Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G041700 Theobroma cacao HOM05D009017 ORTHO05D010462 4.1e-74 281.2 132 100.0
Thecc.10G042200 Theobroma cacao HOM05D009017 ORTHO05D010462 8.2e-38 160.6 94 78.7
Thecc.10G041900 Theobroma cacao HOM05D009017 ORTHO05D010462 1.2e-28 130.2 70 82.9
Duzib114G0060 Durio zibethinus HOM05D009017 ORTHO05D010462 4.4e-23 111.7 87 57.5
Gohir.D10G228766 Gossypium hirsutum HOM05D009017 ORTHO05D010462 4.5e-20 101.7 79 58.2
Gohir.D10G228733 Gossypium hirsutum HOM05D009017 ORTHO05D010462 7.7e-20 100.9 91 52.7
Gohir.A10G219350 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.9e-18 96.3 99 48.5
Gorai.011G262600 Gossypium raimondii HOM05D009017 ORTHO05D010462 7.2e-18 94.4 91 50.5
Gohir.A05G298250 Gossypium hirsutum HOM05D009017 ORTHO05D010462 9.4e-18 94.0 91 48.4
Gohir.A10G219300 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.2e-17 93.6 91 50.5
Gohir.D10G230025 Gossypium hirsutum HOM05D009017 ORTHO05D010462 4.7e-17 91.7 91 48.4
COL.COLO4_15045 Corchorus olitorius HOM05D009017 ORTHO05D010462 5.2e-16 88.2 92 47.8
Hma1.2p1_0953F.1_g241070 Hydrangea macrophylla HOM05D009017 ORTHO05D010462 4.4e-15 85.1 89 48.3
Gohir.A06G170533 Gossypium hirsutum HOM05D009017 ORTHO05D010462 7.4e-15 84.3 86 46.5
Gohir.A06G176800 Gossypium hirsutum HOM05D009017 ORTHO05D010462 6.3e-14 81.3 95 45.3
Cpa.g.sc1.225 Carica papaya HOM05D009017 ORTHO05D010462 1.1e-13 80.5 75 53.3
Gorai.010G201900 Gossypium raimondii HOM05D009017 ORTHO05D010462 1.4e-13 80.1 85 45.9
Gohir.D06G172800 Gossypium hirsutum HOM05D009017 ORTHO05D010462 2.4e-13 79.3 85 45.9
Actinidia32413 Actinidia chinensis HOM05D009017 ORTHO05D010462 1.2e-12 77.0 77 48.1
Gohir.D06G172750 Gossypium hirsutum HOM05D009017 ORTHO05D010462 1.6e-12 76.6 86 45.3
Gorai.010G201800 Gossypium raimondii HOM05D009017 ORTHO05D010462 1.6e-12 76.6 86 45.3
Phvul.008G010400 Phaseolus vulgaris HOM05D009017 ORTHO05D010462 2.0e-12 76.3 78 47.4
Gohir.D06G172775 Gossypium hirsutum HOM05D009017 ORTHO05D010462 2.9e-11 72.4 95 41.1
VMungo1383G3025 Vigna mungo HOM05D009017 ORTHO05D010462 2.9e-11 72.4 92 43.5
Cpa.g.sc1118.2 Carica papaya HOM05D009017 ORTHO05D010462 1.1e-10 70.5 76 44.7
Atru.chr12.449 Acer truncatum HOM05D010334 ORTHO05D010462 9.4e-10 67.4 76 43.4
VMungo0464G0182 Vigna mungo HOM05D009017 ORTHO05D010462 1.6e-09 66.6 80 43.8
Lj2g0020276 Lotus japonicus HOM05D009017 ORTHO05D010462 3.6e-09 65.5 99 37.4
Psat1g090800 Pisum sativum HOM05D009017 ORTHO05D010462 1.4e-08 63.5 60 50.0
FvH4_7g22495 Fragaria vesca HOM05D045852 ORTHO05D010462 3.0e-08 62.4 95 37.9
Cpa.g.c29560 Carica papaya HOM05D031039 ORTHO05D117232 4.0e-08 62.0 79 34.2
Phvul.004G001100 Phaseolus vulgaris HOM05D009017 ORTHO05D010462 8.8e-08 60.8 76 42.1
PGR142G1311 Punica granatum HOM05D009017 ORTHO05D010462 1.2e-07 60.5 72 41.7
Medtr6g027970 Medicago truncatula HOM05D009017 ORTHO05D010462 1.5e-07 60.1 54 50.0
Thhalv10015565m.g Eutrema salsugineum HOM05D010334 ORTHO05D010462 7.5e-07 57.8 53 50.9
FAN01G1295 Fragaria x ananassa HOM05D045852 ORTHO05D010462 1.7e-06 56.6 105 35.2
Carub.0006s1201 Capsella rubella HOM05D010334 ORTHO05D010462 2.8e-06 55.8 63 41.3
Gohir.A06G173666 Gossypium hirsutum HOM05D009017 ORTHO05D010462 2.8e-06 55.8 61 42.6
Prupe.2G235700 Prunus persica HOM05D009017 ORTHO05D010462 2.8e-06 55.8 72 38.9
Lalb_Chr10g0091611 Lupinus albus HOM05D009017 ORTHO05D010462 4.8e-06 55.1 110 35.5


User provided reference genes

Program Settings