Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 2.2e-128 462.2 221 100.0
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 3.9e-109 398.3 227 86.8
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 5.1e-93 344.7 187 88.2
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 5.1e-93 344.7 190 86.3
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 2.5e-92 342.4 199 82.9
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 2.8e-91 339.0 209 79.9
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 4.8e-91 338.2 227 74.0
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 8.2e-91 337.4 220 76.4
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.1e-90 337.0 194 83.5
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.4e-90 336.7 194 83.5
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 1.4e-90 336.7 226 73.9
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 3.1e-90 335.5 201 80.6
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 3.1e-90 335.5 184 85.3
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 4.1e-90 335.1 177 89.3
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 5.3e-90 334.7 171 91.8
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 5.3e-90 334.7 227 73.1
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 1.2e-89 333.6 196 82.7
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 2.0e-89 332.8 175 89.1
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 2.0e-89 332.8 180 86.1
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 3.4e-89 332.0 224 73.2
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 4.5e-89 331.6 187 85.6
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 5.9e-89 331.3 184 84.8
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 1.0e-88 330.5 186 83.3
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 1.0e-88 330.5 200 78.0
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 1.0e-88 330.5 177 87.6
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 1.0e-88 330.5 177 87.6
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 1.7e-88 329.7 188 82.4
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 2.2e-88 329.3 177 87.6
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.2e-88 329.3 224 73.2
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 2.2e-88 329.3 172 88.4
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 2.2e-88 329.3 178 85.4
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.9e-88 328.9 224 73.7
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 3.8e-88 328.6 176 88.1
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 3.8e-88 328.6 181 87.8
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 5.0e-88 328.2 224 72.8
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 6.5e-88 327.8 188 81.9
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 1.1e-87 327.0 187 82.4
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 1.1e-87 327.0 178 85.4
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 4.2e-87 325.1 187 82.4
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 9.3e-87 323.9 214 72.0
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 1.2e-86 323.6 219 72.1
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.2e-86 323.6 194 78.9
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.6e-86 323.2 199 77.4
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 2.7e-86 322.4 185 81.6
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 7.9e-86 320.9 190 78.4
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 1.0e-85 320.5 163 89.6
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 1.3e-85 320.1 188 80.9
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 3.0e-85 318.9 217 71.4
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 3.9e-85 318.5 187 81.3
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 5.1e-85 318.2 180 81.7
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 5.1e-85 318.2 189 78.8
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 1.9e-84 316.2 192 76.6
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 1.9e-84 316.2 173 86.1
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 2.5e-84 315.8 173 83.8
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.5e-84 315.8 176 83.5
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 4.3e-84 315.1 181 81.2
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 4.3e-84 315.1 180 81.1
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 5.7e-84 314.7 192 79.7
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 7.4e-84 314.3 186 79.6
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 1.3e-83 313.5 223 70.9
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.6e-83 313.2 162 88.9
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 1.6e-83 313.2 176 83.0
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 1.6e-83 313.2 165 87.9
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 3.7e-83 312.0 167 86.2
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 4.8e-83 311.6 161 88.2
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.8e-82 309.7 180 80.0
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 2.4e-82 309.3 167 85.6
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 2.4e-82 309.3 167 85.0
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 3.1e-82 308.9 178 81.5
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 6.9e-82 307.8 172 86.6
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 1.0e-80 303.9 175 83.4
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 5.0e-80 301.6 180 77.2
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 6.5e-80 301.2 209 69.9
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 1.1e-79 300.4 181 76.2
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 1.1e-79 300.4 205 72.2
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 1.4e-79 300.1 162 85.8
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 2.5e-79 299.3 218 67.0
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 2.5e-79 299.3 218 67.0
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 3.2e-79 298.9 207 69.6
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 4.2e-79 298.5 218 67.0
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 4.2e-79 298.5 218 67.0
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 4.2e-79 298.5 218 67.0
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 4.2e-79 298.5 199 69.8
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 4.2e-79 298.5 208 70.7
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 7.2e-79 297.7 161 89.4
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 1.2e-78 297.0 218 67.0
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 1.2e-78 297.0 198 76.8
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 3.6e-78 295.4 157 84.1
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 1.8e-77 293.1 202 67.8
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.4e-74 282.7 168 80.4
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 9.1e-74 280.8 170 78.8
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 2.2e-72 276.2 169 78.7
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 3.8e-72 275.4 187 72.2
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 7.4e-68 261.2 177 75.7
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 2.4e-66 256.1 143 83.2
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 2.4e-66 256.1 181 64.6
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 5.3e-66 255.0 167 72.5
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.8e-61 240.0 128 87.5
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 1.5e-60 236.9 134 81.3
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 7.5e-60 234.6 224 57.6
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 3.1e-58 229.2 155 65.8
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 8.8e-53 211.1 110 87.3
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 9.5e-47 191.0 125 68.8
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 1.6e-46 190.3 172 60.5
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 1.2e-41 174.1 185 50.3
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 4.6e-33 145.6 193 43.0
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 3.0e-32 142.9 113 61.9
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 4.3e-31 139.0 201 44.8
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 3.0e-16 89.7 42 95.2
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 2.5e-15 86.7 47 80.9
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 8.1e-06 55.1 45 57.8


User provided reference genes

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