Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 3.1e-134 481.9 255 100.0
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 3.5e-101 372.1 255 81.2
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 4.8e-87 325.1 256 73.0
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 7.0e-86 321.2 256 72.3
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.6e-85 320.1 256 72.3
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 2.8e-79 299.3 257 65.8
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.8e-78 296.6 257 62.6
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 4.1e-78 295.4 256 64.1
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 5.0e-76 288.5 256 64.1
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 2.1e-74 283.1 257 62.6
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 5.7e-72 275.0 257 63.0
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 1.8e-70 270.0 257 61.5
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 7.0e-70 268.1 257 61.5
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 2.0e-69 266.5 258 61.6
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 3.5e-69 265.8 257 58.0
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 2.9e-68 262.7 256 62.1
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 1.5e-67 260.4 257 57.6
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 1.9e-67 260.0 243 61.3
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 9.5e-67 257.7 257 59.1
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 1.2e-66 257.3 241 61.0
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 4.7e-66 255.4 258 58.5
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 1.7e-63 246.9 257 57.2
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 6.4e-63 245.0 254 57.9
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 3.5e-61 239.2 246 58.1
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 4.6e-61 238.8 259 55.6
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 6.0e-61 238.4 260 58.1
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 7.8e-61 238.0 258 57.4
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.0e-60 237.7 264 55.7
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.0e-60 237.7 259 55.2
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.0e-60 237.7 259 55.2
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.0e-60 237.7 259 54.8
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 1.7e-60 236.9 260 56.2
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 2.3e-60 236.5 263 57.4
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 3.9e-60 235.7 258 55.0
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 5.0e-60 235.3 257 55.6
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 1.1e-59 234.2 242 57.0
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.5e-59 233.8 260 55.0
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 1.2e-58 230.7 257 54.9
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 8.1e-58 228.0 253 55.3
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 1.4e-57 227.3 261 55.2
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.3e-57 226.5 250 54.8
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 8.9e-57 224.6 255 54.5
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 1.5e-56 223.8 249 54.6
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 4.4e-56 222.2 262 55.0
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 7.5e-56 221.5 261 56.3
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 2.9e-55 219.5 259 52.5
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 4.9e-55 218.8 262 54.6
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 5.4e-54 215.3 259 51.0
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 7.1e-54 214.9 212 58.0
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 6.0e-53 211.8 245 53.1
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 7.8e-53 211.5 260 50.8
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 6.6e-52 208.4 211 56.9
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 1.1e-51 207.6 205 58.5
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 2.5e-51 206.5 258 51.6
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 5.6e-51 205.3 264 51.5
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 9.5e-51 204.5 242 50.8
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 9.5e-51 204.5 241 51.9
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.2e-50 204.1 258 50.4
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.8e-50 203.0 161 72.0
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 2.3e-49 199.9 259 51.4
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 4.0e-49 199.1 255 47.1
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 6.8e-49 198.4 258 49.6
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 9.9e-48 194.5 264 48.5
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 1.7e-47 193.7 234 55.1
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 6.4e-47 191.8 219 54.3
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 1.9e-46 190.3 237 53.2
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 4.1e-46 189.1 255 46.7
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 7.1e-46 188.3 265 49.4
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 2.1e-45 186.8 224 53.6
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 2.1e-45 186.8 146 70.5
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 6.0e-45 185.3 212 54.2
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 1.7e-44 183.7 255 46.3
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 3.3e-43 179.5 263 46.8
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 3.6e-42 176.0 141 69.5
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 4.4e-40 169.1 256 46.5
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 7.6e-40 168.3 258 41.5
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.7e-39 167.2 261 46.4
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 2.9e-39 166.4 260 46.2
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.8e-39 166.0 105 80.0
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 3.8e-39 166.0 105 80.0
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 8.4e-39 164.9 175 56.6
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 2.4e-38 163.3 243 44.9
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 3.2e-38 162.9 157 58.6
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 9.3e-38 161.4 165 57.6
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 1.2e-37 161.0 154 59.1
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 1.3e-36 157.5 154 57.8
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 1.3e-36 157.5 143 58.7
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 2.3e-36 156.8 148 61.5
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 2.3e-36 156.8 153 58.8
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 6.6e-36 155.2 154 57.8
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 8.7e-36 154.8 141 60.3
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 8.7e-36 154.8 141 60.3
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 1.9e-35 153.7 183 51.9
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 2.5e-35 153.3 141 59.6
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 3.3e-35 152.9 116 67.2
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 3.3e-35 152.9 116 67.2
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 3.3e-35 152.9 116 67.2
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 3.3e-35 152.9 116 67.2
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 4.8e-34 149.1 134 64.9
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 6.2e-34 148.7 207 49.3
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 1.1e-33 147.9 146 56.2
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 1.1e-33 147.9 184 50.5
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 3.8e-31 139.4 163 53.4
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 4.6e-29 132.5 139 59.0
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 4.9e-23 112.5 83 66.3
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 1.1e-22 111.3 142 50.0
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 3.9e-20 102.8 221 36.7
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 3.3e-19 99.8 220 37.3
Lj8C64T12 Lonicera japonica HOM05D007292 ORTHO05D009084 1.3e-15 87.8 177 40.1
AagrBONN_evm.TU.Sc2ySwM_344.666 Anthoceros agrestis HOM05D007292 ORTHO05D009084 2.0e-08 63.9 135 36.3
Mapoly0147s0009 Marchantia polymorpha HOM05D007292 ORTHO05D009084 2.5e-06 57.0 86 37.2
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 4.2e-06 56.2 55 54.5


User provided reference genes

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