Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.09G340200 Theobroma cacao HOM05D004188 ORTHO05D004445 6.3e-32 141.4 162 100.0
Gohir.A05G102500 Gossypium hirsutum HOM05D004188 ORTHO05D004445 9.4e-20 100.9 133 63.2
Duzib150G1311 Durio zibethinus HOM05D004188 ORTHO05D004445 1.4e-18 97.1 163 50.9
Duzib168G0960 Durio zibethinus HOM05D004188 ORTHO05D004445 4.0e-18 95.5 163 41.7
Gohir.D05G102200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.2e-16 89.7 133 49.6
Duzib170G0015 Durio zibethinus HOM05D004188 ORTHO05D004445 2.4e-15 86.3 91 53.8
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.7e-14 82.8 91 52.7
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 2.7e-14 82.8 91 52.7
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 7.7e-14 81.3 91 51.6
TAR629G0463 Trochodendron aralioides HOM05D004188 ORTHO05D004445 2.3e-10 69.7 92 64.1
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 2.0e-09 66.6 85 44.7
Nn2g13093 Nelumbo nucifera HOM05D004188 ORTHO05D004445 2.6e-09 66.2 92 67.4
Ciclev10029471m.g Citrus clementina HOM05D004188 ORTHO05D004445 7.5e-09 64.7 73 54.8
TAR633G2264 Trochodendron aralioides HOM05D004188 ORTHO05D004445 7.5e-09 64.7 90 61.1
CANSAT54G2412 Cannabis sativa HOM05D004188 ORTHO05D004445 9.8e-09 64.3 86 44.2
Gorai.009G106500 Gossypium raimondii HOM05D004188 ORTHO05D004445 2.8e-08 62.8 65 58.5
FAN16G2082 Fragaria x ananassa HOM05D004188 ORTHO05D004445 3.7e-08 62.4 72 45.8
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 3.7e-08 62.4 89 43.8
PGR119G2389 Punica granatum HOM05D015476 ORTHO05D004445 3.7e-08 62.4 71 60.6
Atru.chr3.3633 Acer truncatum HOM05D004188 ORTHO05D004445 6.3e-08 61.6 72 69.4
Oeu030181.1 Olea europaea HOM05D004188 ORTHO05D004445 1.1e-07 60.8 85 40.0
Cpa.g.sc216.12 Carica papaya HOM05D004188 ORTHO05D004445 1.4e-07 60.5 70 74.3
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 1.4e-07 60.5 80 43.8
Oeu001268.1 Olea europaea HOM05D004188 ORTHO05D004445 1.4e-07 60.5 77 42.9
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 2.4e-07 59.7 31 87.1
FAN25G0660 Fragaria x ananassa HOM05D004188 ORTHO05D004445 2.4e-07 59.7 99 40.4
Potri.004G210300 Populus trichocarpa HOM05D004188 ORTHO05D004445 2.4e-07 59.7 93 47.3
Potri.009G013500 Populus trichocarpa HOM05D004188 ORTHO05D004445 2.4e-07 59.7 32 87.5
CiPaw.14G080400 Carya illinoinensis HOM05D004188 ORTHO05D004445 7.0e-07 58.2 31 83.9
Prupe.6G101100 Prunus persica HOM05D004188 ORTHO05D004445 7.0e-07 58.2 71 47.9
Manes.11G144800 Manihot esculenta HOM05D004188 ORTHO05D004445 1.2e-06 57.4 81 44.4
Sabra09G0008000 Salix brachista HOM05D004188 ORTHO05D004445 1.2e-06 57.4 82 45.1
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 1.6e-06 57.0 73 47.9
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 1.6e-06 57.0 31 83.9
Sabra04G0141900 Salix brachista HOM05D004188 ORTHO05D004445 2.7e-06 56.2 32 81.2
FvH4_3g32420 Fragaria vesca HOM05D004188 ORTHO05D004445 3.5e-06 55.8 31 83.9
FAN21G0748 Fragaria x ananassa HOM05D004188 ORTHO05D004445 3.5e-06 55.8 31 83.9
Oeu002868.1 Olea europaea HOM05D004188 ORTHO05D004445 4.5e-06 55.5 85 42.4
FAN11G3469 Fragaria x ananassa HOM05D004188 ORTHO05D004445 5.9e-06 55.1 68 44.1
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 7.7e-06 54.7 73 43.8


User provided reference genes

Program Settings