinus HOM05D000790 ORTHO05D000769 8.2e-18 94.7 185 32.4
TAR371G0973 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.8e-17 93.6 174 34.5
EL10Ac9g21776 Beta vulgaris HOM05D000790 ORTHO05D000769 4.1e-17 92.4 188 29.3
Gohir.A10G217575 Gossypium hirsutum HOM05D000790 ORTHO05D000769 4.1e-17 92.4 175 32.6
COL.COLO4_15030 Corchorus olitorius HOM05D000790 ORTHO05D000769 9.1e-17 91.3 172 34.3
Manes.07G115600 Manihot esculenta HOM05D000790 ORTHO05D000769 1.2e-16 90.9 174 33.3
Gohir.A10G217600 Gossypium hirsutum HOM05D000790 ORTHO05D000769 2.6e-16 89.7 173 32.4
QL08p059279 Quercus lobata HOM05D000790 ORTHO05D000769 2.6e-16 89.7 180 33.9
TAR623G0965 Trochodendron aralioides HOM05D000790 ORTHO05D000769 2.6e-16 89.7 180 32.8
TAR623G1385 Trochodendron aralioides HOM05D000790 ORTHO05D000769 2.6e-16 89.7 180 32.2
TWI75G0542 Tripterygium wilfordii HOM05D000790 ORTHO05D000769 1.0e-15 87.8 162 32.7
SalBow6G2472 Salvia bowleyana HOM05D000790 ORTHO05D000769 1.7e-15 87.0 170 31.2
PSO063G5947 Papaver somniferum HOM05D000790 ORTHO05D000769 2.9e-15 86.3 170 32.9
Manes.07G115500 Manihot esculenta HOM05D000790 ORTHO05D000769 3.8e-15 85.9 173 32.4
Cfa001479 Carpinus fangiana HOM05D000790 ORTHO05D000769 8.5e-15 84.7 212 31.6
Gorai.011G257700 Gossypium raimondii HOM05D000790 ORTHO05D000769 1.5e-14 84.0 171 32.7
Os12g0596300 Oryza sativa ssp. japonica HOM05D000790 ORTHO05D000769 1.5e-14 84.0 128 37.5
CiPaw.01G288500 Carya illinoinensis HOM05D000790 ORTHO05D000769 1.9e-14 83.6 183 30.1
Prupe.8G107200 Prunus persica HOM05D000790 ORTHO05D000769 1.9e-14 83.6 123 35.0
Gohir.D10G226833 Gossypium hirsutum HOM05D000790 ORTHO05D000769 3.2e-14 82.8 173 34.1
Gohir.D10G226800 Gossypium hirsutum HOM05D000790 ORTHO05D000769 7.2e-14 81.6 171 32.2
SEGI_15555 Sequoiadendron giganteum HOM05D000790 ORTHO05D007702 7.2e-14 81.6 169 32.0
Peaxi162Scf00318g00089 Petunia axillaris HOM05D000790 ORTHO05D000769 1.6e-13 80.5 168 31.0
Gorai.011G257900 Gossypium raimondii HOM05D000790 ORTHO05D000769 2.1e-13 80.1 173 32.4
HPP92_019644 Vanilla planifolia HOM05D000790 ORTHO05D000769 1.8e-12 77.0 126 36.5
SEGI_39996 Sequoiadendron giganteum HOM05D000790 ORTHO05D007702 3.9e-12 75.9 197 29.4
Migut.J00283 Erythranthe guttata HOM05D000790 ORTHO05D000769 8.8e-12 74.7 190 27.4
Ciclev10030893m.g Citrus clementina HOM05D000062 ORTHO05D000043 1.5e-11 73.9 194 28.9
Dinv26011 Davidia involucrata HOM05D000790 ORTHO05D000769 1.5e-11 73.9 193 28.5
ATR0605G280 Amborella trichopoda HOM05D000790 ORTHO05D007702 1.7e-10 70.5 170 31.8
