Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 0.0e+00 1358.6 704 100.0
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 0.0e+00 1118.2 706 84.3
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 0.0e+00 1076.6 655 84.9
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 5.1e-304 1047.3 706 79.7
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.8e-301 1038.9 703 79.8
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.4e-298 1029.2 704 79.4
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 7.1e-298 1026.9 697 79.6
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.1e-297 1025.4 697 79.5
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 6.7e-296 1020.4 704 78.7
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 8.7e-296 1020.0 697 79.5
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 4.4e-231 805.1 715 63.1
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 1.4e-229 800.0 710 62.1
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 6.2e-225 784.6 676 64.8
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 1.1e-224 783.9 695 64.6
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 3.1e-224 782.3 700 62.7
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 2.0e-223 779.6 702 61.5
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 5.8e-223 778.1 699 62.1
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.0e-219 767.3 709 62.1
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 1.3e-219 766.9 693 61.6
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 8.6e-219 764.2 661 62.9
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 1.1e-218 763.8 661 63.2
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.9e-218 763.1 654 63.6
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 2.1e-217 759.6 698 61.5
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 6.2e-217 758.1 657 63.3
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 1.8e-216 756.5 720 61.2
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 1.8e-216 756.5 720 61.2
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 8.9e-216 754.2 705 59.7
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 4.9e-214 748.4 699 61.9
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 1.5e-210 736.9 709 58.3
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 6.2e-209 731.5 706 58.9
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.8e-208 729.9 714 60.4
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 5.8e-207 724.9 688 59.7
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 2.9e-206 722.6 711 59.1
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 2.5e-202 709.5 752 54.9
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 2.1e-196 689.9 679 58.3
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 5.1e-195 685.3 713 58.5
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 1.9e-194 683.3 677 56.9
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 9.0e-192 674.5 705 56.3
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 2.6e-191 672.9 710 55.6
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 5.8e-191 671.8 728 54.1
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 2.9e-190 669.5 704 56.5
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 1.1e-189 667.5 708 56.1
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 1.3e-187 660.6 715 54.1
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 3.0e-187 659.4 712 55.6
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 9.6e-186 654.4 668 55.8
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 2.4e-184 649.8 665 55.9
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 9.9e-183 644.4 704 54.4
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.4e-181 640.6 602 57.6
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 1.4e-181 640.6 658 55.3
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.2e-180 637.5 684 54.7
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.3e-179 633.3 715 51.9
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 6.7e-179 631.7 650 54.8
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 6.7e-179 631.7 730 51.6
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 8.7e-179 631.3 641 57.3
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 4.3e-178 629.0 711 53.7
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 4.3e-178 629.0 689 53.3
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 1.3e-177 627.5 707 54.9
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 2.8e-177 626.3 627 57.6
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 8.2e-177 624.8 693 52.7
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.8e-176 623.6 670 53.3
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 3.1e-176 622.9 526 65.4
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 6.9e-176 621.7 701 52.9
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.5e-175 620.5 712 51.8
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 1.7e-174 617.1 723 51.7
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 2.1e-172 610.1 696 52.6
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 3.0e-171 606.3 609 57.5
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 7.4e-170 601.7 679 52.1
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.7e-166 590.5 739 49.0
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 1.1e-165 587.8 699 53.2
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 1.4e-163 580.9 652 54.1
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 3.7e-161 572.8 771 45.7
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.0e-159 567.0 679 50.2
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 2.2e-158 563.5 722 49.2
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 5.5e-157 558.9 585 54.2
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 2.1e-156 557.0 570 56.3
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 3.6e-156 556.2 667 51.6
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 3.3e-154 549.7 585 55.4
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 1.3e-153 547.7 585 54.7
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 3.7e-153 546.2 585 54.5
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 1.1e-152 544.7 715 49.2
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 4.1e-152 542.7 702 50.0
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 3.5e-151 539.7 673 49.9
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 8.5e-150 535.0 582 54.1
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 3.7e-145 519.6 706 47.3
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 4.8e-145 519.2 674 48.8
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.2e-141 506.5 582 51.4
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 5.2e-139 499.2 676 48.4
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 3.5e-135 486.5 649 47.8
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 5.0e-134 482.6 663 47.5
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 1.9e-133 480.7 722 45.2
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 1.6e-132 477.6 622 49.0
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 1.8e-131 474.2 737 45.5
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 2.3e-131 473.8 648 47.8
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 1.2e-130 471.5 684 45.3
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 4.2e-125 453.0 632 47.5
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 8.0e-124 448.7 567 49.0
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 8.0e-124 448.7 567 49.0
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 5.2e-123 446.0 766 43.3
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 7.5e-122 442.2 454 58.4
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 1.7e-121 441.0 507 51.5
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 3.7e-121 439.9 674 44.7
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 8.0e-116 422.2 501 52.3
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 3.1e-115 420.2 720 42.1
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 5.2e-115 419.5 622 44.4
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 7.5e-114 415.6 493 50.3
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 1.4e-107 394.8 644 42.7
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 1.8e-107 394.4 567 43.9
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 2.6e-106 390.6 702 41.3
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 2.2e-105 387.5 618 44.2
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 3.5e-103 380.2 555 44.9
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 8.6e-102 375.6 566 44.7
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 8.4e-89 332.4 483 45.5
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 1.2e-87 328.6 535 42.2
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 2.7e-87 327.4 610 41.8
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.3e-86 325.1 288 59.0
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 1.6e-79 301.6 192 75.5
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 3.9e-70 270.4 258 55.0
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 4.5e-66 256.9 267 51.3
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 5.5e-56 223.4 205 60.0
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 3.3e-53 214.2 168 66.7
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 2.2e-49 201.4 215 47.0
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 2.9e-49 201.1 327 40.7
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 2.5e-48 198.0 442 33.7
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 3.2e-48 197.6 170 65.9
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 9.4e-48 196.1 263 46.4
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 1.5e-45 188.7 138 68.1
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 1.7e-44 185.3 381 33.9
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 5.0e-41 173.7 230 47.4
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 4.2e-40 170.6 119 68.1
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 6.1e-39 166.8 132 65.2
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 1.8e-38 165.2 169 55.6
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 3.1e-35 154.5 170 54.7
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 1.1e-32 146.0 151 53.0
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 2.3e-30 138.3 409 33.5
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 9.1e-27 126.3 126 57.9
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 4.5e-26 124.0 87 71.3
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 4.0e-22 110.9 74 63.5
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.8e-19 102.1 106 43.4
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.0e-18 98.6 129 46.5
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 1.5e-16 92.4 73 60.3
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 5.2e-14 84.0 59 69.5
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 4.4e-13 80.9 72 54.2
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 1.7e-12 79.0 65 63.1
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 1.8e-11 75.5 136 41.9
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 1.2e-10 72.8 133 39.8
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 1.1e-08 66.2 42 69.0
Oeu061605.1 Olea europaea HOM05D004806 ORTHO05D005397 3.3e-08 64.7 55 50.9
SalBow2G3552 Salvia bowleyana HOM05D034888 ORTHO05D005397 3.3e-08 64.7 43 69.8
Ah.05g175410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 4.3e-08 64.3 55 58.2
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 1.2e-07 62.8 241 28.2
MD12G1168400 Malus domestica HOM05D004806 ORTHO05D005397 6.1e-07 60.5 29 93.1


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