Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G017200 Theobroma cacao HOM05D009631 ORTHO05D011824 6.0e-86 320.9 168 100.0
Thecc.10G017000 Theobroma cacao HOM05D009631 ORTHO05D011824 2.1e-70 269.2 150 94.0
Thecc.10G017700 Theobroma cacao HOM05D009631 ORTHO05D011824 1.3e-43 180.3 142 69.7
Thecc.06G016000 Theobroma cacao HOM05D009631 ORTHO05D011824 1.3e-40 170.2 148 65.5
Gohir.A10G235999 Gossypium hirsutum HOM05D009631 ORTHO05D011824 9.8e-28 127.5 153 47.7
Gohir.D10G248750 Gossypium hirsutum HOM05D009631 ORTHO05D011824 1.3e-27 127.1 148 48.0
Gohir.A10G236950 Gossypium hirsutum HOM05D009631 ORTHO05D011824 2.4e-26 122.9 151 46.4
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 3.1e-26 122.5 99 69.7
Gorai.011G288800 Gossypium raimondii HOM05D009631 ORTHO05D011824 4.5e-25 118.6 156 44.9
Gohir.A10G235933 Gossypium hirsutum HOM05D009631 ORTHO05D011824 5.9e-25 118.2 146 47.9
Gohir.D10G248725 Gossypium hirsutum HOM05D009631 ORTHO05D011824 6.5e-24 114.8 150 46.7
Gohir.D10G101501 Gossypium hirsutum HOM05D009631 ORTHO05D011824 4.2e-23 112.1 155 45.2
Thecc.10G017600 Theobroma cacao HOM05D009631 ORTHO05D011824 4.7e-22 108.6 115 57.4
Gohir.D10G235408 Gossypium hirsutum HOM05D009631 ORTHO05D011824 4.0e-21 105.5 156 42.9
Gorai.011G287300 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.2e-20 104.0 144 45.1
Gorai.011G287200 Gossypium raimondii HOM05D009631 ORTHO05D011824 4.4e-20 102.1 139 44.6
Gorai.011G287500 Gossypium raimondii HOM05D009631 ORTHO05D011824 4.4e-20 102.1 122 49.2
Gorai.011G269000 Gossypium raimondii HOM05D009631 ORTHO05D011824 5.7e-20 101.7 156 41.0
Gorai.011G286900 Gossypium raimondii HOM05D009631 ORTHO05D011824 5.4e-18 95.1 153 39.9
Gorai.011G287400 Gossypium raimondii HOM05D009631 ORTHO05D011824 5.4e-18 95.1 139 44.6
Gorai.011G287100 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.7e-16 90.1 139 44.6
Gorai.011G287000 Gossypium raimondii HOM05D009631 ORTHO05D011824 1.9e-15 86.7 112 45.5
Gorai.011G288700 Gossypium raimondii HOM05D009631 ORTHO05D011824 5.6e-15 85.1 111 45.0
Gorai.011G286800 Gossypium raimondii HOM05D009631 ORTHO05D011824 4.7e-14 82.0 143 39.9
Gohir.D10G101450 Gossypium hirsutum HOM05D009631 ORTHO05D011824 8.9e-13 77.8 134 40.3
Gorai.011G111200 Gossypium raimondii HOM05D009631 ORTHO05D011824 2.6e-12 76.3 140 38.6
Gohir.A10G235966 Gossypium hirsutum HOM05D009631 ORTHO05D011824 4.4e-12 75.5 143 37.8
Manes.10G145500 Manihot esculenta HOM05D008789 ORTHO05D010785 1.1e-10 70.9 125 32.8
Potri.006G095200 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.4e-10 70.5 134 32.1
Gohir.A10G236065 Gossypium hirsutum HOM05D009631 ORTHO05D011824 1.8e-10 70.1 124 37.9
QL07p007766 Quercus lobata HOM05D014023 ORTHO05D011719 2.4e-10 69.7 116 37.1
Potri.006G095100 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.2e-10 69.3 137 31.4
Potri.001G407500 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.3e-08 63.9 137 30.7
Potri.014G061800 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.3e-08 63.9 122 30.3
Potri.001G407401 Populus trichocarpa HOM05D008789 ORTHO05D010785 5.0e-08 62.0 115 33.0
Potri.014G065250 Populus trichocarpa HOM05D008789 ORTHO05D010785 5.0e-08 62.0 122 29.5
Potri.014G065700 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.1e-07 60.8 117 32.5
COL.COLO4_09669 Corchorus olitorius HOM05D019273 ORTHO05D020506 1.5e-07 60.5 143 33.6
Potri.014G065600 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.5e-07 60.5 122 29.5
Manes.05G049300 Manihot esculenta HOM05D008789 ORTHO05D010785 2.5e-07 59.7 121 34.7
Sabra16G0269400 Salix brachista HOM05D008789 ORTHO05D010785 2.5e-07 59.7 137 31.4
Sabra16G0267600 Salix brachista HOM05D008789 ORTHO05D010785 4.3e-07 58.9 137 32.1
Sabra13G0031200 Salix brachista HOM05D008789 ORTHO05D010785 5.6e-07 58.5 122 30.3
Potri.014G065900 Populus trichocarpa HOM05D008789 ORTHO05D010785 7.3e-07 58.2 122 28.7
Sabra16G0269100 Salix brachista HOM05D008789 ORTHO05D010785 7.3e-07 58.2 117 32.5
Sabra16G0267200 Salix brachista HOM05D008789 ORTHO05D010785 9.5e-07 57.8 117 32.5
Sabra16G0268800 Salix brachista HOM05D008789 ORTHO05D010785 9.5e-07 57.8 135 30.4
Sabra16G0271000 Salix brachista HOM05D008789 ORTHO05D010785 9.5e-07 57.8 135 30.4
Potri.014G061500 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.1e-06 56.6 114 29.8
Thecc.09G077200 Theobroma cacao HOM05D014972 ORTHO05D011719 2.1e-06 56.6 132 37.9
Ciclev10013523m.g Citrus clementina HOM05D019503 ORTHO05D010785 2.8e-06 56.2 133 33.1
Prupe.3G260600 Prunus persica HOM05D015643 ORTHO05D014629 2.8e-06 56.2 99 39.4
Sabra14G0045300 Salix brachista HOM05D008789 ORTHO05D010785 2.8e-06 56.2 117 29.1
FAN26G3248 Fragaria x ananassa HOM05D015643 ORTHO05D014629 3.6e-06 55.8 106 34.9
FvH4_1g20722 Fragaria vesca HOM05D015643 ORTHO05D014629 6.2e-06 55.1 106 34.9
Sabra13G0031000 Salix brachista HOM05D008789 ORTHO05D010785 6.2e-06 55.1 114 29.8
COL.COLO4_09670 Corchorus olitorius HOM05D019273 ORTHO05D020506 8.0e-06 54.7 119 34.5
Potri.014G065100 Populus trichocarpa HOM05D008789 ORTHO05D010785 8.0e-06 54.7 122 27.0


User provided reference genes

Program Settings