Duzib106G1283 Durio zibethinus HOM05D000790 ORTHO05D000769 1.7e-10 70.5 166 30.7
Migut.J00282 Erythranthe guttata HOM05D000790 ORTHO05D000769 1.7e-10 70.5 193 26.9
SEGI_38645 Sequoiadendron giganteum HOM05D000790 ORTHO05D007702 1.7e-10 70.5 167 31.1
Actinidia11288 Actinidia chinensis HOM05D000790 ORTHO05D000769 8.2e-10 68.2 186 27.4
TAR633G0844 Trochodendron aralioides HOM05D000790 ORTHO05D000769 8.2e-10 68.2 114 36.0
CAN.G475.2 Capsicum annuum HOM05D000790 ORTHO05D000769 3.1e-09 66.2 167 28.7
Nitab4.5_0003098g0020 Nicotiana tabacum HOM05D000790 ORTHO05D000769 3.1e-09 66.2 122 32.8
arahy.Tifrunner.gnm1.ann1.XC3ZVB Arachis hypogaea HOM05D000790 ORTHO05D000769 7.0e-09 65.1 162 27.2
arahy.Tifrunner.gnm1.ann1.ZJXA12 Arachis hypogaea HOM05D000790 ORTHO05D000769 7.0e-09 65.1 162 27.2
Migut.C00338 Erythranthe guttata HOM05D000790 ORTHO05D007702 9.1e-09 64.7 112 33.9
Peaxi162Scf00318g00726 Petunia axillaris HOM05D000790 ORTHO05D000769 9.1e-09 64.7 175 30.3
SEGI_25598 Sequoiadendron giganteum HOM05D000790 ORTHO05D000769 9.1e-09 64.7 160 30.0
Sopen09g006010 Solanum pennellii HOM05D010579 ORTHO05D013053 9.1e-09 64.7 117 35.0
Hma1.2p1_3154F.1_g333350 Hydrangea macrophylla HOM05D000790 ORTHO05D000769 1.6e-08 63.9 172 30.8
Peaxi162Scf00318g00811 Petunia axillaris HOM05D000790 ORTHO05D000769 1.6e-08 63.9 178 29.8
CANSAT25G2520 Cannabis sativa HOM05D000790 ORTHO05D007702 2.6e-08 63.2 113 36.3
Nitab4.5_0003098g0090 Nicotiana tabacum HOM05D000790 ORTHO05D000769 2.6e-08 63.2 116 32.8
TPR.G22376 Trifolium pratense HOM05D000790 ORTHO05D007702 3.5e-08 62.8 182 28.6
Eucgr.F03617 Eucalyptus grandis HOM05D000790 ORTHO05D007702 4.5e-08 62.4 123 31.7
arahy.Tifrunner.gnm1.ann1.VWX0K0 Arachis hypogaea HOM05D000790 ORTHO05D000769 5.9e-08 62.0 160 26.9
arahy.Tifrunner.gnm1.ann1.XZ68KB Arachis hypogaea HOM05D000790 ORTHO05D000769 5.9e-08 62.0 160 26.9
Solyc09g011270.4 Solanum lycopersicum HOM05D000790 ORTHO05D000769 5.9e-08 62.0 123 31.7
CsaV3_4G025400 Cucumis sativus L. HOM05D000790 ORTHO05D000769 7.7e-08 61.6 152 30.9
RcHm_v2.0_Chr6g0271941 Rosa chinensis HOM05D000790 ORTHO05D000769 7.7e-08 61.6 140 32.9
MSTRG.5637 Avicennia marina HOM05D000790 ORTHO05D000769 1.0e-07 61.2 168 28.0
Migut.F01291 Erythranthe guttata HOM05D000790 ORTHO05D000769 1.0e-07 61.2 145 26.9
Lj7C563T4 Lonicera japonica HOM05D000125 ORTHO05D000807 1.0e-07 61.2 181 28.7
Sed0003370 Sechium edule HOM05D000790 ORTHO05D000769 1.0e-07 61.2 169 30.8
Medtr1g034960 Medicago truncatula HOM05D000790 ORTHO05D007702 1.3e-07 60.8 178 28.1
MSTRG.5636 Avicennia marina HOM05D000790 ORTHO05D000769 1.7e-07 60.5 168 28.0
