Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G017700 Theobroma cacao HOM05D009631 ORTHO05D011824 6.2e-250 867.1 461 100.0
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 3.7e-101 372.9 228 87.3
Thecc.06G016000 Theobroma cacao HOM05D009631 ORTHO05D011824 7.7e-83 312.0 278 65.1
Thecc.10G017600 Theobroma cacao HOM05D009631 ORTHO05D011824 1.1e-73 281.6 219 76.3
Thecc.10G017000 Theobroma cacao HOM05D009631 ORTHO05D011824 9.8e-54 215.3 187 65.8
Gohir.D10G248725 Gossypium hirsutum HOM05D009631 ORTHO05D011824 1.8e-47 194.5 283 45.2
Gohir.D10G248750 Gossypium hirsutum HOM05D009631 ORTHO05D011824 6.8e-47 192.6 273 45.8
Gorai.011G287300 Gossypium raimondii HOM05D009631 ORTHO05D011824 9.8e-46 188.7 280 46.8
Gohir.A10G235933 Gossypium hirsutum HOM05D009631 ORTHO05D011824 1.3e-45 188.3 283 44.9
Gorai.011G288800 Gossypium raimondii HOM05D009631 ORTHO05D011824 2.7e-43 180.6 272 44.5
Thecc.10G017200 Theobroma cacao HOM05D009631 ORTHO05D011824 1.0e-42 178.7 142 69.7
Gorai.011G287200 Gossypium raimondii HOM05D009631 ORTHO05D011824 8.6e-42 175.6 272 45.6
Gorai.011G287500 Gossypium raimondii HOM05D009631 ORTHO05D011824 8.6e-42 175.6 266 47.0
Gohir.A10G236950 Gossypium hirsutum HOM05D009631 ORTHO05D011824 4.3e-41 173.3 272 43.0
Gohir.D10G235408 Gossypium hirsutum HOM05D009631 ORTHO05D011824 2.6e-38 164.1 276 43.5
Gorai.011G269000 Gossypium raimondii HOM05D009631 ORTHO05D011824 2.6e-38 164.1 276 42.8
Gorai.011G287100 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.7e-37 161.4 278 45.3
Gorai.011G287400 Gossypium raimondii HOM05D009631 ORTHO05D011824 4.1e-36 156.8 280 44.3
Gorai.011G287000 Gossypium raimondii HOM05D009631 ORTHO05D011824 5.0e-34 149.8 246 45.9
Gohir.A10G235999 Gossypium hirsutum HOM05D009631 ORTHO05D011824 6.4e-29 132.9 161 45.3
Gohir.D10G101501 Gossypium hirsutum HOM05D009631 ORTHO05D011824 9.5e-25 119.0 142 45.8
Gorai.011G286800 Gossypium raimondii HOM05D009631 ORTHO05D011824 3.2e-20 104.0 151 49.7
Gorai.011G286900 Gossypium raimondii HOM05D009631 ORTHO05D011824 9.2e-20 102.4 149 39.6
Gohir.A10G235966 Gossypium hirsutum HOM05D009631 ORTHO05D011824 6.6e-18 96.3 151 47.0
Gorai.011G288700 Gossypium raimondii HOM05D009631 ORTHO05D011824 2.5e-17 94.4 101 47.5
Gohir.D10G101450 Gossypium hirsutum HOM05D009631 ORTHO05D011824 3.1e-15 87.4 139 44.6
Gorai.011G111200 Gossypium raimondii HOM05D009631 ORTHO05D011824 3.1e-15 87.4 146 43.8
Gohir.A10G236065 Gossypium hirsutum HOM05D009631 ORTHO05D011824 1.3e-10 72.0 92 46.7
Potri.001G407500 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.3e-10 71.2 144 34.7
Potri.001G407401 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.0e-10 70.9 144 34.7
Potri.006G095200 Populus trichocarpa HOM05D008789 ORTHO05D010785 8.7e-10 69.3 142 35.2
Manes.10G145500 Manihot esculenta HOM05D008789 ORTHO05D010785 2.5e-09 67.8 111 36.0
Potri.014G065600 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.3e-09 67.4 134 31.3
Potri.014G061800 Populus trichocarpa HOM05D008789 ORTHO05D010785 7.3e-09 66.2 139 30.2
Potri.014G065250 Populus trichocarpa HOM05D008789 ORTHO05D010785 9.6e-09 65.9 133 30.8
Potri.014G065900 Populus trichocarpa HOM05D008789 ORTHO05D010785 6.2e-08 63.2 134 30.6
Sabra16G0268800 Salix brachista HOM05D008789 ORTHO05D010785 1.1e-07 62.4 140 35.0
Sabra16G0271000 Salix brachista HOM05D008789 ORTHO05D010785 1.1e-07 62.4 140 35.0
Ciclev10013523m.g Citrus clementina HOM05D019503 ORTHO05D010785 1.4e-07 62.0 130 37.7
Sabra16G0269400 Salix brachista HOM05D008789 ORTHO05D010785 3.1e-07 60.8 144 32.6
Sabra16G0267600 Salix brachista HOM05D008789 ORTHO05D010785 5.2e-07 60.1 144 32.6
Potri.014G061500 Populus trichocarpa HOM05D008789 ORTHO05D010785 6.9e-07 59.7 114 31.6
Potri.014G065100 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.2e-06 58.9 126 28.6
Prupe.3G260600 Prunus persica HOM05D015643 ORTHO05D014629 1.2e-06 58.9 120 38.3
Gorai.002G089800 Gossypium raimondii HOM05D019273 ORTHO05D020506 2.0e-06 58.2 106 36.8
COL.COLO4_09669 Corchorus olitorius HOM05D019273 ORTHO05D020506 4.4e-06 57.0 139 33.1
MD09G1046300 Malus domestica HOM05D008902 ORTHO05D011216 5.8e-06 56.6 100 37.0
Potri.006G095100 Populus trichocarpa HOM05D008789 ORTHO05D010785 7.6e-06 56.2 132 31.1
Manes.05G049300 Manihot esculenta HOM05D008789 ORTHO05D010785 9.9e-06 55.8 107 37.4


User provided reference genes

Program Settings