Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G016300 Theobroma cacao HOM05D000212 ORTHO05D002824 5.2e-60 234.2 118 100.0
Thecc.10G011400 Theobroma cacao HOM05D000212 ORTHO05D002824 3.8e-26 121.7 80 81.2
Cpa.g.sc19.136 Carica papaya HOM05D000212 ORTHO05D002824 5.6e-22 107.8 80 72.5
COL.COLO4_25782 Corchorus olitorius HOM05D000212 ORTHO05D002824 1.1e-20 103.6 81 72.8
Manes.07G134400 Manihot esculenta HOM05D000212 ORTHO05D002824 4.0e-20 101.7 80 68.8
Ciclev10031760m.g Citrus clementina HOM05D000212 ORTHO05D002824 9.9e-19 97.1 80 65.0
QL08p063669 Quercus lobata HOM05D000212 ORTHO05D002824 1.7e-18 96.3 80 63.8
Potri.010G184700 Populus trichocarpa HOM05D000212 ORTHO05D002824 1.4e-17 93.2 80 65.0
CiPaw.02G195300 Carya illinoinensis HOM05D000212 ORTHO05D002824 1.2e-16 90.1 80 63.8
Prupe.2G255300 Prunus persica HOM05D000212 ORTHO05D002824 2.7e-16 89.0 82 65.9
Atru.chr12.73 Acer truncatum HOM05D000212 ORTHO05D002824 3.5e-16 88.6 80 61.2
Sabra10G0141900 Salix brachista HOM05D000212 ORTHO05D002824 4.6e-16 88.2 80 62.5
MD07G1226300 Malus domestica HOM05D000212 ORTHO05D002824 1.0e-15 87.0 81 63.0
Haze_17268 Corylus avellana HOM05D000212 ORTHO05D002824 2.5e-14 82.4 80 53.8
Rhsim03G0146300 Rhododendron simsii HOM05D000212 ORTHO05D002824 5.6e-14 81.3 74 60.8
CANSAT56G2994 Cannabis sativa HOM05D000212 ORTHO05D002824 9.6e-14 80.5 79 59.5
Dinv21771 Davidia involucrata HOM05D000212 ORTHO05D002824 9.6e-14 80.5 74 60.8
Glyma.02G263300 Glycine max HOM05D000212 ORTHO05D002824 9.6e-14 80.5 80 57.5
Glyma.15G217200 Glycine max HOM05D000212 ORTHO05D002824 1.3e-13 80.1 80 56.2
PGSC0003DMG401020596 Solanum tuberosum HOM05D000212 ORTHO05D002824 2.8e-13 79.0 73 58.9
TAR633G0054 Trochodendron aralioides HOM05D000212 ORTHO05D002824 4.8e-13 78.2 72 59.7
Dinv10590 Davidia involucrata HOM05D000212 ORTHO05D002824 6.2e-13 77.8 74 59.5
Solyc03g095820.4 Solanum lycopersicum HOM05D000212 ORTHO05D002824 6.2e-13 77.8 68 60.3
Sopen03g025790 Solanum pennellii HOM05D000212 ORTHO05D002824 6.2e-13 77.8 68 60.3
VMungo0647G0639 Vigna mungo HOM05D000212 ORTHO05D002824 1.1e-12 77.0 80 53.8
Actinidia33911 Actinidia chinensis HOM05D000212 ORTHO05D002824 1.4e-12 76.6 75 57.3
GSVIVG01032761001 Vitis vinifera HOM05D000212 ORTHO05D002824 4.0e-12 75.1 74 58.1
CANSAT56G4403 Cannabis sativa HOM05D000212 ORTHO05D002824 1.2e-11 73.6 79 57.0
Cc02_g06080 Coffea canephora HOM05D000212 ORTHO05D002824 1.1e-09 67.0 73 56.2
MBI08_g37820_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D002824 3.5e-08 62.0 76 48.7
MBI03_g17857_MAGBIO Magnolia biondii HOM05D000212 ORTHO05D002824 5.1e-07 58.2 72 45.8
ATR0180G011 Amborella trichopoda HOM05D000212 ORTHO05D002824 8.7e-07 57.4 75 46.7
TWI73G0570 Tripterygium wilfordii HOM05D000212 ORTHO05D002824 1.9e-06 56.2 73 50.7
TAR625G0660 Trochodendron aralioides HOM05D000212 ORTHO05D002824 4.3e-06 55.1 68 50.0
arahy.Tifrunner.gnm1.ann1.08076P Arachis hypogaea HOM05D000212 ORTHO05D002824 7.4e-06 54.3 78 44.9


User provided reference genes

Program Settings