Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G023900 Theobroma cacao HOM05D000149 ORTHO05D000076 8.5e-93 343.6 165 100.0
Thecc.10G024300 Theobroma cacao HOM05D000149 ORTHO05D000076 6.0e-14 81.6 46 80.4
Thecc.10G024700 Theobroma cacao HOM05D000149 ORTHO05D000076 6.0e-14 81.6 46 80.4
Thecc.10G024800 Theobroma cacao HOM05D000149 ORTHO05D000076 6.0e-14 81.6 46 80.4
Thecc.10G025100 Theobroma cacao HOM05D000149 ORTHO05D000076 6.0e-14 81.6 46 80.4
Thecc.05G279700 Theobroma cacao HOM05D000149 ORTHO05D000076 1.9e-12 76.6 46 78.3
Thecc.10G024000 Theobroma cacao HOM05D000149 ORTHO05D000076 2.5e-12 76.3 46 73.9
Thecc.10G024200 Theobroma cacao HOM05D000149 ORTHO05D000076 2.5e-12 76.3 46 73.9
COL.COLO4_25648 Corchorus olitorius HOM05D000149 ORTHO05D000076 2.8e-11 72.8 81 50.6
Duzib114G1025 Durio zibethinus HOM05D000149 ORTHO05D000076 1.2e-09 67.4 70 54.3
Thecc.10G023800 Theobroma cacao HOM05D000149 ORTHO05D000076 1.5e-09 67.0 69 53.6
Thecc.10G024500 Theobroma cacao HOM05D000149 ORTHO05D000076 2.0e-09 66.6 69 53.6
Thecc.10G024900 Theobroma cacao HOM05D000149 ORTHO05D000076 2.0e-09 66.6 69 53.6
COL.COLO4_25641 Corchorus olitorius HOM05D000149 ORTHO05D000076 5.8e-09 65.1 86 53.5
Atru.chr12.229 Acer truncatum HOM05D000149 ORTHO05D000076 7.6e-09 64.7 46 60.9
COL.COLO4_25645 Corchorus olitorius HOM05D000149 ORTHO05D000076 1.7e-08 63.5 86 52.3
COL.COLO4_25647 Corchorus olitorius HOM05D000149 ORTHO05D000076 1.7e-08 63.5 58 62.1
PGR044G1497 Punica granatum HOM05D000149 ORTHO05D000076 1.7e-08 63.5 120 35.0
Atru.chr12.231 Acer truncatum HOM05D000149 ORTHO05D000076 2.9e-08 62.8 46 58.7
COL.COLO4_25642 Corchorus olitorius HOM05D000149 ORTHO05D000076 3.8e-08 62.4 86 52.3
Dinv34416 Davidia involucrata HOM05D000149 ORTHO05D000076 3.8e-08 62.4 75 44.0
PGR044G0159 Punica granatum HOM05D000149 ORTHO05D000076 4.9e-08 62.0 66 48.5
COL.COLO4_25644 Corchorus olitorius HOM05D000149 ORTHO05D000076 6.5e-08 61.6 45 64.4
COL.COLO4_25646 Corchorus olitorius HOM05D000149 ORTHO05D000076 1.9e-07 60.1 56 55.4
PGR044G0376 Punica granatum HOM05D000149 ORTHO05D000076 3.2e-07 59.3 52 48.1
Sc14g0005260 Simmondsia chinensis HOM05D000149 ORTHO05D000076 7.1e-07 58.2 79 38.0
Rhsim03G0141100 Rhododendron simsii HOM05D000149 ORTHO05D000076 1.2e-06 57.4 43 60.5
Atru.chr1.1821 Acer truncatum HOM05D000149 ORTHO05D000076 3.5e-06 55.8 76 40.8
COL.COLO4_25649 Corchorus olitorius HOM05D000149 ORTHO05D000076 3.5e-06 55.8 45 57.8


User provided reference genes

Program Settings