Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 6.6e-38 160.2 82 100.0
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 2.6e-26 121.7 82 74.4
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 5.8e-26 120.6 82 75.6
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.3e-25 119.4 82 73.2
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.2e-25 118.6 82 70.7
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.2e-25 118.6 82 70.7
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 2.9e-25 118.2 82 72.0
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.8e-25 117.9 82 70.7
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 3.8e-25 117.9 80 73.8
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.9e-25 117.5 82 69.5
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.9e-25 117.5 82 70.7
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.1e-24 116.3 82 69.5
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.1e-24 116.3 82 69.5
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.9e-24 115.5 82 69.5
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 3.2e-24 114.8 82 70.7
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 3.2e-24 114.8 82 72.0
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 4.2e-24 114.4 82 72.0
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 5.4e-24 114.0 82 70.7
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 1.2e-23 112.8 82 68.3
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 1.6e-23 112.5 82 70.7
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 3.5e-23 111.3 82 70.7
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 1.3e-22 109.4 81 65.4
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 3.0e-22 108.2 82 65.9
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 8.7e-22 106.7 82 64.6
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 1.5e-21 105.9 82 65.9
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 1.9e-21 105.5 80 66.2
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 1.9e-21 105.5 81 66.7
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 2.5e-21 105.1 82 63.4
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 4.3e-21 104.4 82 65.9
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 4.3e-21 104.4 82 65.9
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 4.3e-21 104.4 82 65.9
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.3e-21 104.4 75 69.3
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 4.3e-21 104.4 80 62.5
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 5.6e-21 104.0 82 63.4
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 5.6e-21 104.0 82 63.4
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 5.6e-21 104.0 82 65.9
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 5.6e-21 104.0 80 65.0
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 5.6e-21 104.0 82 63.4
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 7.4e-21 103.6 82 65.9
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 9.6e-21 103.2 82 62.2
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 1.3e-20 102.8 82 62.2
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 1.3e-20 102.8 80 62.5
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 1.3e-20 102.8 82 62.2
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 1.6e-20 102.4 82 64.6
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 2.1e-20 102.1 82 64.6
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 2.1e-20 102.1 82 64.6
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 2.1e-20 102.1 82 64.6
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 2.1e-20 102.1 82 64.6
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 2.1e-20 102.1 82 64.6
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 2.1e-20 102.1 80 66.2
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 2.1e-20 102.1 81 66.7
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 2.8e-20 101.7 80 61.2
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 3.7e-20 101.3 80 62.5
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 3.7e-20 101.3 84 59.5
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 8.1e-20 100.1 82 59.8
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 1.4e-19 99.4 82 61.0
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 1.4e-19 99.4 76 65.8
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 1.4e-19 99.4 80 62.5
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 1.8e-19 99.0 90 62.2
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 3.1e-19 98.2 82 61.0
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 5.3e-19 97.4 85 65.9
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 5.3e-19 97.4 80 60.0
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 9.0e-19 96.7 80 61.2
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 1.2e-18 96.3 77 63.6
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 2.0e-18 95.5 82 57.3
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 2.0e-18 95.5 88 60.2
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 2.6e-18 95.1 80 60.0
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 2.6e-18 95.1 80 60.0
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 3.4e-18 94.7 81 58.0
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 5.8e-18 94.0 81 54.3
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 5.8e-18 94.0 80 58.8
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 7.6e-18 93.6 82 53.7
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 7.6e-18 93.6 82 56.1
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 1.0e-17 93.2 80 56.2
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 1.3e-17 92.8 64 70.3
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 8.4e-17 90.1 82 59.8
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 1.4e-16 89.4 82 57.3
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 1.4e-16 89.4 83 60.2
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 1.9e-16 89.0 69 63.8
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 2.5e-16 88.6 81 56.8
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 7.1e-16 87.0 84 56.0
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 1.2e-15 86.3 89 50.6
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 1.6e-15 85.9 84 57.1
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 3.5e-15 84.7 89 50.6
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 3.5e-15 84.7 82 52.4
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 6.0e-15 84.0 85 56.5
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 6.0e-15 84.0 85 56.5
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 1.8e-14 82.4 84 56.0
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 3.0e-14 81.6 83 53.0
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 8.7e-14 80.1 84 54.8
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 8.7e-14 80.1 83 53.0
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 1.1e-13 79.7 84 54.8
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 3.3e-13 78.2 67 59.7
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 8.2e-12 73.6 81 51.9
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 1.1e-11 73.2 90 50.0
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 2.0e-10 68.9 82 52.4
Duzib114G0968 Durio zibethinus HOM05D000021 ORTHO05D000010 2.6e-10 68.6 51 72.5
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 2.9e-09 65.1 91 44.0
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 5.5e-08 60.8 99 41.4
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 1.8e-06 55.8 47 51.1


User provided reference genes

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