Gohir.A11G276500 Gossypium hirsutum HOM05D000768 ORTHO05D009513 1.7e-07 60.5 173 30.1
Psat6g132280 Pisum sativum HOM05D000790 ORTHO05D007702 1.7e-07 60.5 179 27.9
SalBow4G1180 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.7e-07 60.5 114 28.9
Migut.F01298 Erythranthe guttata HOM05D000790 ORTHO05D000769 2.9e-07 59.7 167 26.9
BolC3t13779H Brassica oleracea HOM05D000125 ORTHO05D000120 3.8e-07 59.3 125 31.2
Peaxi162Scf00318g00918 Petunia axillaris HOM05D000790 ORTHO05D000769 5.0e-07 58.9 180 27.8
Thecc.05G032100 Theobroma cacao HOM05D000790 ORTHO05D000769 5.0e-07 58.9 166 25.3
arahy.Tifrunner.gnm1.ann1.RL3IDB Arachis hypogaea HOM05D000790 ORTHO05D007702 6.5e-07 58.5 110 32.7
Hma1.2p1_1345F.1_g277170 Hydrangea macrophylla HOM05D000125 ORTHO05D000807 6.5e-07 58.5 176 26.7
Sed0014886 Sechium edule HOM05D000790 ORTHO05D000769 6.5e-07 58.5 113 31.0
C03p13180 Brassica napus HOM05D000125 ORTHO05D000120 8.5e-07 58.2 125 31.2
HanXRQChr01g0029281 Helianthus annuus HOM05D000790 ORTHO05D000769 8.5e-07 58.2 113 33.6
BraA05t19429Z Brassica rapa HOM05D000125 ORTHO05D000807 1.5e-06 57.4 123 30.1
Haze_04218 Corylus avellana HOM05D000125 ORTHO05D000120 1.9e-06 57.0 92 33.7
MELO3C003163.2 Cucumis melo HOM05D000790 ORTHO05D000769 1.9e-06 57.0 118 33.1
Sabra05G0200400 Salix brachista HOM05D000790 ORTHO05D007702 1.9e-06 57.0 172 27.3
CAN.G637.38 Capsicum annuum HOM05D000125 ORTHO05D000807 2.5e-06 56.6 134 28.4
Migut.F01297 Erythranthe guttata HOM05D000790 ORTHO05D000769 3.2e-06 56.2 164 26.2
Glyma.20G006200 Glycine max HOM05D000790 ORTHO05D007702 3.2e-06 56.2 185 29.2
Phvul.003G008600 Phaseolus vulgaris HOM05D000790 ORTHO05D007702 3.2e-06 56.2 174 28.2
TAR623G1054 Trochodendron aralioides HOM05D000790 ORTHO05D000769 3.2e-06 56.2 127 29.1
Hma1.2p1_0505F.1_g168190 Hydrangea macrophylla HOM05D000125 ORTHO05D000807 5.5e-06 55.5 182 26.9
VMungo1215G3008 Vigna mungo HOM05D000790 ORTHO05D007702 5.5e-06 55.5 174 28.2
Migut.F01299 Erythranthe guttata HOM05D000790 ORTHO05D000769 7.2e-06 55.1 167 26.9
TWI09G1624 Tripterygium wilfordii HOM05D000125 ORTHO05D000807 7.2e-06 55.1 111 29.7
Duzib106G0052 Durio zibethinus HOM05D000125 ORTHO05D000120 9.4e-06 54.7 99 35.4
Glyma.07G159100 Glycine max HOM05D000790 ORTHO05D007702 9.4e-06 54.7 176 28.4
Rhsim03G0009700 Rhododendron simsii HOM05D000125 ORTHO05D000120 9.4e-06 54.7 126 30.2
Sopen01g033400 Solanum pennellii HOM05D000125 ORTHO05D000807 9.4e-06 54.7 116 31.0


User provided reference genes

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